RNA–Protein interactions for RNA: ENST00000574866.1

SRRM2-221, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 638 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-221ENST00000574866 NISCHQ9Y2I1 1504 aa43.74■■■■■ 4.59
SRRM2-221ENST00000574866 CCDC180Q9P1Z9 1646 aa39■■■■□ 3.83
SRRM2-221ENST00000574866 ABCC9O60706 1549 aa38.39■■■■□ 3.74
SRRM2-221ENST00000574866 RB1CC1Q8TDY2 1594 aa36.83■■■■□ 3.49
SRRM2-221ENST00000574866 NACADO15069 1562 aa36.72■■■■□ 3.47
SRRM2-221ENST00000574866 DCAF8L2P0C7V8 631 aa36.56■■■■□ 3.44
SRRM2-221ENST00000574866 MYO15BQ96JP2 1530 aa36.44■■■■□ 3.42
SRRM2-221ENST00000574866 ZCCHC6Q5VYS8 1495 aaKnown RBP36.43■■■■□ 3.42
SRRM2-221ENST00000574866 DCAF1Q9Y4B6 1507 aa36.2■■■■□ 3.39
SRRM2-221ENST00000574866 UNC13AQ9UPW8 1703 aa35.94■■■■□ 3.34
SRRM2-221ENST00000574866 PABPN1Q86U42 306 aaKnown RBP eCLIP35.8■■■■□ 3.32
SRRM2-221ENST00000574866 BICRAQ9NZM4 1560 aa35.73■■■■□ 3.31
SRRM2-221ENST00000574866 SCRIBQ14160 1630 aa35.57■■■■□ 3.29
SRRM2-221ENST00000574866 DNAJC5BQ9UF47 199 aa35.43■■■■□ 3.26
SRRM2-221ENST00000574866 SHROOM4Q9ULL8 1493 aa35.36■■■■□ 3.25
SRRM2-221ENST00000574866 EIF4G1Q04637 1599 aaKnown RBP34.81■■■■□ 3.16
SRRM2-221ENST00000574866 CC2D2AQ9P2K1 1620 aa34.71■■■■□ 3.15
SRRM2-221ENST00000574866 CECR2Q9BXF3 1484 aa34.52■■■■□ 3.12
SRRM2-221ENST00000574866 SMARCA4P51532 1647 aa34.01■■■■□ 3.03
SRRM2-221ENST00000574866 BAZ1AQ9NRL2 1556 aaPredicted RBP33.93■■■■□ 3.02
SRRM2-221ENST00000574866 NCAPD3P42695 1498 aa33.89■■■■□ 3.02
SRRM2-221ENST00000574866 ATAD2BQ9ULI0 1458 aa33.88■■■■□ 3.01
SRRM2-221ENST00000574866 SMARCA2P51531 1590 aa33.82■■■■□ 3
SRRM2-221ENST00000574866 HMGXB3Q12766 1538 aa33.73■■■□□ 2.99
SRRM2-221ENST00000574866 MROH2BQ7Z745 1585 aa33.71■■■□□ 2.99
SRRM2-221ENST00000574866 PEG3Q9GZU2 1588 aa33.69■■■□□ 2.98
SRRM2-221ENST00000574866 BAZ1BQ9UIG0 1483 aaKnown RBP33.59■■■□□ 2.97
SRRM2-221ENST00000574866 WIZO95785 1651 aa33.32■■■□□ 2.92
SRRM2-221ENST00000574866 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
SRRM2-221ENST00000574866 NESP48681 1621 aa33.15■■■□□ 2.9
SRRM2-221ENST00000574866 ERCC6Q03468 1493 aa33.12■■■□□ 2.89
SRRM2-221ENST00000574866 LAMC3Q9Y6N6 1575 aa33.04■■■□□ 2.88
SRRM2-221ENST00000574866 TOP2AP11388 1531 aaKnown RBP32.99■■■□□ 2.87
SRRM2-221ENST00000574866 CADPSQ9ULU8 1353 aa32.88■■■□□ 2.85
SRRM2-221ENST00000574866 CUX2O14529 1486 aa32.86■■■□□ 2.85
SRRM2-221ENST00000574866 PDS5BQ9NTI5 1447 aa32.82■■■□□ 2.84
SRRM2-221ENST00000574866 KIF21AQ7Z4S6 1674 aa32.74■■■□□ 2.83
SRRM2-221ENST00000574866 THOC2Q8NI27 1593 aaKnown RBP32.74■■■□□ 2.83
SRRM2-221ENST00000574866 CFTRP13569 1480 aa32.65■■■□□ 2.82
SRRM2-221ENST00000574866 CCDC88BA6NC98 1476 aa32.57■■■□□ 2.8
SRRM2-221ENST00000574866 FANCD2Q9BXW9 1451 aa32.52■■■□□ 2.8
SRRM2-221ENST00000574866 MRC2Q9UBG0 1479 aa32.52■■■□□ 2.8
SRRM2-221ENST00000574866 CEP164Q9UPV0 1460 aa32.51■■■□□ 2.79
SRRM2-221ENST00000574866 WDR62O43379 1518 aa32.43■■■□□ 2.78
SRRM2-221ENST00000574866 PRDM2Q13029 1718 aa32.34■■■□□ 2.77
SRRM2-221ENST00000574866 URB2Q14146 1524 aaKnown RBP32.22■■■□□ 2.75
SRRM2-221ENST00000574866 SUPT5HO00267 1087 aaKnown RBP32.15■■■□□ 2.74
SRRM2-221ENST00000574866 DNAJC5Q9H3Z4 198 aa32.09■■■□□ 2.73
SRRM2-221ENST00000574866 TOPBP1Q92547 1522 aa31.97■■■□□ 2.71
SRRM2-221ENST00000574866 ABCC8Q09428 1581 aa31.93■■■□□ 2.7
SRRM2-221ENST00000574866 DNMBPQ6XZF7 1577 aa31.92■■■□□ 2.7
SRRM2-221ENST00000574866 IFT140Q96RY7 1462 aa31.84■■■□□ 2.69
SRRM2-221ENST00000574866 ZNF608Q9ULD9 1512 aaPredicted RBP31.71■■■□□ 2.67
SRRM2-221ENST00000574866 POLA1P09884 1462 aaPredicted RBP31.7■■■□□ 2.66
SRRM2-221ENST00000574866 CUX1P39880 1505 aa31.65■■■□□ 2.66
SRRM2-221ENST00000574866 TARBP1Q13395 1621 aaKnown RBP31.64■■■□□ 2.66
SRRM2-221ENST00000574866 EIF4G3O43432 1585 aaKnown RBP31.6■■■□□ 2.65
SRRM2-221ENST00000574866 FGD5Q6ZNL6 1462 aa31.58■■■□□ 2.65
SRRM2-221ENST00000574866 RAD54L2Q9Y4B4 1467 aa31.54■■■□□ 2.64
SRRM2-221ENST00000574866 SOGA1O94964 1423 aa31.53■■■□□ 2.64
SRRM2-221ENST00000574866 AQRO60306 1485 aaKnown RBP eCLIP31.48■■■□□ 2.631e-11■■■■□ 24
SRRM2-221ENST00000574866 WDR97A6NE52 1622 aa31.39■■■□□ 2.62
SRRM2-221ENST00000574866 OSCARQ8IYS5 282 aa31.39■■■□□ 2.62
SRRM2-221ENST00000574866 TDRD9Q8NDG6 1382 aaKnown RBP31.38■■■□□ 2.61
SRRM2-221ENST00000574866 WRNQ14191 1432 aaPredicted RBP eCLIP31.34■■■□□ 2.61
SRRM2-221ENST00000574866 TOP2BQ02880 1626 aa31.31■■■□□ 2.6
SRRM2-221ENST00000574866 BIVM-ERCC5R4GMW8 1640 aa31.31■■■□□ 2.6
SRRM2-221ENST00000574866 SYNJ1O43426 1573 aa31.3■■■□□ 2.6
SRRM2-221ENST00000574866 ABCA10Q8WWZ4 1543 aa31.26■■■□□ 2.59
SRRM2-221ENST00000574866 SNAPC4Q5SXM2 1469 aa31.22■■■□□ 2.59
SRRM2-221ENST00000574866 GRIN2BQ13224 1484 aa31.21■■■□□ 2.59
SRRM2-221ENST00000574866 CHD1O14646 1710 aa31.19■■■□□ 2.58
SRRM2-221ENST00000574866 GAPVD1Q14C86 1478 aa31.17■■■□□ 2.58
SRRM2-221ENST00000574866 ABCA5Q8WWZ7 1642 aa31.16■■■□□ 2.58
SRRM2-221ENST00000574866 MAGI1Q96QZ7 1491 aaPredicted RBP31.15■■■□□ 2.58
SRRM2-221ENST00000574866 PBRM1Q86U86 1689 aa31.12■■■□□ 2.57
SRRM2-221ENST00000574866 FBLN2P98095 1184 aa31.11■■■□□ 2.57
SRRM2-221ENST00000574866 SYNJ2O15056 1496 aa31.04■■■□□ 2.56
SRRM2-221ENST00000574866 CHMP7Q8WUX9 453 aaPredicted RBP31■■■□□ 2.55
SRRM2-221ENST00000574866 RIMBP3CA6NJZ7 1639 aa30.97■■■□□ 2.55
SRRM2-221ENST00000574866 RIMBP3BA6NNM3 1639 aa30.97■■■□□ 2.55
SRRM2-221ENST00000574866 RIMBP3Q9UFD9 1639 aa30.97■■■□□ 2.55
SRRM2-221ENST00000574866 ARHGEF11O15085 1522 aa30.96■■■□□ 2.55
SRRM2-221ENST00000574866 TRIM41Q8WV44 630 aa30.94■■■□□ 2.54
SRRM2-221ENST00000574866 CLASP1Q7Z460 1538 aa30.91■■■□□ 2.54
SRRM2-221ENST00000574866 ADAMTS12P58397 1594 aa30.9■■■□□ 2.54
SRRM2-221ENST00000574866 ERICH3Q5RHP9 1530 aa30.88■■■□□ 2.53
SRRM2-221ENST00000574866 GRIN2AQ12879 1464 aa30.82■■■□□ 2.53
SRRM2-221ENST00000574866 FHAD1B1AJZ9 1412 aa30.81■■■□□ 2.52
SRRM2-221ENST00000574866 ARAP1Q96P48 1450 aa30.7■■■□□ 2.51
SRRM2-221ENST00000574866 NUP160Q12769 1436 aa30.7■■■□□ 2.5
SRRM2-221ENST00000574866 KIF27Q86VH2 1401 aa30.7■■■□□ 2.5
SRRM2-221ENST00000574866 CEP170Q5SW79 1584 aa30.68■■■□□ 2.5
SRRM2-221ENST00000574866 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
SRRM2-221ENST00000574866 IGF1RP08069 1367 aa30.59■■■□□ 2.49
SRRM2-221ENST00000574866 CUL7Q14999 1698 aa30.55■■■□□ 2.48
SRRM2-221ENST00000574866 SHROOM2Q13796 1616 aa30.48■■■□□ 2.47
SRRM2-221ENST00000574866 RUSC2Q8N2Y8 1516 aa30.46■■■□□ 2.47
SRRM2-221ENST00000574866 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.46
SRRM2-221ENST00000574866 CARMIL1Q5VZK9 1371 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms