RNA–Protein interactions for RNA: ENST00000591597.5

APOC2-204, Transcript of apolipoprotein C2, humanhuman

TSL 5 BASIC

Gene APOC2, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC2-204ENST00000591597 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
APOC2-204ENST00000591597 ABCC9O60706 1549 aa18.92■□□□□ 0.62
APOC2-204ENST00000591597 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
APOC2-204ENST00000591597 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
APOC2-204ENST00000591597 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
APOC2-204ENST00000591597 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
APOC2-204ENST00000591597 NACADO15069 1562 aa17.75■□□□□ 0.43
APOC2-204ENST00000591597 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
APOC2-204ENST00000591597 PABPN1Q86U42 306 aaKnown RBP eCLIP17.54■□□□□ 0.45e-10■□□□□ 8.4
APOC2-204ENST00000591597 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.39
APOC2-204ENST00000591597 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
APOC2-204ENST00000591597 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
APOC2-204ENST00000591597 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
APOC2-204ENST00000591597 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
APOC2-204ENST00000591597 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
APOC2-204ENST00000591597 SHROOM4Q9ULL8 1493 aa17.07■□□□□ 0.32
APOC2-204ENST00000591597 EIF4G1Q04637 1599 aaKnown RBP17.04■□□□□ 0.32
APOC2-204ENST00000591597 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
APOC2-204ENST00000591597 SMARCA4P51532 1647 aa16.42■□□□□ 0.22
APOC2-204ENST00000591597 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
APOC2-204ENST00000591597 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
APOC2-204ENST00000591597 HMGXB3Q12766 1538 aa16.31■□□□□ 0.2
APOC2-204ENST00000591597 NESP48681 1621 aa16.29■□□□□ 0.2
APOC2-204ENST00000591597 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
APOC2-204ENST00000591597 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
APOC2-204ENST00000591597 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
APOC2-204ENST00000591597 CUX2O14529 1486 aa16.22■□□□□ 0.19
APOC2-204ENST00000591597 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.19
APOC2-204ENST00000591597 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
APOC2-204ENST00000591597 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
APOC2-204ENST00000591597 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
APOC2-204ENST00000591597 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
APOC2-204ENST00000591597 THOC2Q8NI27 1593 aaKnown RBP16.16■□□□□ 0.18
APOC2-204ENST00000591597 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.18
APOC2-204ENST00000591597 WIZO95785 1651 aa16.07■□□□□ 0.16
APOC2-204ENST00000591597 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
APOC2-204ENST00000591597 PDS5BQ9NTI5 1447 aa15.86■□□□□ 0.13
APOC2-204ENST00000591597 WDR62O43379 1518 aa15.84■□□□□ 0.13
APOC2-204ENST00000591597 CADPSQ9ULU8 1353 aa15.84■□□□□ 0.13
APOC2-204ENST00000591597 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
APOC2-204ENST00000591597 TOP2AP11388 1531 aaKnown RBP15.77■□□□□ 0.11
APOC2-204ENST00000591597 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.11
APOC2-204ENST00000591597 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
APOC2-204ENST00000591597 FANCD2Q9BXW9 1451 aa15.74■□□□□ 0.11
APOC2-204ENST00000591597 PRDM2Q13029 1718 aa15.72■□□□□ 0.11
APOC2-204ENST00000591597 CFTRP13569 1480 aa15.7■□□□□ 0.1
APOC2-204ENST00000591597 URB2Q14146 1524 aaKnown RBP15.68■□□□□ 0.1
APOC2-204ENST00000591597 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
APOC2-204ENST00000591597 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
APOC2-204ENST00000591597 ZNF608Q9ULD9 1512 aaPredicted RBP15.5■□□□□ 0.07
APOC2-204ENST00000591597 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
APOC2-204ENST00000591597 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
APOC2-204ENST00000591597 RIMBP3CA6NJZ7 1639 aa15.43■□□□□ 0.06
APOC2-204ENST00000591597 RIMBP3BA6NNM3 1639 aa15.43■□□□□ 0.06
APOC2-204ENST00000591597 RIMBP3Q9UFD9 1639 aa15.43■□□□□ 0.06
APOC2-204ENST00000591597 DNMBPQ6XZF7 1577 aa15.41■□□□□ 0.06
APOC2-204ENST00000591597 CHD1O14646 1710 aa15.41■□□□□ 0.06
APOC2-204ENST00000591597 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
APOC2-204ENST00000591597 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
APOC2-204ENST00000591597 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
APOC2-204ENST00000591597 ARHGEF11O15085 1522 aa15.31■□□□□ 0.04
APOC2-204ENST00000591597 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
APOC2-204ENST00000591597 AQRO60306 1485 aaKnown RBP eCLIP15.29■□□□□ 0.048e-8■■■■□ 21.3
APOC2-204ENST00000591597 ABCC8Q09428 1581 aa15.28■□□□□ 0.04
APOC2-204ENST00000591597 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.04
APOC2-204ENST00000591597 WDR97A6NE52 1622 aa15.23■□□□□ 0.03
APOC2-204ENST00000591597 CUX1P39880 1505 aa15.22■□□□□ 0.03
APOC2-204ENST00000591597 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
APOC2-204ENST00000591597 ARAP1Q96P48 1450 aa15.18■□□□□ 0.02
APOC2-204ENST00000591597 PBRM1Q86U86 1689 aa15.17■□□□□ 0.02
APOC2-204ENST00000591597 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
APOC2-204ENST00000591597 TDRD9Q8NDG6 1382 aaKnown RBP15.17■□□□□ 0.02
APOC2-204ENST00000591597 SOGA1O94964 1423 aa15.15■□□□□ 0.02
APOC2-204ENST00000591597 CLASP1Q7Z460 1538 aa15.13■□□□□ 0.01
APOC2-204ENST00000591597 FBLN2P98095 1184 aa15.12■□□□□ 0.01
APOC2-204ENST00000591597 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
APOC2-204ENST00000591597 ABCA5Q8WWZ7 1642 aa15.07■□□□□ 0
APOC2-204ENST00000591597 MAGI1Q96QZ7 1491 aaPredicted RBP15.05■□□□□ -0
APOC2-204ENST00000591597 SYNJ1O43426 1573 aa15.05■□□□□ -0
APOC2-204ENST00000591597 GRIN2BQ13224 1484 aa15.03■□□□□ -0
APOC2-204ENST00000591597 SYNJ2O15056 1496 aa15.01□□□□□ -0.01
APOC2-204ENST00000591597 CHIC1Q5VXU3 224 aa15.01□□□□□ -0.01
APOC2-204ENST00000591597 GAPVD1Q14C86 1478 aa15□□□□□ -0.01
APOC2-204ENST00000591597 SUPT5HO00267 1087 aaKnown RBP14.99□□□□□ -0.01
APOC2-204ENST00000591597 BIVM-ERCC5R4GMW8 1640 aa14.99□□□□□ -0.01
APOC2-204ENST00000591597 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
APOC2-204ENST00000591597 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
APOC2-204ENST00000591597 ADAMTS12P58397 1594 aa14.97□□□□□ -0.01
APOC2-204ENST00000591597 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
APOC2-204ENST00000591597 TOP2BQ02880 1626 aa14.94□□□□□ -0.02
APOC2-204ENST00000591597 CEP170Q5SW79 1584 aa14.94□□□□□ -0.02
APOC2-204ENST00000591597 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
APOC2-204ENST00000591597 GRIN2AQ12879 1464 aa14.9□□□□□ -0.02
APOC2-204ENST00000591597 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
APOC2-204ENST00000591597 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
APOC2-204ENST00000591597 NUP160Q12769 1436 aa14.83□□□□□ -0.04
APOC2-204ENST00000591597 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
APOC2-204ENST00000591597 RUSC2Q8N2Y8 1516 aa14.77□□□□□ -0.04
APOC2-204ENST00000591597 FHAD1B1AJZ9 1412 aa14.76□□□□□ -0.05
APOC2-204ENST00000591597 KIF13AQ9H1H9 1805 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms