RNA–Protein interactions for RNA: ENST00000458499.5

VGLL4-215, Transcript of vestigial like family member 4, humanhuman

TSL 3

Gene VGLL4, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-215ENST00000458499 NISCHQ9Y2I1 1504 aa34.29■■■■□ 3.08
VGLL4-215ENST00000458499 CCDC180Q9P1Z9 1646 aa30.51■■■□□ 2.48
VGLL4-215ENST00000458499 ABCC9O60706 1549 aa30.21■■■□□ 2.43
VGLL4-215ENST00000458499 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
VGLL4-215ENST00000458499 DCAF8L2P0C7V8 631 aa28.83■■■□□ 2.21
VGLL4-215ENST00000458499 NACADO15069 1562 aa28.79■■■□□ 2.2
VGLL4-215ENST00000458499 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
VGLL4-215ENST00000458499 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.15
VGLL4-215ENST00000458499 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
VGLL4-215ENST00000458499 PABPN1Q86U42 306 aaKnown RBP eCLIP28.23■■■□□ 2.11
VGLL4-215ENST00000458499 UNC13AQ9UPW8 1703 aa28.17■■■□□ 2.1
VGLL4-215ENST00000458499 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
VGLL4-215ENST00000458499 DNAJC5BQ9UF47 199 aa27.98■■■□□ 2.07
VGLL4-215ENST00000458499 SCRIBQ14160 1630 aa27.91■■■□□ 2.06
VGLL4-215ENST00000458499 SHROOM4Q9ULL8 1493 aa27.69■■■□□ 2.02
VGLL4-215ENST00000458499 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
VGLL4-215ENST00000458499 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
VGLL4-215ENST00000458499 CECR2Q9BXF3 1484 aa27.15■■□□□ 1.94
VGLL4-215ENST00000458499 SMARCA4P51532 1647 aa26.64■■□□□ 1.85
VGLL4-215ENST00000458499 NCAPD3P42695 1498 aa26.6■■□□□ 1.85
VGLL4-215ENST00000458499 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
VGLL4-215ENST00000458499 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
VGLL4-215ENST00000458499 SMARCA2P51531 1590 aa26.51■■□□□ 1.83
VGLL4-215ENST00000458499 MROH2BQ7Z745 1585 aa26.44■■□□□ 1.82
VGLL4-215ENST00000458499 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
VGLL4-215ENST00000458499 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
VGLL4-215ENST00000458499 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
VGLL4-215ENST00000458499 WIZO95785 1651 aa26.12■■□□□ 1.77
VGLL4-215ENST00000458499 NESP48681 1621 aa26.06■■□□□ 1.76
VGLL4-215ENST00000458499 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
VGLL4-215ENST00000458499 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
VGLL4-215ENST00000458499 LAMC3Q9Y6N6 1575 aa25.9■■□□□ 1.74
VGLL4-215ENST00000458499 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.72
VGLL4-215ENST00000458499 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
VGLL4-215ENST00000458499 CUX2O14529 1486 aa25.82■■□□□ 1.72
VGLL4-215ENST00000458499 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
VGLL4-215ENST00000458499 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
VGLL4-215ENST00000458499 THOC2Q8NI27 1593 aaKnown RBP25.67■■□□□ 1.7
VGLL4-215ENST00000458499 CFTRP13569 1480 aa25.61■■□□□ 1.69
VGLL4-215ENST00000458499 CCDC88BA6NC98 1476 aa25.55■■□□□ 1.68
VGLL4-215ENST00000458499 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
VGLL4-215ENST00000458499 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
VGLL4-215ENST00000458499 CEP164Q9UPV0 1460 aa25.51■■□□□ 1.67
VGLL4-215ENST00000458499 WDR62O43379 1518 aa25.43■■□□□ 1.66
VGLL4-215ENST00000458499 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
VGLL4-215ENST00000458499 URB2Q14146 1524 aaKnown RBP25.29■■□□□ 1.64
VGLL4-215ENST00000458499 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
VGLL4-215ENST00000458499 PRDM2Q13029 1718 aa25.28■■□□□ 1.64
VGLL4-215ENST00000458499 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
VGLL4-215ENST00000458499 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
VGLL4-215ENST00000458499 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
VGLL4-215ENST00000458499 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
VGLL4-215ENST00000458499 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
VGLL4-215ENST00000458499 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
VGLL4-215ENST00000458499 CUX1P39880 1505 aa24.81■■□□□ 1.56
VGLL4-215ENST00000458499 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
VGLL4-215ENST00000458499 RAD54L2Q9Y4B4 1467 aa24.78■■□□□ 1.56
VGLL4-215ENST00000458499 FGD5Q6ZNL6 1462 aa24.77■■□□□ 1.56
VGLL4-215ENST00000458499 SOGA1O94964 1423 aa24.77■■□□□ 1.56
VGLL4-215ENST00000458499 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
VGLL4-215ENST00000458499 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
VGLL4-215ENST00000458499 AQRO60306 1485 aaKnown RBP eCLIP24.75■■□□□ 1.551e-7■■■■□ 24.1
VGLL4-215ENST00000458499 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
VGLL4-215ENST00000458499 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
VGLL4-215ENST00000458499 WDR97A6NE52 1622 aa24.55■■□□□ 1.52
VGLL4-215ENST00000458499 FBLN2P98095 1184 aa24.54■■□□□ 1.52
VGLL4-215ENST00000458499 SYNJ1O43426 1573 aa24.51■■□□□ 1.51
VGLL4-215ENST00000458499 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
VGLL4-215ENST00000458499 TOP2BQ02880 1626 aa24.5■■□□□ 1.51
VGLL4-215ENST00000458499 ABCA10Q8WWZ4 1543 aa24.5■■□□□ 1.51
VGLL4-215ENST00000458499 GRIN2BQ13224 1484 aa24.49■■□□□ 1.51
VGLL4-215ENST00000458499 BIVM-ERCC5R4GMW8 1640 aa24.48■■□□□ 1.51
VGLL4-215ENST00000458499 CHD1O14646 1710 aa24.47■■□□□ 1.51
VGLL4-215ENST00000458499 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
VGLL4-215ENST00000458499 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
VGLL4-215ENST00000458499 MAGI1Q96QZ7 1491 aaPredicted RBP24.44■■□□□ 1.5
VGLL4-215ENST00000458499 CHMP7Q8WUX9 453 aaPredicted RBP24.41■■□□□ 1.5
VGLL4-215ENST00000458499 ABCA5Q8WWZ7 1642 aa24.4■■□□□ 1.5
VGLL4-215ENST00000458499 PBRM1Q86U86 1689 aa24.37■■□□□ 1.49
VGLL4-215ENST00000458499 SYNJ2O15056 1496 aa24.36■■□□□ 1.49
VGLL4-215ENST00000458499 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
VGLL4-215ENST00000458499 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
VGLL4-215ENST00000458499 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
VGLL4-215ENST00000458499 ARHGEF11O15085 1522 aa24.33■■□□□ 1.49
VGLL4-215ENST00000458499 CLASP1Q7Z460 1538 aa24.24■■□□□ 1.47
VGLL4-215ENST00000458499 ADAMTS12P58397 1594 aa24.2■■□□□ 1.46
VGLL4-215ENST00000458499 ERICH3Q5RHP9 1530 aa24.19■■□□□ 1.46
VGLL4-215ENST00000458499 GRIN2AQ12879 1464 aa24.18■■□□□ 1.46
VGLL4-215ENST00000458499 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
VGLL4-215ENST00000458499 CYB5RLQ6IPT4 315 aa24.16■■□□□ 1.46
VGLL4-215ENST00000458499 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
VGLL4-215ENST00000458499 NUP160Q12769 1436 aa24.08■■□□□ 1.44
VGLL4-215ENST00000458499 KIF27Q86VH2 1401 aa24.08■■□□□ 1.44
VGLL4-215ENST00000458499 CEP170Q5SW79 1584 aa24.06■■□□□ 1.44
VGLL4-215ENST00000458499 IGF1RP08069 1367 aa24.03■■□□□ 1.44
VGLL4-215ENST00000458499 ERCC6L2Q5T890 1561 aa23.91■■□□□ 1.42
VGLL4-215ENST00000458499 CUL7Q14999 1698 aa23.89■■□□□ 1.42
VGLL4-215ENST00000458499 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
VGLL4-215ENST00000458499 CARMIL1Q5VZK9 1371 aa23.88■■□□□ 1.41
VGLL4-215ENST00000458499 JPH4Q96JJ6 628 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms