Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RNF216Q9NWF9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
RNF216Q9NWF9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RNF216Q9NWF9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
RNF216Q9NWF9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RNF216Q9NWF9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.26■■■□□ 2.27
RNF216Q9NWF9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RNF216Q9NWF9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
RNF216Q9NWF9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.24■■■□□ 2.27
RNF216Q9NWF9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RNF216Q9NWF9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RNF216Q9NWF9 AC120057.1-201ENST00000483947 663 ntBASIC29.23■■■□□ 2.27
RNF216Q9NWF9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.23■■■□□ 2.27
RNF216Q9NWF9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.22■■■□□ 2.27
RNF216Q9NWF9 STK33P1-201ENST00000423835 1218 ntBASIC29.22■■■□□ 2.27
RNF216Q9NWF9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RNF216Q9NWF9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
RNF216Q9NWF9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
RNF216Q9NWF9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RNF216Q9NWF9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
RNF216Q9NWF9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RNF216Q9NWF9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
RNF216Q9NWF9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RNF216Q9NWF9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.18■■■□□ 2.26
RNF216Q9NWF9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RNF216Q9NWF9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RNF216Q9NWF9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.16■■■□□ 2.26
RNF216Q9NWF9 AC021231.2-201ENST00000594613 730 ntBASIC29.16■■■□□ 2.26
RNF216Q9NWF9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
RNF216Q9NWF9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
RNF216Q9NWF9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RNF216Q9NWF9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RNF216Q9NWF9 AC139426.1-201ENST00000568218 2529 ntBASIC29.13■■■□□ 2.25
RNF216Q9NWF9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
RNF216Q9NWF9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RNF216Q9NWF9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.12■■■□□ 2.25
RNF216Q9NWF9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RNF216Q9NWF9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
RNF216Q9NWF9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.1■■■□□ 2.25
RNF216Q9NWF9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.1■■■□□ 2.25
RNF216Q9NWF9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.1■■■□□ 2.25
RNF216Q9NWF9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
RNF216Q9NWF9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RNF216Q9NWF9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RNF216Q9NWF9 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC29.09■■■□□ 2.25
RNF216Q9NWF9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
RNF216Q9NWF9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RNF216Q9NWF9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RNF216Q9NWF9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
RNF216Q9NWF9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.08■■■□□ 2.25
RNF216Q9NWF9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
RNF216Q9NWF9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
RNF216Q9NWF9 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC29.08■■■□□ 2.25
RNF216Q9NWF9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RNF216Q9NWF9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RNF216Q9NWF9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RNF216Q9NWF9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.07■■■□□ 2.24
RNF216Q9NWF9 AC244517.3-201ENST00000616254 1235 ntBASIC29.07■■■□□ 2.24
RNF216Q9NWF9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.06■■■□□ 2.24
RNF216Q9NWF9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RNF216Q9NWF9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RNF216Q9NWF9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
RNF216Q9NWF9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
RNF216Q9NWF9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.05■■■□□ 2.24
RNF216Q9NWF9 MIR6090-201ENST00000622481 60 ntBASIC29.05■■■□□ 2.24
RNF216Q9NWF9 ABCB10P3-201ENST00000561950 2166 ntBASIC29.05■■■□□ 2.24
RNF216Q9NWF9 AL589935.2-201ENST00000616471 1231 ntBASIC29.04■■■□□ 2.24
RNF216Q9NWF9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.03■■■□□ 2.24
RNF216Q9NWF9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RNF216Q9NWF9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RNF216Q9NWF9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.02■■■□□ 2.24
RNF216Q9NWF9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RNF216Q9NWF9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RNF216Q9NWF9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RNF216Q9NWF9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
RNF216Q9NWF9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.01■■■□□ 2.23
RNF216Q9NWF9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RNF216Q9NWF9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
RNF216Q9NWF9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
RNF216Q9NWF9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RNF216Q9NWF9 MIR639-201ENST00000384974 98 ntBASIC28.99■■■□□ 2.23
RNF216Q9NWF9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RNF216Q9NWF9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
RNF216Q9NWF9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.98■■■□□ 2.23
RNF216Q9NWF9 LINC01971-201ENST00000617888 1048 ntBASIC28.98■■■□□ 2.23
RNF216Q9NWF9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.97■■■□□ 2.23
RNF216Q9NWF9 MIR4449-201ENST00000578365 66 ntBASIC28.97■■■□□ 2.23
RNF216Q9NWF9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
RNF216Q9NWF9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.96■■■□□ 2.23
RNF216Q9NWF9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.96■■■□□ 2.23
RNF216Q9NWF9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
RNF216Q9NWF9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF216Q9NWF9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF216Q9NWF9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF216Q9NWF9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF216Q9NWF9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
RNF216Q9NWF9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
RNF216Q9NWF9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RNF216Q9NWF9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.93■■■□□ 2.22
RNF216Q9NWF9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.93■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms