RNA–Protein interactions for RNA: ENST00000528581.5

CHID1-215, Transcript of chitinase domain containing 1, humanhuman

TSL 2 BASIC

Gene CHID1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-215ENST00000528581 NISCHQ9Y2I1 1504 aa39.11■■■■□ 3.85
CHID1-215ENST00000528581 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
CHID1-215ENST00000528581 ABCC9O60706 1549 aa34.04■■■■□ 3.04
CHID1-215ENST00000528581 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
CHID1-215ENST00000528581 DCAF8L2P0C7V8 631 aa32.62■■■□□ 2.81
CHID1-215ENST00000528581 RB1CC1Q8TDY2 1594 aa32.56■■■□□ 2.8
CHID1-215ENST00000528581 NACADO15069 1562 aa32.54■■■□□ 2.8
CHID1-215ENST00000528581 MYO15BQ96JP2 1530 aa32.38■■■□□ 2.77
CHID1-215ENST00000528581 DCAF1Q9Y4B6 1507 aa32.35■■■□□ 2.77
CHID1-215ENST00000528581 DNAJC5BQ9UF47 199 aa31.88■■■□□ 2.69
CHID1-215ENST00000528581 UNC13AQ9UPW8 1703 aa31.85■■■□□ 2.69
CHID1-215ENST00000528581 SCRIBQ14160 1630 aa31.73■■■□□ 2.67
CHID1-215ENST00000528581 PABPN1Q86U42 306 aaKnown RBP eCLIP31.66■■■□□ 2.66
CHID1-215ENST00000528581 BICRAQ9NZM4 1560 aa31.52■■■□□ 2.64
CHID1-215ENST00000528581 SHROOM4Q9ULL8 1493 aa31.25■■■□□ 2.59
CHID1-215ENST00000528581 CC2D2AQ9P2K1 1620 aa30.81■■■□□ 2.52
CHID1-215ENST00000528581 EIF4G1Q04637 1599 aaKnown RBP30.75■■■□□ 2.51
CHID1-215ENST00000528581 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
CHID1-215ENST00000528581 SMARCA4P51532 1647 aa30.34■■■□□ 2.45
CHID1-215ENST00000528581 BAZ1AQ9NRL2 1556 aaPredicted RBP30.33■■■□□ 2.45
CHID1-215ENST00000528581 MROH2BQ7Z745 1585 aa30.16■■■□□ 2.42
CHID1-215ENST00000528581 SMARCA2P51531 1590 aa30.08■■■□□ 2.41
CHID1-215ENST00000528581 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
CHID1-215ENST00000528581 PEG3Q9GZU2 1588 aa29.99■■■□□ 2.39
CHID1-215ENST00000528581 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
CHID1-215ENST00000528581 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
CHID1-215ENST00000528581 BAZ1BQ9UIG0 1483 aaKnown RBP29.88■■■□□ 2.37
CHID1-215ENST00000528581 WIZO95785 1651 aa29.88■■■□□ 2.37
CHID1-215ENST00000528581 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
CHID1-215ENST00000528581 TOP2AP11388 1531 aaKnown RBP29.57■■■□□ 2.32
CHID1-215ENST00000528581 CUX2O14529 1486 aa29.49■■■□□ 2.31
CHID1-215ENST00000528581 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
CHID1-215ENST00000528581 DNAJC5Q9H3Z4 198 aa29.45■■■□□ 2.3
CHID1-215ENST00000528581 SUPT5HO00267 1087 aaKnown RBP29.36■■■□□ 2.29
CHID1-215ENST00000528581 NESP48681 1621 aa29.25■■■□□ 2.27
CHID1-215ENST00000528581 LAMC3Q9Y6N6 1575 aa29.22■■■□□ 2.27
CHID1-215ENST00000528581 CCDC88BA6NC98 1476 aa29.19■■■□□ 2.26
CHID1-215ENST00000528581 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.26
CHID1-215ENST00000528581 CFTRP13569 1480 aa29.02■■■□□ 2.24
CHID1-215ENST00000528581 PDS5BQ9NTI5 1447 aa29■■■□□ 2.23
CHID1-215ENST00000528581 THOC2Q8NI27 1593 aaKnown RBP28.99■■■□□ 2.23
CHID1-215ENST00000528581 KIF21AQ7Z4S6 1674 aa28.97■■■□□ 2.23
CHID1-215ENST00000528581 PRDM2Q13029 1718 aa28.93■■■□□ 2.22
CHID1-215ENST00000528581 FANCD2Q9BXW9 1451 aa28.85■■■□□ 2.21
CHID1-215ENST00000528581 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
CHID1-215ENST00000528581 MRC2Q9UBG0 1479 aa28.71■■■□□ 2.19
CHID1-215ENST00000528581 WDR62O43379 1518 aa28.64■■■□□ 2.17
CHID1-215ENST00000528581 URB2Q14146 1524 aaKnown RBP28.54■■■□□ 2.16
CHID1-215ENST00000528581 DNMBPQ6XZF7 1577 aa28.42■■■□□ 2.14
CHID1-215ENST00000528581 TOPBP1Q92547 1522 aa28.41■■■□□ 2.14
CHID1-215ENST00000528581 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
CHID1-215ENST00000528581 CUX1P39880 1505 aa28.29■■■□□ 2.12
CHID1-215ENST00000528581 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.11e-9■■■■■ 46
CHID1-215ENST00000528581 POLA1P09884 1462 aaPredicted RBP28.18■■■□□ 2.1
CHID1-215ENST00000528581 FGD5Q6ZNL6 1462 aa28.17■■■□□ 2.1
CHID1-215ENST00000528581 IFT140Q96RY7 1462 aa28.17■■■□□ 2.1
CHID1-215ENST00000528581 SYNJ1O43426 1573 aa28.14■■■□□ 2.1
CHID1-215ENST00000528581 OSCARQ8IYS5 282 aa28.13■■■□□ 2.09
CHID1-215ENST00000528581 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
CHID1-215ENST00000528581 TOP2BQ02880 1626 aa28.12■■■□□ 2.09
CHID1-215ENST00000528581 TARBP1Q13395 1621 aaKnown RBP28.09■■■□□ 2.09
CHID1-215ENST00000528581 TRIM41Q8WV44 630 aa28.07■■■□□ 2.08
CHID1-215ENST00000528581 SOGA1O94964 1423 aa28.06■■■□□ 2.08
CHID1-215ENST00000528581 RAD54L2Q9Y4B4 1467 aa28.05■■■□□ 2.08
CHID1-215ENST00000528581 ZNF608Q9ULD9 1512 aaPredicted RBP28.01■■■□□ 2.08
CHID1-215ENST00000528581 EIF4G3O43432 1585 aaKnown RBP27.97■■■□□ 2.07
CHID1-215ENST00000528581 WDR97A6NE52 1622 aa27.94■■■□□ 2.06
CHID1-215ENST00000528581 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.061e-6■■■■■ 31.4
CHID1-215ENST00000528581 ABCA10Q8WWZ4 1543 aa27.88■■■□□ 2.05
CHID1-215ENST00000528581 TDRD9Q8NDG6 1382 aaKnown RBP27.87■■■□□ 2.05
CHID1-215ENST00000528581 ABCA5Q8WWZ7 1642 aa27.78■■■□□ 2.04
CHID1-215ENST00000528581 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.03
CHID1-215ENST00000528581 PBRM1Q86U86 1689 aa27.75■■■□□ 2.03
CHID1-215ENST00000528581 GRIN2BQ13224 1484 aa27.72■■■□□ 2.03
CHID1-215ENST00000528581 RIMBP3CA6NJZ7 1639 aa27.69■■■□□ 2.02
CHID1-215ENST00000528581 RIMBP3BA6NNM3 1639 aa27.69■■■□□ 2.02
CHID1-215ENST00000528581 RIMBP3Q9UFD9 1639 aa27.69■■■□□ 2.02
CHID1-215ENST00000528581 SNAPC4Q5SXM2 1469 aa27.67■■■□□ 2.02
CHID1-215ENST00000528581 MAGI1Q96QZ7 1491 aaPredicted RBP27.63■■■□□ 2.01
CHID1-215ENST00000528581 ARHGEF11O15085 1522 aa27.61■■■□□ 2.01
CHID1-215ENST00000528581 CHD1O14646 1710 aa27.6■■■□□ 2.01
CHID1-215ENST00000528581 KIF27Q86VH2 1401 aa27.59■■■□□ 2.01
CHID1-215ENST00000528581 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
CHID1-215ENST00000528581 FBLN2P98095 1184 aa27.54■■■□□ 2
CHID1-215ENST00000528581 ADAMTS12P58397 1594 aa27.52■■■□□ 2
CHID1-215ENST00000528581 SYNJ2O15056 1496 aa27.51■■□□□ 1.99
CHID1-215ENST00000528581 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
CHID1-215ENST00000528581 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
CHID1-215ENST00000528581 FHAD1B1AJZ9 1412 aa27.44■■□□□ 1.98
CHID1-215ENST00000528581 CUL7Q14999 1698 aa27.41■■□□□ 1.98
CHID1-215ENST00000528581 RUSC2Q8N2Y8 1516 aa27.39■■□□□ 1.98
CHID1-215ENST00000528581 CYB5RLQ6IPT4 315 aa27.39■■□□□ 1.97
CHID1-215ENST00000528581 IGF1RP08069 1367 aa27.39■■□□□ 1.97
CHID1-215ENST00000528581 GRIN2AQ12879 1464 aa27.37■■□□□ 1.97
CHID1-215ENST00000528581 ARAP1Q96P48 1450 aa27.3■■□□□ 1.96
CHID1-215ENST00000528581 CLASP1Q7Z460 1538 aa27.27■■□□□ 1.96
CHID1-215ENST00000528581 CARMIL1Q5VZK9 1371 aa27.27■■□□□ 1.96
CHID1-215ENST00000528581 CEP170Q5SW79 1584 aa27.23■■□□□ 1.95
CHID1-215ENST00000528581 EEA1Q15075 1411 aa27.22■■□□□ 1.95
CHID1-215ENST00000528581 NUP160Q12769 1436 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms