Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 CHID1-223ENST00000534207 1171 ntTSL 516.57■□□□□ 0.243e-11■■□□□ 11.4
DDX59Q5T1V6 COL9A3-214ENST00000490398 496 ntTSL 416.41■□□□□ 0.223e-11■■□□□ 11.4
DDX59Q5T1V6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.213e-11■■□□□ 11.4
DDX59Q5T1V6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.131e-6■■□□□ 11.4
DDX59Q5T1V6 COL9A3-212ENST00000481800 548 ntTSL 415.85■□□□□ 0.133e-11■■□□□ 11.4
DDX59Q5T1V6 APOC4-APOC2-201ENST00000585685 1829 ntTSL 515.83■□□□□ 0.123e-7■■□□□ 11.4
DDX59Q5T1V6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.093e-11■■□□□ 11.4
DDX59Q5T1V6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.92□□□□□ -0.023e-11■■□□□ 11.4
DDX59Q5T1V6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.183e-7■■□□□ 11.4
DDX59Q5T1V6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.78□□□□□ -0.23e-7■■□□□ 11.4
DDX59Q5T1V6 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.64□□□□□ -0.233e-7■■□□□ 11.4
DDX59Q5T1V6 COL9A3-209ENST00000469852 901 ntTSL 313.63□□□□□ -0.233e-11■■□□□ 11.4
DDX59Q5T1V6 SF3A2-207ENST00000592839 724 ntTSL 213.36□□□□□ -0.273e-7■■□□□ 11.4
DDX59Q5T1V6 SF3A2-202ENST00000586396 543 ntAPPRIS ALT2 TSL 313.36□□□□□ -0.273e-7■■□□□ 11.4
DDX59Q5T1V6 ABAT-212ENST00000566590 2423 ntTSL 1 (best)13.36□□□□□ -0.273e-7■■□□□ 11.4
DDX59Q5T1V6 SF3A2-204ENST00000589118 759 ntTSL 213.25□□□□□ -0.293e-7■■□□□ 11.4
DDX59Q5T1V6 SFXN5-204ENST00000416579 895 ntTSL 313.19□□□□□ -0.33e-7■■□□□ 11.4
DDX59Q5T1V6 SFXN5-203ENST00000411783 915 ntTSL 313.1□□□□□ -0.313e-7■■□□□ 11.4
DDX59Q5T1V6 SF3A2-206ENST00000592314 885 ntTSL 513.08□□□□□ -0.323e-7■■□□□ 11.4
DDX59Q5T1V6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.331e-6■■□□□ 11.4
DDX59Q5T1V6 SF3A2-205ENST00000590034 573 ntTSL 312.34□□□□□ -0.433e-7■■□□□ 11.4
DDX59Q5T1V6 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.29□□□□□ -0.443e-11■■□□□ 11.4
DDX59Q5T1V6 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.463e-11■■□□□ 11.4
DDX59Q5T1V6 SFXN5-212ENST00000475630 422 ntTSL 312.14□□□□□ -0.473e-7■■□□□ 11.4
DDX59Q5T1V6 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC12.1□□□□□ -0.473e-11■■□□□ 11.4
DDX59Q5T1V6 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.543e-11■■□□□ 11.4
DDX59Q5T1V6 SFXN5-206ENST00000450185 2975 ntTSL 211.55□□□□□ -0.563e-7■■□□□ 11.4
DDX59Q5T1V6 SFXN5-201ENST00000272433 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.73e-7■■□□□ 11.4
DDX59Q5T1V6 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.733e-7■■□□□ 11.4
DDX59Q5T1V6 SFXN5-202ENST00000410065 840 ntTSL 1 (best) BASIC10.41□□□□□ -0.743e-7■■□□□ 11.4
DDX59Q5T1V6 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.783e-7■■□□□ 11.4
DDX59Q5T1V6 CHID1-210ENST00000526714 976 ntTSL 510.06□□□□□ -0.83e-11■■□□□ 11.4
DDX59Q5T1V6 APOC4-APOC2-202ENST00000589057 680 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.833e-7■■□□□ 11.4
DDX59Q5T1V6 SFXN5-205ENST00000442582 489 ntTSL 39.43□□□□□ -0.93e-7■■□□□ 11.4
DDX59Q5T1V6 CHID1-213ENST00000528521 323 ntTSL 58.83□□□□□ -13e-11■■□□□ 11.4
DDX59Q5T1V6 PRRC2A-210ENST00000483470 916 ntTSL 27.39□□□□□ -1.233e-11■■□□□ 11.4
DDX59Q5T1V6 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.3□□□□□ -1.243e-7■■□□□ 11.4
DDX59Q5T1V6 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.3□□□□□ -1.243e-7■■□□□ 11.4
DDX59Q5T1V6 SFXN5-217ENST00000485057 447 ntTSL 55.78□□□□□ -1.483e-7■■□□□ 11.4
DDX59Q5T1V6 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.54□□□□□ -1.523e-7■■□□□ 11.4
DDX59Q5T1V6 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.643e-7■■□□□ 11.4
DDX59Q5T1V6 SFXN5-216ENST00000484123 351 ntTSL 23.2□□□□□ -1.93e-7■■□□□ 11.4
DDX59Q5T1V6 SREBF1-206ENST00000423161 1058 ntTSL 316.49■□□□□ 0.232e-7■■□□□ 11.4
DDX59Q5T1V6 SREBF1-222ENST00000583732 580 ntTSL 413.47□□□□□ -0.252e-7■■□□□ 11.4
DDX59Q5T1V6 SREBF1-217ENST00000577897 536 ntTSL 413.07□□□□□ -0.322e-7■■□□□ 11.4
DDX59Q5T1V6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.32■□□□□ 0.043e-6■■□□□ 11.4
DDX59Q5T1V6 C2orf48-202ENST00000619640 480 ntTSL 1 (best)14.03□□□□□ -0.163e-6■■□□□ 11.4
DDX59Q5T1V6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.01□□□□□ -0.173e-6■■□□□ 11.4
DDX59Q5T1V6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.244e-7■■□□□ 11.4
DDX59Q5T1V6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.85■□□□□ 0.134e-7■■□□□ 11.4
DDX59Q5T1V6 TRIP10-203ENST00000595305 2068 ntTSL 215.09■□□□□ 0.014e-7■■□□□ 11.4
DDX59Q5T1V6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.08■□□□□ 04e-7■■□□□ 11.4
DDX59Q5T1V6 TRIP10-212ENST00000600677 2022 ntTSL 514.62□□□□□ -0.074e-7■■□□□ 11.4
DDX59Q5T1V6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.43□□□□□ -0.14e-7■■□□□ 11.4
DDX59Q5T1V6 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)13.79□□□□□ -0.23e-9■□□□□ 11.3
DDX59Q5T1V6 BAX-210ENST00000513217 869 ntTSL 212.4□□□□□ -0.423e-6■□□□□ 11.3
DDX59Q5T1V6 ILF3-218ENST00000590009 953 ntTSL 512.67□□□□□ -0.381e-7■□□□□ 11.2
DDX59Q5T1V6 F7-203ENST00000444337 564 ntTSL 517.97■□□□□ 0.473e-8■□□□□ 11.2
DDX59Q5T1V6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.143e-8■□□□□ 11.2
DDX59Q5T1V6 F7-206ENST00000541084 2873 ntTSL 2 BASIC11.46□□□□□ -0.573e-8■□□□□ 11.2
DDX59Q5T1V6 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.623e-8■□□□□ 11.2
DDX59Q5T1V6 DOT1L-203ENST00000452696 624 ntTSL 313.34□□□□□ -0.274e-9■□□□□ 11.1
DDX59Q5T1V6 SRRM2-221ENST00000574866 638 ntTSL 316.57■□□□□ 0.241e-30■□□□□ 11.1
DDX59Q5T1V6 ZNF276-209ENST00000568295 2206 ntTSL 224.65■■□□□ 1.546e-10■□□□□ 11.1
DDX59Q5T1V6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.426e-10■□□□□ 11.1
DDX59Q5T1V6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.3■□□□□ 0.686e-10■□□□□ 11.1
DDX59Q5T1V6 ZNF276-203ENST00000561536 1947 ntTSL 218.29■□□□□ 0.526e-10■□□□□ 11.1
DDX59Q5T1V6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.29■□□□□ 0.046e-10■□□□□ 11.1
DDX59Q5T1V6 ZNF276-210ENST00000569426 436 ntTSL 315.19■□□□□ 0.026e-10■□□□□ 11.1
DDX59Q5T1V6 ZNF276-204ENST00000562530 1826 ntTSL 214.59□□□□□ -0.076e-10■□□□□ 11.1
DDX59Q5T1V6 ZNF276-205ENST00000563541 588 ntTSL 312.7□□□□□ -0.386e-10■□□□□ 11.1
DDX59Q5T1V6 ZNF276-207ENST00000564004 2845 ntTSL 212.44□□□□□ -0.426e-10■□□□□ 11.1
DDX59Q5T1V6 ZNF276-206ENST00000563983 3403 ntTSL 212.19□□□□□ -0.466e-10■□□□□ 11.1
DDX59Q5T1V6 ZYX-208ENST00000468083 1146 ntTSL 519.79■□□□□ 0.764e-9■□□□□ 11.1
DDX59Q5T1V6 ZYX-205ENST00000446634 926 ntTSL 516.86■□□□□ 0.294e-9■□□□□ 11.1
DDX59Q5T1V6 ZYX-204ENST00000436448 632 ntTSL 416.05■□□□□ 0.164e-9■□□□□ 11.1
DDX59Q5T1V6 ZYX-209ENST00000477373 504 ntTSL 410.19□□□□□ -0.784e-9■□□□□ 11.1
DDX59Q5T1V6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.8□□□□□ -0.041e-7■□□□□ 11
DDX59Q5T1V6 GATD1-207ENST00000526650 457 ntTSL 314.8□□□□□ -0.041e-7■□□□□ 11
DDX59Q5T1V6 GATD1-204ENST00000465313 446 ntTSL 314.44□□□□□ -0.11e-7■□□□□ 11
DDX59Q5T1V6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.89□□□□□ -0.191e-7■□□□□ 11
DDX59Q5T1V6 GATD1-208ENST00000528309 510 ntTSL 313.12□□□□□ -0.311e-7■□□□□ 11
DDX59Q5T1V6 GATD1-201ENST00000319863 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.611e-7■□□□□ 11
DDX59Q5T1V6 GATD1-202ENST00000354286 3973 ntTSL 510.28□□□□□ -0.761e-7■□□□□ 11
DDX59Q5T1V6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.055e-22■□□□□ 11
DDX59Q5T1V6 CERS4-207ENST00000558877 758 ntTSL 311.97□□□□□ -0.492e-8■□□□□ 11
DDX59Q5T1V6 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.635e-22■□□□□ 11
DDX59Q5T1V6 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.635e-22■□□□□ 11
DDX59Q5T1V6 SERPINA3-208ENST00000556968 1289 ntTSL 1 (best)9.9□□□□□ -0.825e-22■□□□□ 11
DDX59Q5T1V6 SERPINA3-206ENST00000555820 981 ntTSL 59.41□□□□□ -0.95e-22■□□□□ 11
DDX59Q5T1V6 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.985e-22■□□□□ 11
DDX59Q5T1V6 SERPINA3-205ENST00000485588 575 ntTSL 1 (best)8.26□□□□□ -1.095e-22■□□□□ 11
DDX59Q5T1V6 SERPINA3-207ENST00000556388 480 ntTSL 47.69□□□□□ -1.185e-22■□□□□ 11
DDX59Q5T1V6 LINC00963-205ENST00000444184 1887 ntTSL 1 (best)18.56■□□□□ 0.563e-7■□□□□ 11
DDX59Q5T1V6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.51■□□□□ 0.073e-7■□□□□ 11
DDX59Q5T1V6 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.28□□□□□ -0.283e-7■□□□□ 11
DDX59Q5T1V6 LINC00963-211ENST00000608369 961 ntTSL 5 BASIC10.39□□□□□ -0.753e-7■□□□□ 11
DDX59Q5T1V6 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC9.99□□□□□ -0.813e-7■□□□□ 11
DDX59Q5T1V6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 11e-10■□□□□ 11
DDX59Q5T1V6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.78■□□□□ 0.921e-10■□□□□ 11
Retrieved 100 of 7,289 protein–RNA pairs in 223.1 ms