RNA–Protein interactions for RNA: ENST00000445411.5

VGLL4-213, Transcript of vestigial like family member 4, humanhuman

TSL 5

Gene VGLL4, Length 726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-213ENST00000445411 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
VGLL4-213ENST00000445411 ABCC9O60706 1549 aa21.14■□□□□ 0.98
VGLL4-213ENST00000445411 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
VGLL4-213ENST00000445411 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
VGLL4-213ENST00000445411 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
VGLL4-213ENST00000445411 NACADO15069 1562 aa19.73■□□□□ 0.75
VGLL4-213ENST00000445411 MYO15BQ96JP2 1530 aa19.63■□□□□ 0.73
VGLL4-213ENST00000445411 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
VGLL4-213ENST00000445411 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
VGLL4-213ENST00000445411 UNC13AQ9UPW8 1703 aa19.47■□□□□ 0.71
VGLL4-213ENST00000445411 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
VGLL4-213ENST00000445411 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
VGLL4-213ENST00000445411 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
VGLL4-213ENST00000445411 DNAJC5Q9H3Z4 198 aa19.13■□□□□ 0.65
VGLL4-213ENST00000445411 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
VGLL4-213ENST00000445411 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
VGLL4-213ENST00000445411 CC2D2AQ9P2K1 1620 aa19.07■□□□□ 0.64
VGLL4-213ENST00000445411 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
VGLL4-213ENST00000445411 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
VGLL4-213ENST00000445411 CUX2O14529 1486 aa18.42■□□□□ 0.54
VGLL4-213ENST00000445411 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
VGLL4-213ENST00000445411 NCAPD3P42695 1498 aa18.25■□□□□ 0.51
VGLL4-213ENST00000445411 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
VGLL4-213ENST00000445411 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
VGLL4-213ENST00000445411 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
VGLL4-213ENST00000445411 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
VGLL4-213ENST00000445411 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
VGLL4-213ENST00000445411 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
VGLL4-213ENST00000445411 PEG3Q9GZU2 1588 aa18.06■□□□□ 0.48
VGLL4-213ENST00000445411 NESP48681 1621 aa17.99■□□□□ 0.47
VGLL4-213ENST00000445411 THOC2Q8NI27 1593 aaKnown RBP17.99■□□□□ 0.47
VGLL4-213ENST00000445411 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
VGLL4-213ENST00000445411 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
VGLL4-213ENST00000445411 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
VGLL4-213ENST00000445411 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
VGLL4-213ENST00000445411 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
VGLL4-213ENST00000445411 CADPSQ9ULU8 1353 aa17.67■□□□□ 0.42
VGLL4-213ENST00000445411 WIZO95785 1651 aa17.67■□□□□ 0.42
VGLL4-213ENST00000445411 PDS5BQ9NTI5 1447 aa17.66■□□□□ 0.42
VGLL4-213ENST00000445411 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
VGLL4-213ENST00000445411 CFTRP13569 1480 aa17.51■□□□□ 0.39
VGLL4-213ENST00000445411 WDR62O43379 1518 aa17.51■□□□□ 0.39
VGLL4-213ENST00000445411 MRC2Q9UBG0 1479 aa17.5■□□□□ 0.39
VGLL4-213ENST00000445411 RIMBP3CA6NJZ7 1639 aa17.44■□□□□ 0.38
VGLL4-213ENST00000445411 RIMBP3BA6NNM3 1639 aa17.44■□□□□ 0.38
VGLL4-213ENST00000445411 RIMBP3Q9UFD9 1639 aa17.44■□□□□ 0.38
VGLL4-213ENST00000445411 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
VGLL4-213ENST00000445411 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
VGLL4-213ENST00000445411 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
VGLL4-213ENST00000445411 OSCARQ8IYS5 282 aa17.33■□□□□ 0.36
VGLL4-213ENST00000445411 ARHGEF11O15085 1522 aa17.27■□□□□ 0.36
VGLL4-213ENST00000445411 URB2Q14146 1524 aaKnown RBP17.23■□□□□ 0.35
VGLL4-213ENST00000445411 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
VGLL4-213ENST00000445411 ABCC8Q09428 1581 aa17.17■□□□□ 0.34
VGLL4-213ENST00000445411 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
VGLL4-213ENST00000445411 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
VGLL4-213ENST00000445411 TOPBP1Q92547 1522 aa17.09■□□□□ 0.33
VGLL4-213ENST00000445411 ARAP1Q96P48 1450 aa17.07■□□□□ 0.32
VGLL4-213ENST00000445411 AEBP2Q6ZN18 517 aaPredicted RBP17.07■□□□□ 0.32
VGLL4-213ENST00000445411 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
VGLL4-213ENST00000445411 CYB5RLQ6IPT4 315 aa17.05■□□□□ 0.32
VGLL4-213ENST00000445411 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
VGLL4-213ENST00000445411 CHD1O14646 1710 aa17.01■□□□□ 0.31
VGLL4-213ENST00000445411 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
VGLL4-213ENST00000445411 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
VGLL4-213ENST00000445411 TARBP1Q13395 1621 aaKnown RBP16.93■□□□□ 0.3
VGLL4-213ENST00000445411 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
VGLL4-213ENST00000445411 SOGA1O94964 1423 aa16.87■□□□□ 0.29
VGLL4-213ENST00000445411 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
VGLL4-213ENST00000445411 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.293e-7■■■■■ 36.6
VGLL4-213ENST00000445411 CUX1P39880 1505 aa16.84■□□□□ 0.29
VGLL4-213ENST00000445411 FGD5Q6ZNL6 1462 aa16.82■□□□□ 0.28
VGLL4-213ENST00000445411 RAD54L2Q9Y4B4 1467 aa16.81■□□□□ 0.28
VGLL4-213ENST00000445411 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.28
VGLL4-213ENST00000445411 CLASP1Q7Z460 1538 aa16.73■□□□□ 0.27
VGLL4-213ENST00000445411 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
VGLL4-213ENST00000445411 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
VGLL4-213ENST00000445411 MAGI1Q96QZ7 1491 aaPredicted RBP16.72■□□□□ 0.27
VGLL4-213ENST00000445411 FBLN2P98095 1184 aa16.71■□□□□ 0.27
VGLL4-213ENST00000445411 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
VGLL4-213ENST00000445411 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
VGLL4-213ENST00000445411 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
VGLL4-213ENST00000445411 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
VGLL4-213ENST00000445411 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
VGLL4-213ENST00000445411 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
VGLL4-213ENST00000445411 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
VGLL4-213ENST00000445411 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
VGLL4-213ENST00000445411 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
VGLL4-213ENST00000445411 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
VGLL4-213ENST00000445411 ILDR1Q86SU0 546 aaPredicted RBP16.53■□□□□ 0.24
VGLL4-213ENST00000445411 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
VGLL4-213ENST00000445411 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
VGLL4-213ENST00000445411 KIF13AQ9H1H9 1805 aa16.49■□□□□ 0.23
VGLL4-213ENST00000445411 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
VGLL4-213ENST00000445411 ERCC6L2Q5T890 1561 aa16.48■□□□□ 0.23
VGLL4-213ENST00000445411 NUP160Q12769 1436 aa16.47■□□□□ 0.23
VGLL4-213ENST00000445411 ADAMTS12P58397 1594 aa16.45■□□□□ 0.22
VGLL4-213ENST00000445411 CEP170Q5SW79 1584 aa16.37■□□□□ 0.21
VGLL4-213ENST00000445411 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
VGLL4-213ENST00000445411 IGF1RP08069 1367 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms