RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 NISCHQ9Y2I1 1504 aa21.6■■□□□ 1.05
SFXN5-201ENST00000272433 DCAF8L2P0C7V8 631 aa20.58■□□□□ 0.88
SFXN5-201ENST00000272433 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
SFXN5-201ENST00000272433 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
SFXN5-201ENST00000272433 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
SFXN5-201ENST00000272433 ABCC9O60706 1549 aa18.48■□□□□ 0.55
SFXN5-201ENST00000272433 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
SFXN5-201ENST00000272433 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
SFXN5-201ENST00000272433 TRIM41Q8WV44 630 aa18■□□□□ 0.47
SFXN5-201ENST00000272433 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
SFXN5-201ENST00000272433 CCDC180Q9P1Z9 1646 aa17.92■□□□□ 0.46
SFXN5-201ENST00000272433 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
SFXN5-201ENST00000272433 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
SFXN5-201ENST00000272433 TTBK1Q5TCY1 1321 aaPredicted RBP17.8■□□□□ 0.44
SFXN5-201ENST00000272433 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
SFXN5-201ENST00000272433 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
SFXN5-201ENST00000272433 PCGF6Q9BYE7 350 aa17.64■□□□□ 0.41
SFXN5-201ENST00000272433 UBTFP17480 764 aaKnown RBP17.56■□□□□ 0.4
SFXN5-201ENST00000272433 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
SFXN5-201ENST00000272433 APLP2Q06481 763 aa17.46■□□□□ 0.39
SFXN5-201ENST00000272433 ATP1B4Q9UN42 357 aaPredicted RBP17.34■□□□□ 0.37
SFXN5-201ENST00000272433 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
SFXN5-201ENST00000272433 NACADO15069 1562 aa17.21■□□□□ 0.35
SFXN5-201ENST00000272433 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
SFXN5-201ENST00000272433 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
SFXN5-201ENST00000272433 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
SFXN5-201ENST00000272433 CCER1Q8TC90 406 aaPredicted RBP17.01■□□□□ 0.31
SFXN5-201ENST00000272433 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
SFXN5-201ENST00000272433 ITGAEP38570 1179 aa16.91■□□□□ 0.3
SFXN5-201ENST00000272433 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
SFXN5-201ENST00000272433 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
SFXN5-201ENST00000272433 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
SFXN5-201ENST00000272433 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
SFXN5-201ENST00000272433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
SFXN5-201ENST00000272433 P3H3Q8IVL6 736 aa16.76■□□□□ 0.27
SFXN5-201ENST00000272433 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
SFXN5-201ENST00000272433 FBLN2P98095 1184 aa16.75■□□□□ 0.27
SFXN5-201ENST00000272433 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
SFXN5-201ENST00000272433 HRCP23327 699 aa16.69■□□□□ 0.26
SFXN5-201ENST00000272433 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
SFXN5-201ENST00000272433 ARID3CA6NKF2 412 aa16.64■□□□□ 0.25
SFXN5-201ENST00000272433 WIZO95785 1651 aa16.63■□□□□ 0.25
SFXN5-201ENST00000272433 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
SFXN5-201ENST00000272433 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.241e-6■■■■■ 58.5
SFXN5-201ENST00000272433 FAM50AQ14320 339 aaKnown RBP16.54■□□□□ 0.24
SFXN5-201ENST00000272433 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
SFXN5-201ENST00000272433 SOGA1O94964 1423 aa16.45■□□□□ 0.22
SFXN5-201ENST00000272433 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
SFXN5-201ENST00000272433 MYT1LQ9UL68 1186 aa16.4■□□□□ 0.22
SFXN5-201ENST00000272433 SMARCA4P51532 1647 aa16.39■□□□□ 0.21
SFXN5-201ENST00000272433 TOP2AP11388 1531 aaKnown RBP16.34■□□□□ 0.21
SFXN5-201ENST00000272433 SMARCA2P51531 1590 aa16.34■□□□□ 0.21
SFXN5-201ENST00000272433 YTHDC1Q96MU7 727 aaKnown RBP16.31■□□□□ 0.2
SFXN5-201ENST00000272433 CLIP1P30622 1438 aa16.3■□□□□ 0.2
SFXN5-201ENST00000272433 CEP162Q5TB80 1403 aa16.29■□□□□ 0.2
SFXN5-201ENST00000272433 NEUROD1Q13562 356 aa16.26■□□□□ 0.19
SFXN5-201ENST00000272433 TRIM52Q96A61 297 aa16.24■□□□□ 0.19
SFXN5-201ENST00000272433 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
SFXN5-201ENST00000272433 CHMP7Q8WUX9 453 aaPredicted RBP16.24■□□□□ 0.19
SFXN5-201ENST00000272433 GOLGA3Q08378 1498 aa16.23■□□□□ 0.19
SFXN5-201ENST00000272433 EEA1Q15075 1411 aa16.22■□□□□ 0.19
SFXN5-201ENST00000272433 ZNF777Q9ULD5 760 aaPredicted RBP16.21■□□□□ 0.18
SFXN5-201ENST00000272433 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
SFXN5-201ENST00000272433 CUX2O14529 1486 aa16.19■□□□□ 0.18
SFXN5-201ENST00000272433 CNGB1Q14028 1251 aaPredicted RBP16.18■□□□□ 0.18
SFXN5-201ENST00000272433 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
SFXN5-201ENST00000272433 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
SFXN5-201ENST00000272433 POLR3GLQ9BT43 218 aa16.17■□□□□ 0.18
SFXN5-201ENST00000272433 TDRD9Q8NDG6 1382 aaKnown RBP16.14■□□□□ 0.18
SFXN5-201ENST00000272433 ERCC6Q03468 1493 aa16.14■□□□□ 0.17
SFXN5-201ENST00000272433 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
SFXN5-201ENST00000272433 EIF4G1Q04637 1599 aaKnown RBP16.12■□□□□ 0.17
SFXN5-201ENST00000272433 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
SFXN5-201ENST00000272433 BICRAQ9NZM4 1560 aa16.11■□□□□ 0.17
SFXN5-201ENST00000272433 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
SFXN5-201ENST00000272433 CHIC2Q9UKJ5 165 aa16.1■□□□□ 0.17
SFXN5-201ENST00000272433 DIEXFQ68CQ4 756 aaKnown RBP16.06■□□□□ 0.16
SFXN5-201ENST00000272433 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
SFXN5-201ENST00000272433 CDK11AQ9UQ88 783 aaPredicted RBP16.04■□□□□ 0.16
SFXN5-201ENST00000272433 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
SFXN5-201ENST00000272433 MTUS2Q5JR59 1369 aa16.02■□□□□ 0.15
SFXN5-201ENST00000272433 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
SFXN5-201ENST00000272433 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
SFXN5-201ENST00000272433 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
SFXN5-201ENST00000272433 FANCD2Q9BXW9 1451 aa15.96■□□□□ 0.15
SFXN5-201ENST00000272433 KANK4Q5T7N3 995 aaPredicted RBP15.96■□□□□ 0.15
SFXN5-201ENST00000272433 PELP1Q8IZL8 1130 aaKnown RBP15.96■□□□□ 0.15
SFXN5-201ENST00000272433 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
SFXN5-201ENST00000272433 NESP48681 1621 aa15.92■□□□□ 0.14
SFXN5-201ENST00000272433 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
SFXN5-201ENST00000272433 RRP7BPQ9NSQ0 103 aa15.91■□□□□ 0.14
SFXN5-201ENST00000272433 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
SFXN5-201ENST00000272433 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
SFXN5-201ENST00000272433 ZNF316A6NFI3 1004 aaPredicted RBP15.87■□□□□ 0.13
SFXN5-201ENST00000272433 VPS8Q8N3P4 1428 aa15.83■□□□□ 0.12
SFXN5-201ENST00000272433 FGD5Q6ZNL6 1462 aa15.82■□□□□ 0.12
SFXN5-201ENST00000272433 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
SFXN5-201ENST00000272433 PLEKHD1A6NEE1 506 aa15.81■□□□□ 0.12
SFXN5-201ENST00000272433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
SFXN5-201ENST00000272433 IGF1RP08069 1367 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms