RNA–Protein interactions for RNA: ENST00000437722.1

VGLL4-212, Transcript of vestigial like family member 4, humanhuman

TSL 3

Gene VGLL4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-212ENST00000437722 NISCHQ9Y2I1 1504 aa38.6■■■■□ 3.77
VGLL4-212ENST00000437722 CCDC180Q9P1Z9 1646 aa34.76■■■■□ 3.15
VGLL4-212ENST00000437722 ABCC9O60706 1549 aa34.58■■■■□ 3.13
VGLL4-212ENST00000437722 RB1CC1Q8TDY2 1594 aa33■■■□□ 2.87
VGLL4-212ENST00000437722 NACADO15069 1562 aa32.75■■■□□ 2.83
VGLL4-212ENST00000437722 DCAF8L2P0C7V8 631 aa32.44■■■□□ 2.78
VGLL4-212ENST00000437722 UNC13AQ9UPW8 1703 aa32.38■■■□□ 2.77
VGLL4-212ENST00000437722 MYO15BQ96JP2 1530 aa32.29■■■□□ 2.76
VGLL4-212ENST00000437722 DNAJC5BQ9UF47 199 aa32.26■■■□□ 2.75
VGLL4-212ENST00000437722 PABPN1Q86U42 306 aaKnown RBP eCLIP32.1■■■□□ 2.73
VGLL4-212ENST00000437722 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
VGLL4-212ENST00000437722 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
VGLL4-212ENST00000437722 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
VGLL4-212ENST00000437722 SCRIBQ14160 1630 aa31.64■■■□□ 2.65
VGLL4-212ENST00000437722 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
VGLL4-212ENST00000437722 CC2D2AQ9P2K1 1620 aa31.3■■■□□ 2.6
VGLL4-212ENST00000437722 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
VGLL4-212ENST00000437722 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.57
VGLL4-212ENST00000437722 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
VGLL4-212ENST00000437722 NCAPD3P42695 1498 aa30.16■■■□□ 2.42
VGLL4-212ENST00000437722 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
VGLL4-212ENST00000437722 SMARCA2P51531 1590 aa30.08■■■□□ 2.41
VGLL4-212ENST00000437722 HMGXB3Q12766 1538 aa30.04■■■□□ 2.4
VGLL4-212ENST00000437722 BAZ1AQ9NRL2 1556 aaPredicted RBP30■■■□□ 2.39
VGLL4-212ENST00000437722 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
VGLL4-212ENST00000437722 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
VGLL4-212ENST00000437722 PEG3Q9GZU2 1588 aa29.86■■■□□ 2.37
VGLL4-212ENST00000437722 CUX2O14529 1486 aa29.8■■■□□ 2.36
VGLL4-212ENST00000437722 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
VGLL4-212ENST00000437722 NESP48681 1621 aa29.72■■■□□ 2.35
VGLL4-212ENST00000437722 DNAJC5Q9H3Z4 198 aa29.61■■■□□ 2.33
VGLL4-212ENST00000437722 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
VGLL4-212ENST00000437722 THOC2Q8NI27 1593 aaKnown RBP29.51■■■□□ 2.31
VGLL4-212ENST00000437722 KIF21AQ7Z4S6 1674 aa29.48■■■□□ 2.31
VGLL4-212ENST00000437722 WIZO95785 1651 aa29.46■■■□□ 2.31
VGLL4-212ENST00000437722 PDS5BQ9NTI5 1447 aa29.32■■■□□ 2.28
VGLL4-212ENST00000437722 CADPSQ9ULU8 1353 aa29.23■■■□□ 2.27
VGLL4-212ENST00000437722 MRC2Q9UBG0 1479 aa29.11■■■□□ 2.25
VGLL4-212ENST00000437722 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
VGLL4-212ENST00000437722 WDR62O43379 1518 aa29.07■■■□□ 2.24
VGLL4-212ENST00000437722 TOP2AP11388 1531 aaKnown RBP29.07■■■□□ 2.24
VGLL4-212ENST00000437722 CEP164Q9UPV0 1460 aa29.02■■■□□ 2.24
VGLL4-212ENST00000437722 FANCD2Q9BXW9 1451 aa28.96■■■□□ 2.23
VGLL4-212ENST00000437722 CFTRP13569 1480 aa28.94■■■□□ 2.22
VGLL4-212ENST00000437722 PRDM2Q13029 1718 aa28.9■■■□□ 2.22
VGLL4-212ENST00000437722 URB2Q14146 1524 aaKnown RBP28.73■■■□□ 2.19
VGLL4-212ENST00000437722 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
VGLL4-212ENST00000437722 TOPBP1Q92547 1522 aa28.43■■■□□ 2.14
VGLL4-212ENST00000437722 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
VGLL4-212ENST00000437722 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
VGLL4-212ENST00000437722 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
VGLL4-212ENST00000437722 ZNF608Q9ULD9 1512 aaPredicted RBP28.35■■■□□ 2.13
VGLL4-212ENST00000437722 ABCC8Q09428 1581 aa28.35■■■□□ 2.13
VGLL4-212ENST00000437722 OSCARQ8IYS5 282 aa28.33■■■□□ 2.13
VGLL4-212ENST00000437722 EIF4G3O43432 1585 aaKnown RBP28.31■■■□□ 2.12
VGLL4-212ENST00000437722 TARBP1Q13395 1621 aaKnown RBP28.21■■■□□ 2.11
VGLL4-212ENST00000437722 POLA1P09884 1462 aaPredicted RBP28.14■■■□□ 2.09
VGLL4-212ENST00000437722 RIMBP3CA6NJZ7 1639 aa28.14■■■□□ 2.09
VGLL4-212ENST00000437722 RIMBP3BA6NNM3 1639 aa28.14■■■□□ 2.09
VGLL4-212ENST00000437722 RIMBP3Q9UFD9 1639 aa28.14■■■□□ 2.09
VGLL4-212ENST00000437722 CHD1O14646 1710 aa28.13■■■□□ 2.09
VGLL4-212ENST00000437722 AQRO60306 1485 aaKnown RBP eCLIP28.06■■■□□ 2.083e-7■■■■■ 32.1
VGLL4-212ENST00000437722 ARHGEF11O15085 1522 aa28.01■■■□□ 2.07
VGLL4-212ENST00000437722 RAD54L2Q9Y4B4 1467 aa28.01■■■□□ 2.07
VGLL4-212ENST00000437722 FGD5Q6ZNL6 1462 aa27.98■■■□□ 2.07
VGLL4-212ENST00000437722 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
VGLL4-212ENST00000437722 CUX1P39880 1505 aa27.96■■■□□ 2.07
VGLL4-212ENST00000437722 SOGA1O94964 1423 aa27.95■■■□□ 2.07
VGLL4-212ENST00000437722 TDRD9Q8NDG6 1382 aaKnown RBP27.88■■■□□ 2.05
VGLL4-212ENST00000437722 SNAPC4Q5SXM2 1469 aa27.84■■■□□ 2.05
VGLL4-212ENST00000437722 FBLN2P98095 1184 aa27.84■■■□□ 2.05
VGLL4-212ENST00000437722 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
VGLL4-212ENST00000437722 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
VGLL4-212ENST00000437722 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.04
VGLL4-212ENST00000437722 GRIN2BQ13224 1484 aa27.75■■■□□ 2.03
VGLL4-212ENST00000437722 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
VGLL4-212ENST00000437722 SYNJ1O43426 1573 aa27.72■■■□□ 2.03
VGLL4-212ENST00000437722 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
VGLL4-212ENST00000437722 ABCA5Q8WWZ7 1642 aa27.68■■■□□ 2.02
VGLL4-212ENST00000437722 CYB5RLQ6IPT4 315 aa27.67■■■□□ 2.02
VGLL4-212ENST00000437722 SYNJ2O15056 1496 aa27.66■■■□□ 2.02
VGLL4-212ENST00000437722 GAPVD1Q14C86 1478 aa27.65■■■□□ 2.02
VGLL4-212ENST00000437722 ABCA10Q8WWZ4 1543 aa27.65■■■□□ 2.02
VGLL4-212ENST00000437722 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
VGLL4-212ENST00000437722 BIVM-ERCC5R4GMW8 1640 aa27.6■■■□□ 2.01
VGLL4-212ENST00000437722 TOP2BQ02880 1626 aa27.56■■■□□ 2
VGLL4-212ENST00000437722 WRNQ14191 1432 aaPredicted RBP eCLIP27.51■■□□□ 1.99
VGLL4-212ENST00000437722 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
VGLL4-212ENST00000437722 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
VGLL4-212ENST00000437722 TRHP20396 242 aaPredicted RBP27.38■■□□□ 1.97
VGLL4-212ENST00000437722 CEP170Q5SW79 1584 aa27.35■■□□□ 1.97
VGLL4-212ENST00000437722 ERICH3Q5RHP9 1530 aa27.33■■□□□ 1.97
VGLL4-212ENST00000437722 FHAD1B1AJZ9 1412 aa27.29■■□□□ 1.96
VGLL4-212ENST00000437722 NUP160Q12769 1436 aa27.29■■□□□ 1.96
VGLL4-212ENST00000437722 ERCC6L2Q5T890 1561 aa27.27■■□□□ 1.96
VGLL4-212ENST00000437722 SHROOM2Q13796 1616 aa27.26■■□□□ 1.95
VGLL4-212ENST00000437722 RUSC2Q8N2Y8 1516 aa27.1■■□□□ 1.93
VGLL4-212ENST00000437722 CUL7Q14999 1698 aa27.01■■□□□ 1.92
VGLL4-212ENST00000437722 PRG4Q92954 1404 aaPredicted RBP27■■□□□ 1.91
VGLL4-212ENST00000437722 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms