RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
SF3A2-204ENST00000589118 ABCC9O60706 1549 aa35.25■■■■□ 3.23
SF3A2-204ENST00000589118 CCDC180Q9P1Z9 1646 aa34.63■■■■□ 3.13
SF3A2-204ENST00000589118 DNAJC5BQ9UF47 199 aa33.54■■■□□ 2.96
SF3A2-204ENST00000589118 RB1CC1Q8TDY2 1594 aa33.19■■■□□ 2.9
SF3A2-204ENST00000589118 DCAF8L2P0C7V8 631 aa32.87■■■□□ 2.85
SF3A2-204ENST00000589118 NACADO15069 1562 aa32.83■■■□□ 2.85
SF3A2-204ENST00000589118 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.84
SF3A2-204ENST00000589118 UNC13AQ9UPW8 1703 aa32.63■■■□□ 2.81
SF3A2-204ENST00000589118 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
SF3A2-204ENST00000589118 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
SF3A2-204ENST00000589118 ZCCHC6Q5VYS8 1495 aaKnown RBP31.77■■■□□ 2.68
SF3A2-204ENST00000589118 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
SF3A2-204ENST00000589118 CECR2Q9BXF3 1484 aa31.71■■■□□ 2.67
SF3A2-204ENST00000589118 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
SF3A2-204ENST00000589118 DCAF1Q9Y4B6 1507 aa31.61■■■□□ 2.65
SF3A2-204ENST00000589118 SHROOM4Q9ULL8 1493 aa31.56■■■□□ 2.64
SF3A2-204ENST00000589118 EIF4G1Q04637 1599 aaKnown RBP31.55■■■□□ 2.64
SF3A2-204ENST00000589118 DNAJC5Q9H3Z4 198 aa30.94■■■□□ 2.54
SF3A2-204ENST00000589118 ERCC6Q03468 1493 aa30.36■■■□□ 2.45
SF3A2-204ENST00000589118 CUX2O14529 1486 aa30.34■■■□□ 2.45
SF3A2-204ENST00000589118 NCAPD3P42695 1498 aa30.34■■■□□ 2.45
SF3A2-204ENST00000589118 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
SF3A2-204ENST00000589118 NESP48681 1621 aa30.2■■■□□ 2.43
SF3A2-204ENST00000589118 SMARCA4P51532 1647 aa30.12■■■□□ 2.41
SF3A2-204ENST00000589118 SMARCA2P51531 1590 aa30.05■■■□□ 2.4
SF3A2-204ENST00000589118 HMGXB3Q12766 1538 aa30.04■■■□□ 2.4
SF3A2-204ENST00000589118 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
SF3A2-204ENST00000589118 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
SF3A2-204ENST00000589118 BAZ1AQ9NRL2 1556 aaPredicted RBP29.83■■■□□ 2.37
SF3A2-204ENST00000589118 KIF21AQ7Z4S6 1674 aa29.76■■■□□ 2.36
SF3A2-204ENST00000589118 MROH2BQ7Z745 1585 aa29.73■■■□□ 2.35
SF3A2-204ENST00000589118 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
SF3A2-204ENST00000589118 LAMC3Q9Y6N6 1575 aa29.71■■■□□ 2.35
SF3A2-204ENST00000589118 TRIM41Q8WV44 630 aa29.55■■■□□ 2.32
SF3A2-204ENST00000589118 PDS5BQ9NTI5 1447 aa29.54■■■□□ 2.32
SF3A2-204ENST00000589118 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
SF3A2-204ENST00000589118 WIZO95785 1651 aa29.4■■■□□ 2.3
SF3A2-204ENST00000589118 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
SF3A2-204ENST00000589118 WDR62O43379 1518 aa29.3■■■□□ 2.28
SF3A2-204ENST00000589118 CEP164Q9UPV0 1460 aa29.16■■■□□ 2.26
SF3A2-204ENST00000589118 FANCD2Q9BXW9 1451 aa29.12■■■□□ 2.25
SF3A2-204ENST00000589118 OSCARQ8IYS5 282 aa28.99■■■□□ 2.23
SF3A2-204ENST00000589118 CFTRP13569 1480 aa28.98■■■□□ 2.23
SF3A2-204ENST00000589118 URB2Q14146 1524 aaKnown RBP28.96■■■□□ 2.23
SF3A2-204ENST00000589118 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
SF3A2-204ENST00000589118 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
SF3A2-204ENST00000589118 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
SF3A2-204ENST00000589118 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
SF3A2-204ENST00000589118 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
SF3A2-204ENST00000589118 ZNF608Q9ULD9 1512 aaPredicted RBP28.72■■■□□ 2.19
SF3A2-204ENST00000589118 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
SF3A2-204ENST00000589118 CCDC88BA6NC98 1476 aa28.61■■■□□ 2.17
SF3A2-204ENST00000589118 IFT140Q96RY7 1462 aa28.56■■■□□ 2.16
SF3A2-204ENST00000589118 ARHGEF11O15085 1522 aa28.54■■■□□ 2.16
SF3A2-204ENST00000589118 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
SF3A2-204ENST00000589118 EIF4G3O43432 1585 aaKnown RBP28.47■■■□□ 2.15
SF3A2-204ENST00000589118 CYB5RLQ6IPT4 315 aa28.45■■■□□ 2.14
SF3A2-204ENST00000589118 CHD1O14646 1710 aa28.41■■■□□ 2.14
SF3A2-204ENST00000589118 AQRO60306 1485 aaKnown RBP eCLIP28.4■■■□□ 2.142e-9■■■■■ 35.8
SF3A2-204ENST00000589118 DNMBPQ6XZF7 1577 aa28.36■■■□□ 2.13
SF3A2-204ENST00000589118 TARBP1Q13395 1621 aaKnown RBP28.33■■■□□ 2.13
SF3A2-204ENST00000589118 FBLN2P98095 1184 aa28.33■■■□□ 2.13
SF3A2-204ENST00000589118 ABCC8Q09428 1581 aa28.3■■■□□ 2.12
SF3A2-204ENST00000589118 TRHP20396 242 aaPredicted RBP28.27■■■□□ 2.12
SF3A2-204ENST00000589118 ARAP1Q96P48 1450 aa28.26■■■□□ 2.11
SF3A2-204ENST00000589118 POLA1P09884 1462 aaPredicted RBP28.22■■■□□ 2.11
SF3A2-204ENST00000589118 RAD54L2Q9Y4B4 1467 aa28.22■■■□□ 2.11
SF3A2-204ENST00000589118 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
SF3A2-204ENST00000589118 SOGA1O94964 1423 aa28.09■■■□□ 2.09
SF3A2-204ENST00000589118 SNAPC4Q5SXM2 1469 aa28.04■■■□□ 2.08
SF3A2-204ENST00000589118 FGD5Q6ZNL6 1462 aa28.01■■■□□ 2.07
SF3A2-204ENST00000589118 CLASP1Q7Z460 1538 aa27.97■■■□□ 2.07
SF3A2-204ENST00000589118 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
SF3A2-204ENST00000589118 CUX1P39880 1505 aa27.93■■■□□ 2.06
SF3A2-204ENST00000589118 SYNJ1O43426 1573 aa27.87■■■□□ 2.05
SF3A2-204ENST00000589118 GRIN2BQ13224 1484 aa27.83■■■□□ 2.05
SF3A2-204ENST00000589118 MAGI1Q96QZ7 1491 aaPredicted RBP27.83■■■□□ 2.05
SF3A2-204ENST00000589118 WDR97A6NE52 1622 aa27.81■■■□□ 2.04
SF3A2-204ENST00000589118 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
SF3A2-204ENST00000589118 SYNJ2O15056 1496 aa27.79■■■□□ 2.04
SF3A2-204ENST00000589118 GAPVD1Q14C86 1478 aa27.72■■■□□ 2.03
SF3A2-204ENST00000589118 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
SF3A2-204ENST00000589118 ERCC6L2Q5T890 1561 aa27.66■■■□□ 2.02
SF3A2-204ENST00000589118 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
SF3A2-204ENST00000589118 ABCA10Q8WWZ4 1543 aa27.58■■■□□ 2.01
SF3A2-204ENST00000589118 GRIN2AQ12879 1464 aa27.51■■□□□ 1.99
SF3A2-204ENST00000589118 CEP170Q5SW79 1584 aa27.5■■□□□ 1.99
SF3A2-204ENST00000589118 SUPT5HO00267 1087 aaKnown RBP27.49■■□□□ 1.99
SF3A2-204ENST00000589118 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
SF3A2-204ENST00000589118 NUP160Q12769 1436 aa27.4■■□□□ 1.98
SF3A2-204ENST00000589118 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.97
SF3A2-204ENST00000589118 SHROOM2Q13796 1616 aa27.35■■□□□ 1.97
SF3A2-204ENST00000589118 KIF13AQ9H1H9 1805 aa27.32■■□□□ 1.96
SF3A2-204ENST00000589118 BIVM-ERCC5R4GMW8 1640 aa27.32■■□□□ 1.96
SF3A2-204ENST00000589118 FHAD1B1AJZ9 1412 aa27.31■■□□□ 1.96
SF3A2-204ENST00000589118 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
SF3A2-204ENST00000589118 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
SF3A2-204ENST00000589118 ERICH3Q5RHP9 1530 aa27.2■■□□□ 1.94
SF3A2-204ENST00000589118 JPH4Q96JJ6 628 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms