RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 NISCHQ9Y2I1 1504 aa37.13■■■■□ 3.53
SF3A2-207ENST00000592839 CCDC180Q9P1Z9 1646 aa33.28■■■□□ 2.92
SF3A2-207ENST00000592839 ABCC9O60706 1549 aa32.57■■■□□ 2.8
SF3A2-207ENST00000592839 RB1CC1Q8TDY2 1594 aa31.38■■■□□ 2.61
SF3A2-207ENST00000592839 NACADO15069 1562 aa31.32■■■□□ 2.6
SF3A2-207ENST00000592839 MYO15BQ96JP2 1530 aa31.19■■■□□ 2.58
SF3A2-207ENST00000592839 ZCCHC6Q5VYS8 1495 aaKnown RBP30.91■■■□□ 2.54
SF3A2-207ENST00000592839 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
SF3A2-207ENST00000592839 UNC13AQ9UPW8 1703 aa30.68■■■□□ 2.5
SF3A2-207ENST00000592839 DCAF8L2P0C7V8 631 aa30.66■■■□□ 2.5
SF3A2-207ENST00000592839 BICRAQ9NZM4 1560 aa30.48■■■□□ 2.47
SF3A2-207ENST00000592839 DNAJC5BQ9UF47 199 aa30.4■■■□□ 2.46
SF3A2-207ENST00000592839 SHROOM4Q9ULL8 1493 aa30.31■■■□□ 2.44
SF3A2-207ENST00000592839 PABPN1Q86U42 306 aaKnown RBP eCLIP30.26■■■□□ 2.43
SF3A2-207ENST00000592839 SCRIBQ14160 1630 aa30.07■■■□□ 2.4
SF3A2-207ENST00000592839 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
SF3A2-207ENST00000592839 CC2D2AQ9P2K1 1620 aa29.58■■■□□ 2.33
SF3A2-207ENST00000592839 CECR2Q9BXF3 1484 aa29.39■■■□□ 2.3
SF3A2-207ENST00000592839 NCAPD3P42695 1498 aa28.9■■■□□ 2.22
SF3A2-207ENST00000592839 SMARCA4P51532 1647 aa28.88■■■□□ 2.21
SF3A2-207ENST00000592839 BAZ1AQ9NRL2 1556 aaPredicted RBP28.82■■■□□ 2.2
SF3A2-207ENST00000592839 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
SF3A2-207ENST00000592839 SMARCA2P51531 1590 aa28.78■■■□□ 2.2
SF3A2-207ENST00000592839 PEG3Q9GZU2 1588 aa28.77■■■□□ 2.2
SF3A2-207ENST00000592839 HMGXB3Q12766 1538 aa28.76■■■□□ 2.19
SF3A2-207ENST00000592839 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
SF3A2-207ENST00000592839 BAZ1BQ9UIG0 1483 aaKnown RBP28.47■■■□□ 2.15
SF3A2-207ENST00000592839 WIZO95785 1651 aa28.19■■■□□ 2.1
SF3A2-207ENST00000592839 LAMC3Q9Y6N6 1575 aa28.18■■■□□ 2.1
SF3A2-207ENST00000592839 CUX2O14529 1486 aa28.14■■■□□ 2.09
SF3A2-207ENST00000592839 NESP48681 1621 aa28.12■■■□□ 2.09
SF3A2-207ENST00000592839 RSF1Q96T23 1441 aaPredicted RBP28.11■■■□□ 2.09
SF3A2-207ENST00000592839 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
SF3A2-207ENST00000592839 DNAJC5Q9H3Z4 198 aa28.05■■■□□ 2.08
SF3A2-207ENST00000592839 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
SF3A2-207ENST00000592839 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.06
SF3A2-207ENST00000592839 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
SF3A2-207ENST00000592839 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
SF3A2-207ENST00000592839 KIF21AQ7Z4S6 1674 aa27.86■■■□□ 2.05
SF3A2-207ENST00000592839 CFTRP13569 1480 aa27.78■■■□□ 2.04
SF3A2-207ENST00000592839 WDR62O43379 1518 aa27.67■■■□□ 2.02
SF3A2-207ENST00000592839 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
SF3A2-207ENST00000592839 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
SF3A2-207ENST00000592839 CEP164Q9UPV0 1460 aa27.6■■■□□ 2.01
SF3A2-207ENST00000592839 PRDM2Q13029 1718 aa27.6■■■□□ 2.01
SF3A2-207ENST00000592839 CCDC88BA6NC98 1476 aa27.56■■■□□ 2
SF3A2-207ENST00000592839 URB2Q14146 1524 aaKnown RBP27.37■■□□□ 1.97
SF3A2-207ENST00000592839 ABCC8Q09428 1581 aa27.19■■□□□ 1.94
SF3A2-207ENST00000592839 TOPBP1Q92547 1522 aa27.15■■□□□ 1.94
SF3A2-207ENST00000592839 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
SF3A2-207ENST00000592839 IFT140Q96RY7 1462 aa27.08■■□□□ 1.93
SF3A2-207ENST00000592839 TARBP1Q13395 1621 aaKnown RBP26.94■■□□□ 1.9
SF3A2-207ENST00000592839 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
SF3A2-207ENST00000592839 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
SF3A2-207ENST00000592839 EIF4G3O43432 1585 aaKnown RBP26.86■■□□□ 1.89
SF3A2-207ENST00000592839 WDR97A6NE52 1622 aa26.84■■□□□ 1.89
SF3A2-207ENST00000592839 CUX1P39880 1505 aa26.81■■□□□ 1.88
SF3A2-207ENST00000592839 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
SF3A2-207ENST00000592839 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
SF3A2-207ENST00000592839 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
SF3A2-207ENST00000592839 OSCARQ8IYS5 282 aa26.71■■□□□ 1.87
SF3A2-207ENST00000592839 SOGA1O94964 1423 aa26.69■■□□□ 1.86
SF3A2-207ENST00000592839 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
SF3A2-207ENST00000592839 AQRO60306 1485 aaKnown RBP eCLIP26.67■■□□□ 1.862e-9■■■■■ 38.8
SF3A2-207ENST00000592839 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
SF3A2-207ENST00000592839 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
SF3A2-207ENST00000592839 TOP2BQ02880 1626 aa26.55■■□□□ 1.84
SF3A2-207ENST00000592839 CHD1O14646 1710 aa26.55■■□□□ 1.84
SF3A2-207ENST00000592839 TDRD9Q8NDG6 1382 aaKnown RBP26.53■■□□□ 1.84
SF3A2-207ENST00000592839 MAGI1Q96QZ7 1491 aaPredicted RBP26.53■■□□□ 1.84
SF3A2-207ENST00000592839 ABCA5Q8WWZ7 1642 aa26.51■■□□□ 1.83
SF3A2-207ENST00000592839 GRIN2BQ13224 1484 aa26.5■■□□□ 1.83
SF3A2-207ENST00000592839 WRNQ14191 1432 aaPredicted RBP eCLIP26.48■■□□□ 1.83
SF3A2-207ENST00000592839 SNAPC4Q5SXM2 1469 aa26.46■■□□□ 1.83
SF3A2-207ENST00000592839 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
SF3A2-207ENST00000592839 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
SF3A2-207ENST00000592839 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
SF3A2-207ENST00000592839 RIMBP3CA6NJZ7 1639 aa26.42■■□□□ 1.82
SF3A2-207ENST00000592839 RIMBP3BA6NNM3 1639 aa26.42■■□□□ 1.82
SF3A2-207ENST00000592839 RIMBP3Q9UFD9 1639 aa26.42■■□□□ 1.82
SF3A2-207ENST00000592839 ARHGEF11O15085 1522 aa26.39■■□□□ 1.82
SF3A2-207ENST00000592839 SYNJ2O15056 1496 aa26.39■■□□□ 1.82
SF3A2-207ENST00000592839 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
SF3A2-207ENST00000592839 ERICH3Q5RHP9 1530 aa26.25■■□□□ 1.79
SF3A2-207ENST00000592839 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
SF3A2-207ENST00000592839 CHMP7Q8WUX9 453 aaPredicted RBP26.21■■□□□ 1.79
SF3A2-207ENST00000592839 FBLN2P98095 1184 aa26.19■■□□□ 1.78
SF3A2-207ENST00000592839 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
SF3A2-207ENST00000592839 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
SF3A2-207ENST00000592839 FHAD1B1AJZ9 1412 aa26.14■■□□□ 1.78
SF3A2-207ENST00000592839 NUP160Q12769 1436 aa26.14■■□□□ 1.77
SF3A2-207ENST00000592839 CYB5RLQ6IPT4 315 aa26.07■■□□□ 1.76
SF3A2-207ENST00000592839 CEP170Q5SW79 1584 aa26.05■■□□□ 1.76
SF3A2-207ENST00000592839 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
SF3A2-207ENST00000592839 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
SF3A2-207ENST00000592839 CUL7Q14999 1698 aa25.94■■□□□ 1.74
SF3A2-207ENST00000592839 IGF1RP08069 1367 aa25.89■■□□□ 1.74
SF3A2-207ENST00000592839 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
SF3A2-207ENST00000592839 ERCC6L2Q5T890 1561 aa25.83■■□□□ 1.73
SF3A2-207ENST00000592839 TRHP20396 242 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms