Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.1■■□□□ 1.13
ZNF561Q8N587 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.09■■□□□ 1.13
ZNF561Q8N587 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
ZNF561Q8N587 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZNF561Q8N587 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.09■■□□□ 1.13
ZNF561Q8N587 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.09■■□□□ 1.13
ZNF561Q8N587 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
ZNF561Q8N587 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.07■■□□□ 1.12
ZNF561Q8N587 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ZNF561Q8N587 ST7-AS1-201ENST00000456775 1889 ntBASIC22.07■■□□□ 1.12
ZNF561Q8N587 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZNF561Q8N587 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
ZNF561Q8N587 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZNF561Q8N587 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
ZNF561Q8N587 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ZNF561Q8N587 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.05■■□□□ 1.12
ZNF561Q8N587 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.05■■□□□ 1.12
ZNF561Q8N587 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
ZNF561Q8N587 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
ZNF561Q8N587 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF561Q8N587 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF561Q8N587 AC005559.1-201ENST00000589661 871 ntBASIC22.04■■□□□ 1.12
ZNF561Q8N587 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF561Q8N587 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.04■■□□□ 1.12
ZNF561Q8N587 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF561Q8N587 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF561Q8N587 AC135731.1-201ENST00000569415 2548 ntBASIC22.04■■□□□ 1.12
ZNF561Q8N587 ABCB10P1-201ENST00000614297 2181 ntBASIC22.04■■□□□ 1.12
ZNF561Q8N587 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF561Q8N587 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF561Q8N587 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.02■■□□□ 1.12
ZNF561Q8N587 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ZNF561Q8N587 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF561Q8N587 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF561Q8N587 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
ZNF561Q8N587 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF561Q8N587 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF561Q8N587 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.01■■□□□ 1.11
ZNF561Q8N587 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.01■■□□□ 1.11
ZNF561Q8N587 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF561Q8N587 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF561Q8N587 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF561Q8N587 AC010864.1-201ENST00000609407 1511 ntBASIC22.01■■□□□ 1.11
ZNF561Q8N587 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF561Q8N587 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF561Q8N587 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZNF561Q8N587 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF561Q8N587 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF561Q8N587 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF561Q8N587 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF561Q8N587 AP006261.1-201ENST00000584783 668 ntBASIC21.99■■□□□ 1.11
ZNF561Q8N587 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF561Q8N587 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF561Q8N587 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF561Q8N587 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
ZNF561Q8N587 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF561Q8N587 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF561Q8N587 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF561Q8N587 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF561Q8N587 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.97■■□□□ 1.11
ZNF561Q8N587 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF561Q8N587 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
ZNF561Q8N587 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF561Q8N587 MIR3665-201ENST00000578708 105 ntBASIC21.97■■□□□ 1.11
ZNF561Q8N587 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF561Q8N587 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF561Q8N587 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
ZNF561Q8N587 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
ZNF561Q8N587 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
ZNF561Q8N587 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF561Q8N587 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
ZNF561Q8N587 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
ZNF561Q8N587 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF561Q8N587 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF561Q8N587 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF561Q8N587 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF561Q8N587 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF561Q8N587 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
ZNF561Q8N587 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF561Q8N587 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF561Q8N587 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF561Q8N587 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF561Q8N587 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF561Q8N587 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF561Q8N587 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.91■■□□□ 1.1
ZNF561Q8N587 DUX4L28-201ENST00000623687 678 ntBASIC21.91■■□□□ 1.1
ZNF561Q8N587 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF561Q8N587 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.9■■□□□ 1.1
ZNF561Q8N587 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF561Q8N587 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF561Q8N587 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
ZNF561Q8N587 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF561Q8N587 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.89■■□□□ 1.09
ZNF561Q8N587 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF561Q8N587 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF561Q8N587 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF561Q8N587 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.87■■□□□ 1.09
ZNF561Q8N587 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.87■■□□□ 1.09
ZNF561Q8N587 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF561Q8N587 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms