RNA–Protein interactions for RNA: ENST00000592314.5

SF3A2-206, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 5

Gene SF3A2, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-206ENST00000592314 NISCHQ9Y2I1 1504 aa37.92■■■■□ 3.66
SF3A2-206ENST00000592314 ABCC9O60706 1549 aa34.4■■■■□ 3.1
SF3A2-206ENST00000592314 CCDC180Q9P1Z9 1646 aa34.18■■■■□ 3.06
SF3A2-206ENST00000592314 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
SF3A2-206ENST00000592314 DNAJC5BQ9UF47 199 aa32.53■■■□□ 2.8
SF3A2-206ENST00000592314 NACADO15069 1562 aa32.29■■■□□ 2.76
SF3A2-206ENST00000592314 UNC13AQ9UPW8 1703 aa32.06■■■□□ 2.72
SF3A2-206ENST00000592314 PABPN1Q86U42 306 aaKnown RBP eCLIP31.93■■■□□ 2.7
SF3A2-206ENST00000592314 DCAF8L2P0C7V8 631 aa31.92■■■□□ 2.7
SF3A2-206ENST00000592314 BICRAQ9NZM4 1560 aa31.79■■■□□ 2.68
SF3A2-206ENST00000592314 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
SF3A2-206ENST00000592314 ZCCHC6Q5VYS8 1495 aaKnown RBP31.4■■■□□ 2.62
SF3A2-206ENST00000592314 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
SF3A2-206ENST00000592314 SHROOM4Q9ULL8 1493 aa31.18■■■□□ 2.58
SF3A2-206ENST00000592314 SCRIBQ14160 1630 aa31.15■■■□□ 2.58
SF3A2-206ENST00000592314 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
SF3A2-206ENST00000592314 CECR2Q9BXF3 1484 aa30.99■■■□□ 2.55
SF3A2-206ENST00000592314 EIF4G1Q04637 1599 aaKnown RBP30.96■■■□□ 2.55
SF3A2-206ENST00000592314 DNAJC5Q9H3Z4 198 aa29.94■■■□□ 2.38
SF3A2-206ENST00000592314 NCAPD3P42695 1498 aa29.81■■■□□ 2.36
SF3A2-206ENST00000592314 ATAD2BQ9ULI0 1458 aa29.72■■■□□ 2.35
SF3A2-206ENST00000592314 CUX2O14529 1486 aa29.7■■■□□ 2.35
SF3A2-206ENST00000592314 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
SF3A2-206ENST00000592314 ERCC6Q03468 1493 aa29.64■■■□□ 2.34
SF3A2-206ENST00000592314 HMGXB3Q12766 1538 aa29.62■■■□□ 2.33
SF3A2-206ENST00000592314 SMARCA2P51531 1590 aa29.59■■■□□ 2.33
SF3A2-206ENST00000592314 NESP48681 1621 aa29.53■■■□□ 2.32
SF3A2-206ENST00000592314 BAZ1AQ9NRL2 1556 aaPredicted RBP29.42■■■□□ 2.3
SF3A2-206ENST00000592314 BAZ1BQ9UIG0 1483 aaKnown RBP29.39■■■□□ 2.3
SF3A2-206ENST00000592314 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.29
SF3A2-206ENST00000592314 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
SF3A2-206ENST00000592314 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.27
SF3A2-206ENST00000592314 LAMC3Q9Y6N6 1575 aa29.21■■■□□ 2.27
SF3A2-206ENST00000592314 KIF21AQ7Z4S6 1674 aa29.2■■■□□ 2.26
SF3A2-206ENST00000592314 PDS5BQ9NTI5 1447 aa28.95■■■□□ 2.23
SF3A2-206ENST00000592314 WIZO95785 1651 aa28.93■■■□□ 2.22
SF3A2-206ENST00000592314 CADPSQ9ULU8 1353 aa28.86■■■□□ 2.21
SF3A2-206ENST00000592314 MRC2Q9UBG0 1479 aa28.81■■■□□ 2.2
SF3A2-206ENST00000592314 WDR62O43379 1518 aa28.8■■■□□ 2.2
SF3A2-206ENST00000592314 CEP164Q9UPV0 1460 aa28.63■■■□□ 2.17
SF3A2-206ENST00000592314 FANCD2Q9BXW9 1451 aa28.59■■■□□ 2.17
SF3A2-206ENST00000592314 CFTRP13569 1480 aa28.53■■■□□ 2.16
SF3A2-206ENST00000592314 TRIM41Q8WV44 630 aa28.51■■■□□ 2.15
SF3A2-206ENST00000592314 RSF1Q96T23 1441 aaPredicted RBP28.5■■■□□ 2.15
SF3A2-206ENST00000592314 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
SF3A2-206ENST00000592314 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
SF3A2-206ENST00000592314 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
SF3A2-206ENST00000592314 OSCARQ8IYS5 282 aa28.19■■■□□ 2.1
SF3A2-206ENST00000592314 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
SF3A2-206ENST00000592314 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
SF3A2-206ENST00000592314 RIMBP3CA6NJZ7 1639 aa28.07■■■□□ 2.08
SF3A2-206ENST00000592314 RIMBP3BA6NNM3 1639 aa28.07■■■□□ 2.08
SF3A2-206ENST00000592314 RIMBP3Q9UFD9 1639 aa28.07■■■□□ 2.08
SF3A2-206ENST00000592314 TOPBP1Q92547 1522 aa28.04■■■□□ 2.08
SF3A2-206ENST00000592314 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
SF3A2-206ENST00000592314 EIF4G3O43432 1585 aaKnown RBP27.99■■■□□ 2.07
SF3A2-206ENST00000592314 DNMBPQ6XZF7 1577 aa27.92■■■□□ 2.06
SF3A2-206ENST00000592314 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
SF3A2-206ENST00000592314 TARBP1Q13395 1621 aaKnown RBP27.88■■■□□ 2.05
SF3A2-206ENST00000592314 CHD1O14646 1710 aa27.86■■■□□ 2.05
SF3A2-206ENST00000592314 ABCC8Q09428 1581 aa27.83■■■□□ 2.05
SF3A2-206ENST00000592314 AQRO60306 1485 aaKnown RBP eCLIP27.78■■■□□ 2.049e-9■■■■■ 28.9
SF3A2-206ENST00000592314 POLA1P09884 1462 aaPredicted RBP27.75■■■□□ 2.03
SF3A2-206ENST00000592314 ARAP1Q96P48 1450 aa27.65■■■□□ 2.02
SF3A2-206ENST00000592314 RAD54L2Q9Y4B4 1467 aa27.65■■■□□ 2.02
SF3A2-206ENST00000592314 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
SF3A2-206ENST00000592314 TDRD9Q8NDG6 1382 aaKnown RBP27.54■■■□□ 2
SF3A2-206ENST00000592314 FGD5Q6ZNL6 1462 aa27.53■■■□□ 2
SF3A2-206ENST00000592314 SOGA1O94964 1423 aa27.52■■■□□ 2
SF3A2-206ENST00000592314 FBLN2P98095 1184 aa27.52■■■□□ 2
SF3A2-206ENST00000592314 SNAPC4Q5SXM2 1469 aa27.51■■■□□ 2
SF3A2-206ENST00000592314 CUX1P39880 1505 aa27.51■■□□□ 1.99
SF3A2-206ENST00000592314 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
SF3A2-206ENST00000592314 WDR97A6NE52 1622 aa27.48■■□□□ 1.99
SF3A2-206ENST00000592314 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
SF3A2-206ENST00000592314 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
SF3A2-206ENST00000592314 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
SF3A2-206ENST00000592314 GRIN2BQ13224 1484 aa27.34■■□□□ 1.97
SF3A2-206ENST00000592314 TRHP20396 242 aaPredicted RBP27.32■■□□□ 1.96
SF3A2-206ENST00000592314 SYNJ2O15056 1496 aa27.3■■□□□ 1.96
SF3A2-206ENST00000592314 CHMP7Q8WUX9 453 aaPredicted RBP27.26■■□□□ 1.95
SF3A2-206ENST00000592314 ABCA5Q8WWZ7 1642 aa27.25■■□□□ 1.95
SF3A2-206ENST00000592314 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
SF3A2-206ENST00000592314 ABCA10Q8WWZ4 1543 aa27.18■■□□□ 1.94
SF3A2-206ENST00000592314 ERCC6L2Q5T890 1561 aa27.09■■□□□ 1.93
SF3A2-206ENST00000592314 ADAMTS12P58397 1594 aa27.05■■□□□ 1.92
SF3A2-206ENST00000592314 GRIN2AQ12879 1464 aa27.04■■□□□ 1.92
SF3A2-206ENST00000592314 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
SF3A2-206ENST00000592314 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
SF3A2-206ENST00000592314 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
SF3A2-206ENST00000592314 NUP160Q12769 1436 aa26.96■■□□□ 1.91
SF3A2-206ENST00000592314 SHROOM2Q13796 1616 aa26.94■■□□□ 1.9
SF3A2-206ENST00000592314 WRNQ14191 1432 aaPredicted RBP eCLIP26.94■■□□□ 1.99e-7■■■□□ 18.8
SF3A2-206ENST00000592314 SUPT5HO00267 1087 aaKnown RBP26.92■■□□□ 1.9
SF3A2-206ENST00000592314 FHAD1B1AJZ9 1412 aa26.83■■□□□ 1.89
SF3A2-206ENST00000592314 ERICH3Q5RHP9 1530 aa26.83■■□□□ 1.89
SF3A2-206ENST00000592314 KIF13AQ9H1H9 1805 aa26.76■■□□□ 1.88
SF3A2-206ENST00000592314 RUSC2Q8N2Y8 1516 aa26.7■■□□□ 1.86
SF3A2-206ENST00000592314 PRG4Q92954 1404 aaPredicted RBP26.67■■□□□ 1.86
SF3A2-206ENST00000592314 AEBP2Q6ZN18 517 aaPredicted RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms