RNA–Protein interactions for RNA: ENST00000354286.8

GATD1-202, Transcript of glutamine amidotransferase like class 1 domain containing 1, humanhuman

TSL 5

Gene GATD1, Length 3,973 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATD1-202ENST00000354286 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.93
GATD1-202ENST00000354286 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.56
GATD1-202ENST00000354286 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
GATD1-202ENST00000354286 SUPT5HO00267 1087 aaKnown RBP18.38■□□□□ 0.53
GATD1-202ENST00000354286 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
GATD1-202ENST00000354286 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
GATD1-202ENST00000354286 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
GATD1-202ENST00000354286 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
GATD1-202ENST00000354286 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
GATD1-202ENST00000354286 LOC105371045A0A1W2PR82 267 aa17.17■□□□□ 0.34
GATD1-202ENST00000354286 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
GATD1-202ENST00000354286 HRCP23327 699 aa17.13■□□□□ 0.33
GATD1-202ENST00000354286 FAM9AQ8IZU1 332 aaPredicted RBP17.1■□□□□ 0.33
GATD1-202ENST00000354286 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
GATD1-202ENST00000354286 PPARGC1BQ86YN6 1023 aaKnown RBP16.94■□□□□ 0.3
GATD1-202ENST00000354286 TRIM26Q12899 539 aaPredicted RBP16.81■□□□□ 0.28
GATD1-202ENST00000354286 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
GATD1-202ENST00000354286 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
GATD1-202ENST00000354286 ABCC9O60706 1549 aa16.75■□□□□ 0.27
GATD1-202ENST00000354286 RSF1Q96T23 1441 aaPredicted RBP16.63■□□□□ 0.25
GATD1-202ENST00000354286 TTBK1Q5TCY1 1321 aaPredicted RBP16.62■□□□□ 0.25
GATD1-202ENST00000354286 ZEB1P37275 1124 aaPredicted RBP16.53■□□□□ 0.24
GATD1-202ENST00000354286 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
GATD1-202ENST00000354286 CCER1Q8TC90 406 aaPredicted RBP16.4■□□□□ 0.22
GATD1-202ENST00000354286 CECR2Q9BXF3 1484 aa16.39■□□□□ 0.22
GATD1-202ENST00000354286 UBTFP17480 764 aaKnown RBP16.34■□□□□ 0.21
GATD1-202ENST00000354286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
GATD1-202ENST00000354286 NACADO15069 1562 aa16.28■□□□□ 0.2
GATD1-202ENST00000354286 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.19
GATD1-202ENST00000354286 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.191e-6■■■□□ 18.8
GATD1-202ENST00000354286 RANGAP1P46060 587 aaPredicted RBP16.25■□□□□ 0.19
GATD1-202ENST00000354286 WIZO95785 1651 aa16.15■□□□□ 0.18
GATD1-202ENST00000354286 APLP2Q06481 763 aa16.13■□□□□ 0.17
GATD1-202ENST00000354286 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
GATD1-202ENST00000354286 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
GATD1-202ENST00000354286 HNRNPUL2Q1KMD3 747 aaKnown RBP16.02■□□□□ 0.15
GATD1-202ENST00000354286 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
GATD1-202ENST00000354286 DIEXFQ68CQ4 756 aaKnown RBP15.95■□□□□ 0.14
GATD1-202ENST00000354286 CENPBP07199 599 aaPredicted RBP15.94■□□□□ 0.14
GATD1-202ENST00000354286 CCDC88BA6NC98 1476 aa15.94■□□□□ 0.14
GATD1-202ENST00000354286 CEP162Q5TB80 1403 aa15.92■□□□□ 0.14
GATD1-202ENST00000354286 SOGA1O94964 1423 aa15.92■□□□□ 0.14
GATD1-202ENST00000354286 YTHDC1Q96MU7 727 aaKnown RBP15.91■□□□□ 0.14
GATD1-202ENST00000354286 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
GATD1-202ENST00000354286 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
GATD1-202ENST00000354286 SMARCA4P51532 1647 aa15.81■□□□□ 0.12
GATD1-202ENST00000354286 TNIKQ9UKE5 1360 aa15.81■□□□□ 0.12
GATD1-202ENST00000354286 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.125e-6■□□□□ 8.4
GATD1-202ENST00000354286 RUSC2Q8N2Y8 1516 aa15.76■□□□□ 0.11
GATD1-202ENST00000354286 EEA1Q15075 1411 aa15.75■□□□□ 0.11
GATD1-202ENST00000354286 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
GATD1-202ENST00000354286 ACIN1Q9UKV3 1341 aaKnown RBP15.75■□□□□ 0.11
GATD1-202ENST00000354286 GOLGA3Q08378 1498 aa15.75■□□□□ 0.11
GATD1-202ENST00000354286 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
GATD1-202ENST00000354286 NEUROD1Q13562 356 aa15.73■□□□□ 0.11
GATD1-202ENST00000354286 ZNF316A6NFI3 1004 aaPredicted RBP15.72■□□□□ 0.11
GATD1-202ENST00000354286 ITGAEP38570 1179 aa15.72■□□□□ 0.11
GATD1-202ENST00000354286 GTF3C3Q9Y5Q9 886 aa15.72■□□□□ 0.11
GATD1-202ENST00000354286 CLIP1P30622 1438 aa15.7■□□□□ 0.1
GATD1-202ENST00000354286 ATP1B4Q9UN42 357 aaPredicted RBP15.67■□□□□ 0.1
GATD1-202ENST00000354286 BAZ1BQ9UIG0 1483 aaKnown RBP15.64■□□□□ 0.09
GATD1-202ENST00000354286 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
GATD1-202ENST00000354286 EIF4G1Q04637 1599 aaKnown RBP15.56■□□□□ 0.08
GATD1-202ENST00000354286 MIER1Q8N108 512 aa15.51■□□□□ 0.07
GATD1-202ENST00000354286 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
GATD1-202ENST00000354286 UNC13AQ9UPW8 1703 aa15.49■□□□□ 0.07
GATD1-202ENST00000354286 RAPGEF2Q9Y4G8 1499 aa15.49■□□□□ 0.07
GATD1-202ENST00000354286 VPS8Q8N3P4 1428 aa15.48■□□□□ 0.07
GATD1-202ENST00000354286 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
GATD1-202ENST00000354286 P3H3Q8IVL6 736 aa15.43■□□□□ 0.06
GATD1-202ENST00000354286 FAM50AQ14320 339 aaKnown RBP15.42■□□□□ 0.06
GATD1-202ENST00000354286 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
GATD1-202ENST00000354286 KANK4Q5T7N3 995 aaPredicted RBP15.38■□□□□ 0.05
GATD1-202ENST00000354286 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
GATD1-202ENST00000354286 KIF21BO75037 1637 aa15.31■□□□□ 0.04
GATD1-202ENST00000354286 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
GATD1-202ENST00000354286 CUX2O14529 1486 aa15.22■□□□□ 0.03
GATD1-202ENST00000354286 CCNB3Q8WWL7 1395 aa15.21■□□□□ 0.03
GATD1-202ENST00000354286 DHX57Q6P158 1386 aaKnown RBP15.19■□□□□ 0.02
GATD1-202ENST00000354286 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
GATD1-202ENST00000354286 CLSPNQ9HAW4 1339 aa15.18■□□□□ 0.02
GATD1-202ENST00000354286 ARAP1Q96P48 1450 aa15.15■□□□□ 0.02
GATD1-202ENST00000354286 CARMIL1Q5VZK9 1371 aa15.15■□□□□ 0.02
GATD1-202ENST00000354286 DDX10Q13206 875 aaKnown RBP15.14■□□□□ 0.01
GATD1-202ENST00000354286 HIRIP3Q9BW71 556 aaPredicted RBP15.14■□□□□ 0.01
GATD1-202ENST00000354286 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
GATD1-202ENST00000354286 BCANQ96GW7 911 aa15.13■□□□□ 0.01
GATD1-202ENST00000354286 SIN3AQ96ST3 1273 aa15.12■□□□□ 0.01
GATD1-202ENST00000354286 CUX1P39880 1505 aa15.11■□□□□ 0.01
GATD1-202ENST00000354286 NCAPD3P42695 1498 aa15.11■□□□□ 0.01
GATD1-202ENST00000354286 NEFLP07196 543 aa15.1■□□□□ 0.01
GATD1-202ENST00000354286 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
GATD1-202ENST00000354286 RAB3GAP2Q9H2M9 1393 aa15.09■□□□□ 0.01
GATD1-202ENST00000354286 ARID3CA6NKF2 412 aa15.08■□□□□ 0
GATD1-202ENST00000354286 IGF1RP08069 1367 aa15.05■□□□□ -0
GATD1-202ENST00000354286 ARHGAP35Q9NRY4 1499 aa15.04■□□□□ -0
GATD1-202ENST00000354286 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
GATD1-202ENST00000354286 CFTRP13569 1480 aa15.03■□□□□ -0
GATD1-202ENST00000354286 TRIM52Q96A61 297 aa15.03■□□□□ -0
GATD1-202ENST00000354286 ANP32CO43423 234 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms