RNA–Protein interactions for RNA: ENST00000450185.5

SFXN5-206, Transcript of sideroflexin 5, humanhuman

TSL 2

Gene SFXN5, Length 2,975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-206ENST00000450185 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
SFXN5-206ENST00000450185 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
SFXN5-206ENST00000450185 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
SFXN5-206ENST00000450185 CCDC180Q9P1Z9 1646 aa22.1■■□□□ 1.13
SFXN5-206ENST00000450185 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.11
SFXN5-206ENST00000450185 ZCCHC6Q5VYS8 1495 aaKnown RBP21.54■■□□□ 1.04
SFXN5-206ENST00000450185 SHROOM4Q9ULL8 1493 aa21.18■□□□□ 0.98
SFXN5-206ENST00000450185 DCAF8L2P0C7V8 631 aa21.15■□□□□ 0.98
SFXN5-206ENST00000450185 DCAF1Q9Y4B6 1507 aa21.1■□□□□ 0.97
SFXN5-206ENST00000450185 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
SFXN5-206ENST00000450185 ABCC9O60706 1549 aa20.74■□□□□ 0.91
SFXN5-206ENST00000450185 MYO15BQ96JP2 1530 aa20.72■□□□□ 0.91
SFXN5-206ENST00000450185 NACADO15069 1562 aa20.54■□□□□ 0.88
SFXN5-206ENST00000450185 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
SFXN5-206ENST00000450185 SCRIBQ14160 1630 aa20.45■□□□□ 0.87
SFXN5-206ENST00000450185 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
SFXN5-206ENST00000450185 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
SFXN5-206ENST00000450185 RSF1Q96T23 1441 aaPredicted RBP19.98■□□□□ 0.79
SFXN5-206ENST00000450185 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
SFXN5-206ENST00000450185 CECR2Q9BXF3 1484 aa19.89■□□□□ 0.77
SFXN5-206ENST00000450185 MROH2BQ7Z745 1585 aa19.79■□□□□ 0.76
SFXN5-206ENST00000450185 HRCP23327 699 aa19.75■□□□□ 0.75
SFXN5-206ENST00000450185 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
SFXN5-206ENST00000450185 PCGF6Q9BYE7 350 aa19.71■□□□□ 0.75
SFXN5-206ENST00000450185 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
SFXN5-206ENST00000450185 PABPN1Q86U42 306 aaKnown RBP eCLIP19.66■□□□□ 0.74
SFXN5-206ENST00000450185 WIZO95785 1651 aa19.65■□□□□ 0.74
SFXN5-206ENST00000450185 LOC105371045A0A1W2PR82 267 aa19.62■□□□□ 0.73
SFXN5-206ENST00000450185 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
SFXN5-206ENST00000450185 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
SFXN5-206ENST00000450185 ADRA2BP18089 450 aa19.51■□□□□ 0.71
SFXN5-206ENST00000450185 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
SFXN5-206ENST00000450185 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
SFXN5-206ENST00000450185 PEG3Q9GZU2 1588 aa19.31■□□□□ 0.68
SFXN5-206ENST00000450185 FOXD1Q16676 465 aa19.26■□□□□ 0.67
SFXN5-206ENST00000450185 CCDC88BA6NC98 1476 aa19.26■□□□□ 0.67
SFXN5-206ENST00000450185 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
SFXN5-206ENST00000450185 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
SFXN5-206ENST00000450185 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
SFXN5-206ENST00000450185 EHMT2Q96KQ7 1210 aa19.24■□□□□ 0.67
SFXN5-206ENST00000450185 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
SFXN5-206ENST00000450185 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
SFXN5-206ENST00000450185 TRIM26Q12899 539 aaPredicted RBP19.14■□□□□ 0.65
SFXN5-206ENST00000450185 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
SFXN5-206ENST00000450185 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
SFXN5-206ENST00000450185 ABCC8Q09428 1581 aa18.97■□□□□ 0.63
SFXN5-206ENST00000450185 HMGXB3Q12766 1538 aa18.96■□□□□ 0.63
SFXN5-206ENST00000450185 KCNA4P22459 653 aa18.81■□□□□ 0.6
SFXN5-206ENST00000450185 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
SFXN5-206ENST00000450185 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
SFXN5-206ENST00000450185 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
SFXN5-206ENST00000450185 SYNJ1O43426 1573 aa18.7■□□□□ 0.58
SFXN5-206ENST00000450185 SOGA1O94964 1423 aa18.69■□□□□ 0.58
SFXN5-206ENST00000450185 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
SFXN5-206ENST00000450185 EEA1Q15075 1411 aa18.66■□□□□ 0.58
SFXN5-206ENST00000450185 CFTRP13569 1480 aa18.65■□□□□ 0.58
SFXN5-206ENST00000450185 TTBK1Q5TCY1 1321 aaPredicted RBP18.61■□□□□ 0.57
SFXN5-206ENST00000450185 RUSC2Q8N2Y8 1516 aa18.6■□□□□ 0.57
SFXN5-206ENST00000450185 TOP2BQ02880 1626 aa18.58■□□□□ 0.57
SFXN5-206ENST00000450185 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
SFXN5-206ENST00000450185 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
SFXN5-206ENST00000450185 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
SFXN5-206ENST00000450185 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
SFXN5-206ENST00000450185 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
SFXN5-206ENST00000450185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
SFXN5-206ENST00000450185 CUX1P39880 1505 aa18.48■□□□□ 0.55
SFXN5-206ENST00000450185 CCER1Q8TC90 406 aaPredicted RBP18.46■□□□□ 0.55
SFXN5-206ENST00000450185 TNIKQ9UKE5 1360 aa18.44■□□□□ 0.54
SFXN5-206ENST00000450185 GOLGA3Q08378 1498 aa18.44■□□□□ 0.54
SFXN5-206ENST00000450185 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
SFXN5-206ENST00000450185 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
SFXN5-206ENST00000450185 KIF21BO75037 1637 aa18.39■□□□□ 0.54
SFXN5-206ENST00000450185 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
SFXN5-206ENST00000450185 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
SFXN5-206ENST00000450185 FANCD2Q9BXW9 1451 aa18.34■□□□□ 0.53
SFXN5-206ENST00000450185 NESP48681 1621 aa18.3■□□□□ 0.52
SFXN5-206ENST00000450185 KIF27Q86VH2 1401 aa18.29■□□□□ 0.52
SFXN5-206ENST00000450185 RAPGEF2Q9Y4G8 1499 aa18.29■□□□□ 0.52
SFXN5-206ENST00000450185 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
SFXN5-206ENST00000450185 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
SFXN5-206ENST00000450185 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
SFXN5-206ENST00000450185 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
SFXN5-206ENST00000450185 PRXQ9BXM0 1461 aa18.23■□□□□ 0.51
SFXN5-206ENST00000450185 ERICH3Q5RHP9 1530 aa18.22■□□□□ 0.51
SFXN5-206ENST00000450185 DNMBPQ6XZF7 1577 aa18.2■□□□□ 0.5
SFXN5-206ENST00000450185 CUX2O14529 1486 aa18.19■□□□□ 0.5
SFXN5-206ENST00000450185 ACIN1Q9UKV3 1341 aaKnown RBP18.19■□□□□ 0.5
SFXN5-206ENST00000450185 CLIP1P30622 1438 aa18.17■□□□□ 0.5
SFXN5-206ENST00000450185 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
SFXN5-206ENST00000450185 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
SFXN5-206ENST00000450185 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
SFXN5-206ENST00000450185 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
SFXN5-206ENST00000450185 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
SFXN5-206ENST00000450185 IGF1RP08069 1367 aa18.11■□□□□ 0.49
SFXN5-206ENST00000450185 PPP4R3CPQ6ZMV5 832 aa18.1■□□□□ 0.49
SFXN5-206ENST00000450185 DIEXFQ68CQ4 756 aaKnown RBP18.09■□□□□ 0.49
SFXN5-206ENST00000450185 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
SFXN5-206ENST00000450185 RAD54L2Q9Y4B4 1467 aa18.07■□□□□ 0.48
SFXN5-206ENST00000450185 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
SFXN5-206ENST00000450185 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms