RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.1
SREBF1-217ENST00000577897 ABCC9O60706 1549 aa32■■■□□ 2.71
SREBF1-217ENST00000577897 CCDC180Q9P1Z9 1646 aa31.21■■■□□ 2.59
SREBF1-217ENST00000577897 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
SREBF1-217ENST00000577897 RB1CC1Q8TDY2 1594 aa30.09■■■□□ 2.41
SREBF1-217ENST00000577897 PABPN1Q86U42 306 aaKnown RBP eCLIP29.68■■■□□ 2.34
SREBF1-217ENST00000577897 NACADO15069 1562 aa29.67■■■□□ 2.34
SREBF1-217ENST00000577897 DCAF8L2P0C7V8 631 aa29.51■■■□□ 2.31
SREBF1-217ENST00000577897 UNC13AQ9UPW8 1703 aa29.41■■■□□ 2.3
SREBF1-217ENST00000577897 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
SREBF1-217ENST00000577897 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
SREBF1-217ENST00000577897 MYO15BQ96JP2 1530 aa28.95■■■□□ 2.23
SREBF1-217ENST00000577897 CECR2Q9BXF3 1484 aa28.87■■■□□ 2.21
SREBF1-217ENST00000577897 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
SREBF1-217ENST00000577897 SHROOM4Q9ULL8 1493 aa28.69■■■□□ 2.18
SREBF1-217ENST00000577897 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
SREBF1-217ENST00000577897 SCRIBQ14160 1630 aa28.5■■■□□ 2.15
SREBF1-217ENST00000577897 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
SREBF1-217ENST00000577897 DCAF1Q9Y4B6 1507 aa28.34■■■□□ 2.13
SREBF1-217ENST00000577897 CUX2O14529 1486 aa27.94■■■□□ 2.06
SREBF1-217ENST00000577897 ERCC6Q03468 1493 aa27.7■■■□□ 2.02
SREBF1-217ENST00000577897 NCAPD3P42695 1498 aa27.38■■□□□ 1.97
SREBF1-217ENST00000577897 TRIM41Q8WV44 630 aa27.35■■□□□ 1.97
SREBF1-217ENST00000577897 NESP48681 1621 aa27.27■■□□□ 1.96
SREBF1-217ENST00000577897 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
SREBF1-217ENST00000577897 HMGXB3Q12766 1538 aa27.14■■□□□ 1.94
SREBF1-217ENST00000577897 SMARCA2P51531 1590 aa27.12■■□□□ 1.93
SREBF1-217ENST00000577897 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
SREBF1-217ENST00000577897 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
SREBF1-217ENST00000577897 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
SREBF1-217ENST00000577897 LAMC3Q9Y6N6 1575 aa26.92■■□□□ 1.9
SREBF1-217ENST00000577897 KIF21AQ7Z4S6 1674 aa26.9■■□□□ 1.9
SREBF1-217ENST00000577897 BAZ1AQ9NRL2 1556 aaPredicted RBP26.8■■□□□ 1.88
SREBF1-217ENST00000577897 PDS5BQ9NTI5 1447 aa26.79■■□□□ 1.88
SREBF1-217ENST00000577897 PEG3Q9GZU2 1588 aa26.72■■□□□ 1.87
SREBF1-217ENST00000577897 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
SREBF1-217ENST00000577897 WDR62O43379 1518 aa26.56■■□□□ 1.84
SREBF1-217ENST00000577897 MROH2BQ7Z745 1585 aa26.56■■□□□ 1.84
SREBF1-217ENST00000577897 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
SREBF1-217ENST00000577897 OSCARQ8IYS5 282 aa26.5■■□□□ 1.83
SREBF1-217ENST00000577897 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
SREBF1-217ENST00000577897 FANCD2Q9BXW9 1451 aa26.29■■□□□ 1.8
SREBF1-217ENST00000577897 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
SREBF1-217ENST00000577897 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
SREBF1-217ENST00000577897 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
SREBF1-217ENST00000577897 WIZO95785 1651 aa26.24■■□□□ 1.79
SREBF1-217ENST00000577897 URB2Q14146 1524 aaKnown RBP26.11■■□□□ 1.77
SREBF1-217ENST00000577897 CFTRP13569 1480 aa26.08■■□□□ 1.77
SREBF1-217ENST00000577897 ARHGEF11O15085 1522 aa26.06■■□□□ 1.76
SREBF1-217ENST00000577897 TRHP20396 242 aaPredicted RBP25.98■■□□□ 1.75
SREBF1-217ENST00000577897 AEBP2Q6ZN18 517 aaPredicted RBP25.98■■□□□ 1.75
SREBF1-217ENST00000577897 CYB5RLQ6IPT4 315 aa25.94■■□□□ 1.74
SREBF1-217ENST00000577897 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
SREBF1-217ENST00000577897 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
SREBF1-217ENST00000577897 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.72
SREBF1-217ENST00000577897 PRDM2Q13029 1718 aa25.79■■□□□ 1.72
SREBF1-217ENST00000577897 EIF4G3O43432 1585 aaKnown RBP25.76■■□□□ 1.71
SREBF1-217ENST00000577897 ARAP1Q96P48 1450 aa25.73■■□□□ 1.71
SREBF1-217ENST00000577897 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
SREBF1-217ENST00000577897 CHD1O14646 1710 aa25.71■■□□□ 1.71
SREBF1-217ENST00000577897 TOPBP1Q92547 1522 aa25.7■■□□□ 1.7
SREBF1-217ENST00000577897 FBLN2P98095 1184 aa25.63■■□□□ 1.69
SREBF1-217ENST00000577897 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.698e-19■■□□□ 11.4
SREBF1-217ENST00000577897 ABCC8Q09428 1581 aa25.54■■□□□ 1.68
SREBF1-217ENST00000577897 DNMBPQ6XZF7 1577 aa25.54■■□□□ 1.68
SREBF1-217ENST00000577897 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
SREBF1-217ENST00000577897 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
SREBF1-217ENST00000577897 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
SREBF1-217ENST00000577897 CLASP1Q7Z460 1538 aa25.35■■□□□ 1.65
SREBF1-217ENST00000577897 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
SREBF1-217ENST00000577897 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
SREBF1-217ENST00000577897 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
SREBF1-217ENST00000577897 SYNJ1O43426 1573 aa25.29■■□□□ 1.64
SREBF1-217ENST00000577897 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
SREBF1-217ENST00000577897 SOGA1O94964 1423 aa25.26■■□□□ 1.63
SREBF1-217ENST00000577897 MAGI1Q96QZ7 1491 aaPredicted RBP25.18■■□□□ 1.62
SREBF1-217ENST00000577897 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
SREBF1-217ENST00000577897 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
SREBF1-217ENST00000577897 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
SREBF1-217ENST00000577897 SYNJ2O15056 1496 aa25.12■■□□□ 1.61
SREBF1-217ENST00000577897 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
SREBF1-217ENST00000577897 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
SREBF1-217ENST00000577897 CUX1P39880 1505 aa25■■□□□ 1.59
SREBF1-217ENST00000577897 ILDR1Q86SU0 546 aaPredicted RBP24.97■■□□□ 1.59
SREBF1-217ENST00000577897 ERCC6L2Q5T890 1561 aa24.95■■□□□ 1.58
SREBF1-217ENST00000577897 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
SREBF1-217ENST00000577897 CEP170Q5SW79 1584 aa24.82■■□□□ 1.56
SREBF1-217ENST00000577897 KIF13AQ9H1H9 1805 aa24.82■■□□□ 1.56
SREBF1-217ENST00000577897 GRIN2AQ12879 1464 aa24.81■■□□□ 1.56
SREBF1-217ENST00000577897 ABCA10Q8WWZ4 1543 aa24.78■■□□□ 1.56
SREBF1-217ENST00000577897 NUP160Q12769 1436 aa24.72■■□□□ 1.55
SREBF1-217ENST00000577897 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
SREBF1-217ENST00000577897 SHROOM2Q13796 1616 aa24.69■■□□□ 1.54
SREBF1-217ENST00000577897 KDM4FA0A1W2PPD8 638 aa24.69■■□□□ 1.54
SREBF1-217ENST00000577897 FAM69CQ0P6D2 419 aa24.61■■□□□ 1.53
SREBF1-217ENST00000577897 FHAD1B1AJZ9 1412 aa24.59■■□□□ 1.53
SREBF1-217ENST00000577897 PRG4Q92954 1404 aaPredicted RBP24.59■■□□□ 1.53
SREBF1-217ENST00000577897 ABCC10Q5T3U5 1492 aa24.56■■□□□ 1.52
SREBF1-217ENST00000577897 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
SREBF1-217ENST00000577897 KDM6BO15054 1643 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms