RNA–Protein interactions for RNA: ENST00000436108.6

CHID1-203, Transcript of chitinase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHID1, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-203ENST00000436108 NISCHQ9Y2I1 1504 aa44.9■■■■■ 4.78
CHID1-203ENST00000436108 CCDC180Q9P1Z9 1646 aa39.98■■■■□ 3.99
CHID1-203ENST00000436108 ABCC9O60706 1549 aa39.55■■■■□ 3.92
CHID1-203ENST00000436108 RB1CC1Q8TDY2 1594 aa37.77■■■■□ 3.64
CHID1-203ENST00000436108 NACADO15069 1562 aa37.67■■■■□ 3.62
CHID1-203ENST00000436108 DCAF8L2P0C7V8 631 aa37.61■■■■□ 3.61
CHID1-203ENST00000436108 ZCCHC6Q5VYS8 1495 aaKnown RBP37.34■■■■□ 3.57
CHID1-203ENST00000436108 MYO15BQ96JP2 1530 aa37.32■■■■□ 3.56
CHID1-203ENST00000436108 UNC13AQ9UPW8 1703 aa37.11■■■■□ 3.53
CHID1-203ENST00000436108 DCAF1Q9Y4B6 1507 aa37.07■■■■□ 3.52
CHID1-203ENST00000436108 PABPN1Q86U42 306 aaKnown RBP eCLIP36.94■■■■□ 3.5
CHID1-203ENST00000436108 BICRAQ9NZM4 1560 aa36.83■■■■□ 3.49
CHID1-203ENST00000436108 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.48
CHID1-203ENST00000436108 SCRIBQ14160 1630 aa36.55■■■■□ 3.44
CHID1-203ENST00000436108 SHROOM4Q9ULL8 1493 aa36.16■■■■□ 3.38
CHID1-203ENST00000436108 EIF4G1Q04637 1599 aaKnown RBP35.79■■■■□ 3.32
CHID1-203ENST00000436108 CC2D2AQ9P2K1 1620 aa35.76■■■■□ 3.31
CHID1-203ENST00000436108 CECR2Q9BXF3 1484 aa35.52■■■■□ 3.28
CHID1-203ENST00000436108 SMARCA4P51532 1647 aa34.91■■■■□ 3.18
CHID1-203ENST00000436108 ATAD2BQ9ULI0 1458 aa34.82■■■■□ 3.16
CHID1-203ENST00000436108 NCAPD3P42695 1498 aa34.81■■■■□ 3.16
CHID1-203ENST00000436108 BAZ1AQ9NRL2 1556 aaPredicted RBP34.75■■■■□ 3.15
CHID1-203ENST00000436108 MROH2BQ7Z745 1585 aa34.67■■■■□ 3.14
CHID1-203ENST00000436108 SMARCA2P51531 1590 aa34.65■■■■□ 3.14
CHID1-203ENST00000436108 HMGXB3Q12766 1538 aa34.57■■■■□ 3.12
CHID1-203ENST00000436108 PEG3Q9GZU2 1588 aa34.55■■■■□ 3.12
CHID1-203ENST00000436108 BAZ1BQ9UIG0 1483 aaKnown RBP34.44■■■■□ 3.1
CHID1-203ENST00000436108 WIZO95785 1651 aa34.28■■■■□ 3.08
CHID1-203ENST00000436108 NESP48681 1621 aa34.2■■■■□ 3.06
CHID1-203ENST00000436108 RSF1Q96T23 1441 aaPredicted RBP34.13■■■■□ 3.05
CHID1-203ENST00000436108 ERCC6Q03468 1493 aa33.98■■■■□ 3.03
CHID1-203ENST00000436108 LAMC3Q9Y6N6 1575 aa33.89■■■■□ 3.02
CHID1-203ENST00000436108 TOP2AP11388 1531 aaKnown RBP33.8■■■■□ 3
CHID1-203ENST00000436108 CADPSQ9ULU8 1353 aa33.77■■■■□ 3
CHID1-203ENST00000436108 CUX2O14529 1486 aa33.75■■■□□ 2.99
CHID1-203ENST00000436108 KIF21AQ7Z4S6 1674 aa33.73■■■□□ 2.99
CHID1-203ENST00000436108 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
CHID1-203ENST00000436108 PDS5BQ9NTI5 1447 aa33.64■■■□□ 2.98
CHID1-203ENST00000436108 CFTRP13569 1480 aa33.52■■■□□ 2.96
CHID1-203ENST00000436108 CCDC88BA6NC98 1476 aa33.47■■■□□ 2.95
CHID1-203ENST00000436108 FANCD2Q9BXW9 1451 aa33.39■■■□□ 2.94
CHID1-203ENST00000436108 MRC2Q9UBG0 1479 aa33.38■■■□□ 2.93
CHID1-203ENST00000436108 CEP164Q9UPV0 1460 aa33.33■■■□□ 2.93
CHID1-203ENST00000436108 WDR62O43379 1518 aa33.31■■■□□ 2.92
CHID1-203ENST00000436108 PRDM2Q13029 1718 aa33.22■■■□□ 2.91
CHID1-203ENST00000436108 DNAJC5Q9H3Z4 198 aa33.19■■■□□ 2.9
CHID1-203ENST00000436108 URB2Q14146 1524 aaKnown RBP33.16■■■□□ 2.9
CHID1-203ENST00000436108 SUPT5HO00267 1087 aaKnown RBP32.99■■■□□ 2.87
CHID1-203ENST00000436108 TOPBP1Q92547 1522 aa32.85■■■□□ 2.85
CHID1-203ENST00000436108 DNMBPQ6XZF7 1577 aa32.73■■■□□ 2.83
CHID1-203ENST00000436108 ABCC8Q09428 1581 aa32.68■■■□□ 2.82
CHID1-203ENST00000436108 ZNF608Q9ULD9 1512 aaPredicted RBP32.67■■■□□ 2.82
CHID1-203ENST00000436108 IFT140Q96RY7 1462 aa32.65■■■□□ 2.82
CHID1-203ENST00000436108 TARBP1Q13395 1621 aaKnown RBP32.55■■■□□ 2.8
CHID1-203ENST00000436108 POLA1P09884 1462 aaPredicted RBP32.55■■■□□ 2.8
CHID1-203ENST00000436108 CUX1P39880 1505 aa32.54■■■□□ 2.8
CHID1-203ENST00000436108 RAD54L2Q9Y4B4 1467 aa32.47■■■□□ 2.79
CHID1-203ENST00000436108 EIF4G3O43432 1585 aaKnown RBP32.45■■■□□ 2.78
CHID1-203ENST00000436108 AQRO60306 1485 aaKnown RBP eCLIP32.41■■■□□ 2.781e-6■■■■■ 31.4
CHID1-203ENST00000436108 FGD5Q6ZNL6 1462 aa32.41■■■□□ 2.78
CHID1-203ENST00000436108 SOGA1O94964 1423 aa32.38■■■□□ 2.77
CHID1-203ENST00000436108 OSCARQ8IYS5 282 aa32.31■■■□□ 2.76
CHID1-203ENST00000436108 TDRD9Q8NDG6 1382 aaKnown RBP32.29■■■□□ 2.76
CHID1-203ENST00000436108 WDR97A6NE52 1622 aa32.2■■■□□ 2.74
CHID1-203ENST00000436108 SYNJ1O43426 1573 aa32.14■■■□□ 2.74
CHID1-203ENST00000436108 CHD1O14646 1710 aa32.14■■■□□ 2.74
CHID1-203ENST00000436108 BIVM-ERCC5R4GMW8 1640 aa32.11■■■□□ 2.73
CHID1-203ENST00000436108 WRNQ14191 1432 aaPredicted RBP eCLIP32.1■■■□□ 2.731e-9■■■■■ 46
CHID1-203ENST00000436108 TOP2BQ02880 1626 aa32.09■■■□□ 2.73
CHID1-203ENST00000436108 ABCA10Q8WWZ4 1543 aa32.07■■■□□ 2.72
CHID1-203ENST00000436108 SNAPC4Q5SXM2 1469 aa32.06■■■□□ 2.72
CHID1-203ENST00000436108 GRIN2BQ13224 1484 aa32■■■□□ 2.71
CHID1-203ENST00000436108 ABCA5Q8WWZ7 1642 aa32■■■□□ 2.71
CHID1-203ENST00000436108 GAPVD1Q14C86 1478 aa32■■■□□ 2.71
CHID1-203ENST00000436108 FBLN2P98095 1184 aa31.99■■■□□ 2.71
CHID1-203ENST00000436108 PBRM1Q86U86 1689 aa31.97■■■□□ 2.71
CHID1-203ENST00000436108 TRIM41Q8WV44 630 aa31.94■■■□□ 2.7
CHID1-203ENST00000436108 MAGI1Q96QZ7 1491 aaPredicted RBP31.94■■■□□ 2.7
CHID1-203ENST00000436108 RIMBP3CA6NJZ7 1639 aa31.92■■■□□ 2.7
CHID1-203ENST00000436108 RIMBP3BA6NNM3 1639 aa31.92■■■□□ 2.7
CHID1-203ENST00000436108 RIMBP3Q9UFD9 1639 aa31.92■■■□□ 2.7
CHID1-203ENST00000436108 ARHGEF11O15085 1522 aa31.86■■■□□ 2.69
CHID1-203ENST00000436108 SYNJ2O15056 1496 aa31.84■■■□□ 2.69
CHID1-203ENST00000436108 CHMP7Q8WUX9 453 aaPredicted RBP31.83■■■□□ 2.69
CHID1-203ENST00000436108 CLASP1Q7Z460 1538 aa31.77■■■□□ 2.68
CHID1-203ENST00000436108 ADAMTS12P58397 1594 aa31.7■■■□□ 2.67
CHID1-203ENST00000436108 ERICH3Q5RHP9 1530 aa31.64■■■□□ 2.66
CHID1-203ENST00000436108 GRIN2AQ12879 1464 aa31.62■■■□□ 2.65
CHID1-203ENST00000436108 ARAP1Q96P48 1450 aa31.62■■■□□ 2.65
CHID1-203ENST00000436108 FHAD1B1AJZ9 1412 aa31.59■■■□□ 2.65
CHID1-203ENST00000436108 CYB5RLQ6IPT4 315 aa31.58■■■□□ 2.65
CHID1-203ENST00000436108 CEP170Q5SW79 1584 aa31.55■■■□□ 2.64
CHID1-203ENST00000436108 NUP160Q12769 1436 aa31.52■■■□□ 2.64
CHID1-203ENST00000436108 IGF1RP08069 1367 aa31.44■■■□□ 2.62
CHID1-203ENST00000436108 ERCC6L2Q5T890 1561 aa31.41■■■□□ 2.62
CHID1-203ENST00000436108 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
CHID1-203ENST00000436108 SHROOM2Q13796 1616 aa31.33■■■□□ 2.61
CHID1-203ENST00000436108 CUL7Q14999 1698 aa31.26■■■□□ 2.59
CHID1-203ENST00000436108 RUSC2Q8N2Y8 1516 aa31.26■■■□□ 2.59
CHID1-203ENST00000436108 CARMIL1Q5VZK9 1371 aa31.2■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms