RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
LINC00963-202ENST00000419300 PELP1Q8IZL8 1130 aaKnown RBP16.36■□□□□ 0.21
LINC00963-202ENST00000419300 MYT1Q01538 1121 aa16.02■□□□□ 0.16
LINC00963-202ENST00000419300 DCAF8L2P0C7V8 631 aa16.01■□□□□ 0.15
LINC00963-202ENST00000419300 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
LINC00963-202ENST00000419300 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
LINC00963-202ENST00000419300 CENPBP07199 599 aaPredicted RBP15.58■□□□□ 0.08
LINC00963-202ENST00000419300 CCER1Q8TC90 406 aaPredicted RBP15.5■□□□□ 0.07
LINC00963-202ENST00000419300 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
LINC00963-202ENST00000419300 APLP2Q06481 763 aa15.42■□□□□ 0.06
LINC00963-202ENST00000419300 ERICH6Q7L0X2 663 aa15.29■□□□□ 0.04
LINC00963-202ENST00000419300 PCGF6Q9BYE7 350 aa15.27■□□□□ 0.03
LINC00963-202ENST00000419300 FAM9AQ8IZU1 332 aaPredicted RBP15.17■□□□□ 0.02
LINC00963-202ENST00000419300 NEFLP07196 543 aa15.07■□□□□ 0
LINC00963-202ENST00000419300 YTHDC1Q96MU7 727 aaKnown RBP14.93□□□□□ -0.02
LINC00963-202ENST00000419300 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
LINC00963-202ENST00000419300 HRCP23327 699 aa14.88□□□□□ -0.03
LINC00963-202ENST00000419300 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
LINC00963-202ENST00000419300 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
LINC00963-202ENST00000419300 TTBK1Q5TCY1 1321 aaPredicted RBP14.69□□□□□ -0.06
LINC00963-202ENST00000419300 DAXXQ9UER7 740 aaPredicted RBP14.64□□□□□ -0.07
LINC00963-202ENST00000419300 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
LINC00963-202ENST00000419300 CCDC180Q9P1Z9 1646 aa14.6□□□□□ -0.07
LINC00963-202ENST00000419300 CLSPNQ9HAW4 1339 aa14.5□□□□□ -0.09
LINC00963-202ENST00000419300 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
LINC00963-202ENST00000419300 DIEXFQ68CQ4 756 aaKnown RBP14.39□□□□□ -0.11
LINC00963-202ENST00000419300 DCAF1Q9Y4B6 1507 aa14.33□□□□□ -0.12
LINC00963-202ENST00000419300 ZNF316A6NFI3 1004 aaPredicted RBP14.32□□□□□ -0.12
LINC00963-202ENST00000419300 CHIC1Q5VXU3 224 aa14.29□□□□□ -0.12
LINC00963-202ENST00000419300 ATP1B4Q9UN42 357 aaPredicted RBP14.27□□□□□ -0.12
LINC00963-202ENST00000419300 RANGAP1P46060 587 aaPredicted RBP14.27□□□□□ -0.13
LINC00963-202ENST00000419300 MYT1LQ9UL68 1186 aa14.24□□□□□ -0.13
LINC00963-202ENST00000419300 CDK11AQ9UQ88 783 aaPredicted RBP14.11□□□□□ -0.15
LINC00963-202ENST00000419300 GTF3C3Q9Y5Q9 886 aa14.11□□□□□ -0.15
LINC00963-202ENST00000419300 ACIN1Q9UKV3 1341 aaKnown RBP14.06□□□□□ -0.16
LINC00963-202ENST00000419300 PPARGC1BQ86YN6 1023 aaKnown RBP14.06□□□□□ -0.16
LINC00963-202ENST00000419300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
LINC00963-202ENST00000419300 LOC105371045A0A1W2PR82 267 aa14.03□□□□□ -0.16
LINC00963-202ENST00000419300 ANP32CO43423 234 aa14.02□□□□□ -0.16
LINC00963-202ENST00000419300 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
LINC00963-202ENST00000419300 ANP32AP39687 249 aaKnown RBP13.99□□□□□ -0.17
LINC00963-202ENST00000419300 GLIPR1L2Q4G1C9 344 aa13.98□□□□□ -0.17
LINC00963-202ENST00000419300 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
LINC00963-202ENST00000419300 SCRIBQ14160 1630 aa13.94□□□□□ -0.18
LINC00963-202ENST00000419300 ITGAEP38570 1179 aa13.92□□□□□ -0.18
LINC00963-202ENST00000419300 POLR3GLQ9BT43 218 aa13.88□□□□□ -0.19
LINC00963-202ENST00000419300 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
LINC00963-202ENST00000419300 FAM50AQ14320 339 aaKnown RBP13.78□□□□□ -0.2
LINC00963-202ENST00000419300 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.2
LINC00963-202ENST00000419300 BCANQ96GW7 911 aa13.72□□□□□ -0.21
LINC00963-202ENST00000419300 CANXP27824 592 aaKnown RBP13.69□□□□□ -0.22
LINC00963-202ENST00000419300 UPF2Q9HAU5 1272 aaKnown RBP13.68□□□□□ -0.22
LINC00963-202ENST00000419300 EEA1Q15075 1411 aa13.66□□□□□ -0.22
LINC00963-202ENST00000419300 NEUROD1Q13562 356 aa13.65□□□□□ -0.22
LINC00963-202ENST00000419300 TONSLQ96HA7 1378 aa13.64□□□□□ -0.23
LINC00963-202ENST00000419300 TRIM52Q96A61 297 aa13.64□□□□□ -0.23
LINC00963-202ENST00000419300 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
LINC00963-202ENST00000419300 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
LINC00963-202ENST00000419300 NEFMP07197 916 aa13.58□□□□□ -0.24
LINC00963-202ENST00000419300 ANP32EQ9BTT0 268 aa13.58□□□□□ -0.24
LINC00963-202ENST00000419300 ABCC9O60706 1549 aa13.56□□□□□ -0.24
LINC00963-202ENST00000419300 NACADO15069 1562 aa13.55□□□□□ -0.24
LINC00963-202ENST00000419300 FKBP8Q14318 412 aa13.55□□□□□ -0.24
LINC00963-202ENST00000419300 SCAF1Q9H7N4 1312 aaKnown RBP13.54□□□□□ -0.24
LINC00963-202ENST00000419300 GOLGA3Q08378 1498 aa13.54□□□□□ -0.24
LINC00963-202ENST00000419300 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
LINC00963-202ENST00000419300 EIF5BO60841 1220 aaKnown RBP13.53□□□□□ -0.24
LINC00963-202ENST00000419300 DDRGK1Q96HY6 314 aa13.53□□□□□ -0.24
LINC00963-202ENST00000419300 CNGB1Q14028 1251 aaPredicted RBP13.5□□□□□ -0.25
LINC00963-202ENST00000419300 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.49□□□□□ -0.25
LINC00963-202ENST00000419300 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
LINC00963-202ENST00000419300 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
LINC00963-202ENST00000419300 CLIP1P30622 1438 aa13.46□□□□□ -0.26
LINC00963-202ENST00000419300 CCDC136Q96JN2 1154 aa13.45□□□□□ -0.26
LINC00963-202ENST00000419300 ZNF326Q5BKZ1 582 aaKnown RBP13.45□□□□□ -0.26
LINC00963-202ENST00000419300 HNRNPUQ00839 825 aaKnown RBP eCLIP13.44□□□□□ -0.262e-9■■■□□ 15
LINC00963-202ENST00000419300 BECN1Q14457 450 aa13.44□□□□□ -0.26
LINC00963-202ENST00000419300 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
LINC00963-202ENST00000419300 CEP164Q9UPV0 1460 aa13.41□□□□□ -0.26
LINC00963-202ENST00000419300 CEP162Q5TB80 1403 aa13.4□□□□□ -0.26
LINC00963-202ENST00000419300 TNNT2P45379 298 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-202ENST00000419300 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-202ENST00000419300 NBR1Q14596 966 aa13.36□□□□□ -0.27
LINC00963-202ENST00000419300 RSF1Q96T23 1441 aaPredicted RBP13.36□□□□□ -0.27
LINC00963-202ENST00000419300 ERICH6BQ5W0A0 696 aa13.33□□□□□ -0.28
LINC00963-202ENST00000419300 GOLGA6L22H0YM25 854 aa13.31□□□□□ -0.28
LINC00963-202ENST00000419300 TRIM44Q96DX7 344 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-202ENST00000419300 PPM1GO15355 546 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-202ENST00000419300 TMC1Q8TDI8 760 aa13.3□□□□□ -0.28
LINC00963-202ENST00000419300 MYH16Q9H6N6 1097 aa13.28□□□□□ -0.28
LINC00963-202ENST00000419300 DDX10Q13206 875 aaKnown RBP13.26□□□□□ -0.29
LINC00963-202ENST00000419300 MIER1Q8N108 512 aa13.26□□□□□ -0.29
LINC00963-202ENST00000419300 MRS2Q9HD23 443 aa13.25□□□□□ -0.29
LINC00963-202ENST00000419300 TNIKQ9UKE5 1360 aa13.25□□□□□ -0.29
LINC00963-202ENST00000419300 WDR43Q15061 677 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC00963-202ENST00000419300 FAM9BQ8IZU0 186 aa13.24□□□□□ -0.29
LINC00963-202ENST00000419300 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
LINC00963-202ENST00000419300 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
LINC00963-202ENST00000419300 NOP58Q9Y2X3 529 aaKnown RBP13.21□□□□□ -0.29
LINC00963-202ENST00000419300 EIF4G2P78344 907 aaKnown RBP eCLIP13.2□□□□□ -0.31e-7■■■■□ 25.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms