RNA–Protein interactions for RNA: ENST00000449825.5

CHID1-204, Transcript of chitinase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHID1, Length 3,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-204ENST00000449825 NISCHQ9Y2I1 1504 aa23.42■■□□□ 1.34
CHID1-204ENST00000449825 SHROOM4Q9ULL8 1493 aa20.6■□□□□ 0.89
CHID1-204ENST00000449825 DCAF8L2P0C7V8 631 aa20.52■□□□□ 0.88
CHID1-204ENST00000449825 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
CHID1-204ENST00000449825 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
CHID1-204ENST00000449825 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
CHID1-204ENST00000449825 PELP1Q8IZL8 1130 aaKnown RBP19.46■□□□□ 0.71
CHID1-204ENST00000449825 HRCP23327 699 aa19.41■□□□□ 0.7
CHID1-204ENST00000449825 PPARGC1BQ86YN6 1023 aaKnown RBP19.32■□□□□ 0.68
CHID1-204ENST00000449825 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
CHID1-204ENST00000449825 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
CHID1-204ENST00000449825 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
CHID1-204ENST00000449825 LOC105371045A0A1W2PR82 267 aa18.97■□□□□ 0.63
CHID1-204ENST00000449825 DCAF1Q9Y4B6 1507 aa18.91■□□□□ 0.62
CHID1-204ENST00000449825 ABCC9O60706 1549 aa18.91■□□□□ 0.62
CHID1-204ENST00000449825 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
CHID1-204ENST00000449825 EHMT2Q96KQ7 1210 aa18.87■□□□□ 0.61
CHID1-204ENST00000449825 MYT1Q01538 1121 aa18.86■□□□□ 0.61
CHID1-204ENST00000449825 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
CHID1-204ENST00000449825 FAM9AQ8IZU1 332 aaPredicted RBP18.77■□□□□ 0.6
CHID1-204ENST00000449825 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
CHID1-204ENST00000449825 TRIM41Q8WV44 630 aa18.62■□□□□ 0.57
CHID1-204ENST00000449825 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
CHID1-204ENST00000449825 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
CHID1-204ENST00000449825 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
CHID1-204ENST00000449825 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
CHID1-204ENST00000449825 NACADO15069 1562 aa18.32■□□□□ 0.52
CHID1-204ENST00000449825 PABPN1Q86U42 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
CHID1-204ENST00000449825 WIZO95785 1651 aa18.24■□□□□ 0.51
CHID1-204ENST00000449825 TTBK1Q5TCY1 1321 aaPredicted RBP18.19■□□□□ 0.5
CHID1-204ENST00000449825 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
CHID1-204ENST00000449825 NEUROD1Q13562 356 aa18.12■□□□□ 0.49
CHID1-204ENST00000449825 ACIN1Q9UKV3 1341 aaKnown RBP18.09■□□□□ 0.49
CHID1-204ENST00000449825 ZEB1P37275 1124 aaPredicted RBP18.07■□□□□ 0.48
CHID1-204ENST00000449825 BAZ1AQ9NRL2 1556 aaPredicted RBP17.97■□□□□ 0.47
CHID1-204ENST00000449825 ABCC8Q09428 1581 aa17.94■□□□□ 0.46
CHID1-204ENST00000449825 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
CHID1-204ENST00000449825 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
CHID1-204ENST00000449825 CENPBP07199 599 aaPredicted RBP17.86■□□□□ 0.45
CHID1-204ENST00000449825 UBTFP17480 764 aaKnown RBP17.86■□□□□ 0.45
CHID1-204ENST00000449825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
CHID1-204ENST00000449825 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.45
CHID1-204ENST00000449825 SMARCA4P51532 1647 aa17.83■□□□□ 0.45
CHID1-204ENST00000449825 UNC13AQ9UPW8 1703 aa17.82■□□□□ 0.44
CHID1-204ENST00000449825 BCL11AQ9H165 835 aa17.81■□□□□ 0.44
CHID1-204ENST00000449825 SOGA1O94964 1423 aa17.79■□□□□ 0.44
CHID1-204ENST00000449825 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
CHID1-204ENST00000449825 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
CHID1-204ENST00000449825 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
CHID1-204ENST00000449825 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
CHID1-204ENST00000449825 YTHDC1Q96MU7 727 aaKnown RBP17.67■□□□□ 0.42
CHID1-204ENST00000449825 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
CHID1-204ENST00000449825 BICRAQ9NZM4 1560 aa17.64■□□□□ 0.41
CHID1-204ENST00000449825 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
CHID1-204ENST00000449825 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
CHID1-204ENST00000449825 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.41e-9■■■■■ 46
CHID1-204ENST00000449825 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
CHID1-204ENST00000449825 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
CHID1-204ENST00000449825 PRKCSHP14314 528 aaPredicted RBP17.48■□□□□ 0.39
CHID1-204ENST00000449825 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
CHID1-204ENST00000449825 TNIKQ9UKE5 1360 aa17.45■□□□□ 0.38
CHID1-204ENST00000449825 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
CHID1-204ENST00000449825 GOLGA3Q08378 1498 aa17.38■□□□□ 0.37
CHID1-204ENST00000449825 APLP2Q06481 763 aa17.38■□□□□ 0.37
CHID1-204ENST00000449825 ANP32EQ9BTT0 268 aa17.35■□□□□ 0.37
CHID1-204ENST00000449825 EEA1Q15075 1411 aa17.34■□□□□ 0.37
CHID1-204ENST00000449825 CLIP1P30622 1438 aa17.31■□□□□ 0.36
CHID1-204ENST00000449825 RAPGEF2Q9Y4G8 1499 aa17.3■□□□□ 0.36
CHID1-204ENST00000449825 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.36
CHID1-204ENST00000449825 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.35
CHID1-204ENST00000449825 ZNF316A6NFI3 1004 aaPredicted RBP17.22■□□□□ 0.35
CHID1-204ENST00000449825 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
CHID1-204ENST00000449825 ITGAEP38570 1179 aa17.18■□□□□ 0.34
CHID1-204ENST00000449825 VPS8Q8N3P4 1428 aa17.11■□□□□ 0.33
CHID1-204ENST00000449825 KANK4Q5T7N3 995 aaPredicted RBP17.1■□□□□ 0.33
CHID1-204ENST00000449825 MIER1Q8N108 512 aa17.09■□□□□ 0.33
CHID1-204ENST00000449825 KIF21BO75037 1637 aa17.08■□□□□ 0.32
CHID1-204ENST00000449825 TSHZ2Q9NRE2 1034 aa17.07■□□□□ 0.32
CHID1-204ENST00000449825 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
CHID1-204ENST00000449825 TOP2BQ02880 1626 aa17.06■□□□□ 0.32
CHID1-204ENST00000449825 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
CHID1-204ENST00000449825 CUX1P39880 1505 aa17.03■□□□□ 0.32
CHID1-204ENST00000449825 KIF27Q86VH2 1401 aa17■□□□□ 0.31
CHID1-204ENST00000449825 SUPT16HQ9Y5B9 1047 aaKnown RBP16.99■□□□□ 0.31
CHID1-204ENST00000449825 ERICH6Q7L0X2 663 aa16.99■□□□□ 0.31
CHID1-204ENST00000449825 CUX2O14529 1486 aa16.95■□□□□ 0.3
CHID1-204ENST00000449825 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
CHID1-204ENST00000449825 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
CHID1-204ENST00000449825 CFTRP13569 1480 aa16.93■□□□□ 0.3
CHID1-204ENST00000449825 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
CHID1-204ENST00000449825 BCANQ96GW7 911 aa16.91■□□□□ 0.3
CHID1-204ENST00000449825 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
CHID1-204ENST00000449825 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
CHID1-204ENST00000449825 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
CHID1-204ENST00000449825 IGF1RP08069 1367 aa16.84■□□□□ 0.29
CHID1-204ENST00000449825 CARMIL1Q5VZK9 1371 aa16.82■□□□□ 0.28
CHID1-204ENST00000449825 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
CHID1-204ENST00000449825 FGD5Q6ZNL6 1462 aa16.81■□□□□ 0.28
CHID1-204ENST00000449825 ARHGAP35Q9NRY4 1499 aa16.81■□□□□ 0.28
CHID1-204ENST00000449825 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms