RNA–Protein interactions for RNA: ENST00000556968.2

SERPINA3-208, Transcript of serpin family A member 3, humanhuman

TSL 1 (best)

Gene SERPINA3, Length 1,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA3-208ENST00000556968 NISCHQ9Y2I1 1504 aa27.44■■□□□ 1.98
SERPINA3-208ENST00000556968 CCDC180Q9P1Z9 1646 aa24.57■■□□□ 1.52
SERPINA3-208ENST00000556968 ABCC9O60706 1549 aa24.33■■□□□ 1.49
SERPINA3-208ENST00000556968 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
SERPINA3-208ENST00000556968 RB1CC1Q8TDY2 1594 aa23.28■■□□□ 1.32
SERPINA3-208ENST00000556968 NACADO15069 1562 aa23.18■■□□□ 1.3
SERPINA3-208ENST00000556968 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
SERPINA3-208ENST00000556968 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
SERPINA3-208ENST00000556968 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
SERPINA3-208ENST00000556968 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
SERPINA3-208ENST00000556968 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
SERPINA3-208ENST00000556968 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
SERPINA3-208ENST00000556968 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
SERPINA3-208ENST00000556968 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.2
SERPINA3-208ENST00000556968 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
SERPINA3-208ENST00000556968 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
SERPINA3-208ENST00000556968 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
SERPINA3-208ENST00000556968 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
SERPINA3-208ENST00000556968 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
SERPINA3-208ENST00000556968 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
SERPINA3-208ENST00000556968 NCAPD3P42695 1498 aa21.39■■□□□ 1.01
SERPINA3-208ENST00000556968 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
SERPINA3-208ENST00000556968 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
SERPINA3-208ENST00000556968 SMARCA2P51531 1590 aa21.3■■□□□ 1
SERPINA3-208ENST00000556968 BAZ1AQ9NRL2 1556 aaPredicted RBP21.3■■□□□ 1
SERPINA3-208ENST00000556968 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
SERPINA3-208ENST00000556968 PEG3Q9GZU2 1588 aa21.18■□□□□ 0.98
SERPINA3-208ENST00000556968 BAZ1BQ9UIG0 1483 aaKnown RBP21.14■□□□□ 0.98
SERPINA3-208ENST00000556968 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
SERPINA3-208ENST00000556968 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
SERPINA3-208ENST00000556968 NESP48681 1621 aa20.95■□□□□ 0.94
SERPINA3-208ENST00000556968 CUX2O14529 1486 aa20.92■□□□□ 0.94
SERPINA3-208ENST00000556968 WIZO95785 1651 aa20.89■□□□□ 0.93
SERPINA3-208ENST00000556968 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.93
SERPINA3-208ENST00000556968 RSF1Q96T23 1441 aaPredicted RBP20.77■□□□□ 0.91
SERPINA3-208ENST00000556968 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
SERPINA3-208ENST00000556968 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
SERPINA3-208ENST00000556968 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
SERPINA3-208ENST00000556968 KIF21AQ7Z4S6 1674 aa20.7■□□□□ 0.91
SERPINA3-208ENST00000556968 DNAJC5Q9H3Z4 198 aa20.7■□□□□ 0.9
SERPINA3-208ENST00000556968 TOP2AP11388 1531 aaKnown RBP20.64■□□□□ 0.9
SERPINA3-208ENST00000556968 CFTRP13569 1480 aa20.55■□□□□ 0.88
SERPINA3-208ENST00000556968 MRC2Q9UBG0 1479 aa20.54■□□□□ 0.88
SERPINA3-208ENST00000556968 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
SERPINA3-208ENST00000556968 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
SERPINA3-208ENST00000556968 WDR62O43379 1518 aa20.49■□□□□ 0.87
SERPINA3-208ENST00000556968 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
SERPINA3-208ENST00000556968 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
SERPINA3-208ENST00000556968 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
SERPINA3-208ENST00000556968 ABCC8Q09428 1581 aa20.13■□□□□ 0.81
SERPINA3-208ENST00000556968 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
SERPINA3-208ENST00000556968 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
SERPINA3-208ENST00000556968 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.8
SERPINA3-208ENST00000556968 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.79
SERPINA3-208ENST00000556968 OSCARQ8IYS5 282 aa20■□□□□ 0.79
SERPINA3-208ENST00000556968 SUPT5HO00267 1087 aaKnown RBP19.97■□□□□ 0.79
SERPINA3-208ENST00000556968 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
SERPINA3-208ENST00000556968 EIF4G3O43432 1585 aaKnown RBP19.93■□□□□ 0.78
SERPINA3-208ENST00000556968 POLA1P09884 1462 aaPredicted RBP19.92■□□□□ 0.78
SERPINA3-208ENST00000556968 AQRO60306 1485 aaKnown RBP eCLIP19.86■□□□□ 0.771e-6■■□□□ 14.2
SERPINA3-208ENST00000556968 SOGA1O94964 1423 aa19.85■□□□□ 0.77
SERPINA3-208ENST00000556968 CUX1P39880 1505 aa19.84■□□□□ 0.77
SERPINA3-208ENST00000556968 RAD54L2Q9Y4B4 1467 aa19.84■□□□□ 0.77
SERPINA3-208ENST00000556968 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
SERPINA3-208ENST00000556968 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.76
SERPINA3-208ENST00000556968 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
SERPINA3-208ENST00000556968 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
SERPINA3-208ENST00000556968 CHD1O14646 1710 aa19.74■□□□□ 0.75
SERPINA3-208ENST00000556968 SENP3Q9H4L4 574 aaPredicted RBP19.74■□□□□ 0.75
SERPINA3-208ENST00000556968 RIMBP3CA6NJZ7 1639 aa19.7■□□□□ 0.74
SERPINA3-208ENST00000556968 RIMBP3BA6NNM3 1639 aa19.7■□□□□ 0.74
SERPINA3-208ENST00000556968 RIMBP3Q9UFD9 1639 aa19.7■□□□□ 0.74
SERPINA3-208ENST00000556968 FBLN2P98095 1184 aa19.69■□□□□ 0.74
SERPINA3-208ENST00000556968 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
SERPINA3-208ENST00000556968 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
SERPINA3-208ENST00000556968 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
SERPINA3-208ENST00000556968 MAGI1Q96QZ7 1491 aaPredicted RBP19.65■□□□□ 0.74
SERPINA3-208ENST00000556968 PHF23Q9BUL5 403 aaPredicted RBP19.64■□□□□ 0.73
SERPINA3-208ENST00000556968 ABCA10Q8WWZ4 1543 aa19.63■□□□□ 0.73
SERPINA3-208ENST00000556968 GAPVD1Q14C86 1478 aa19.61■□□□□ 0.73
SERPINA3-208ENST00000556968 CHMP7Q8WUX9 453 aaPredicted RBP19.6■□□□□ 0.73
SERPINA3-208ENST00000556968 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
SERPINA3-208ENST00000556968 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
SERPINA3-208ENST00000556968 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
SERPINA3-208ENST00000556968 BIVM-ERCC5R4GMW8 1640 aa19.59■□□□□ 0.73
SERPINA3-208ENST00000556968 SYNJ2O15056 1496 aa19.58■□□□□ 0.72
SERPINA3-208ENST00000556968 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.72
SERPINA3-208ENST00000556968 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
SERPINA3-208ENST00000556968 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
SERPINA3-208ENST00000556968 CYB5RLQ6IPT4 315 aa19.5■□□□□ 0.71
SERPINA3-208ENST00000556968 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
SERPINA3-208ENST00000556968 ADAMTS12P58397 1594 aa19.41■□□□□ 0.7
SERPINA3-208ENST00000556968 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
SERPINA3-208ENST00000556968 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
SERPINA3-208ENST00000556968 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
SERPINA3-208ENST00000556968 NUP160Q12769 1436 aa19.34■□□□□ 0.69
SERPINA3-208ENST00000556968 CEP170Q5SW79 1584 aa19.32■□□□□ 0.68
SERPINA3-208ENST00000556968 SHROOM2Q13796 1616 aa19.24■□□□□ 0.67
SERPINA3-208ENST00000556968 TRHP20396 242 aaPredicted RBP19.22■□□□□ 0.67
SERPINA3-208ENST00000556968 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms