Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SRRM1Q8IYB3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SRRM1Q8IYB3 AL139393.2-201ENST00000608721 2025 ntBASIC26.53■■□□□ 1.84
SRRM1Q8IYB3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SRRM1Q8IYB3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.84
SRRM1Q8IYB3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.51■■□□□ 1.83
SRRM1Q8IYB3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SRRM1Q8IYB3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
SRRM1Q8IYB3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SRRM1Q8IYB3 DRD5P2-201ENST00000421395 2012 ntBASIC26.48■■□□□ 1.83
SRRM1Q8IYB3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SRRM1Q8IYB3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
SRRM1Q8IYB3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
SRRM1Q8IYB3 AL031258.1-201ENST00000623562 325 ntBASIC26.44■■□□□ 1.82
SRRM1Q8IYB3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SRRM1Q8IYB3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SRRM1Q8IYB3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SRRM1Q8IYB3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SRRM1Q8IYB3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.42■■□□□ 1.82
SRRM1Q8IYB3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
SRRM1Q8IYB3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.41■■□□□ 1.82
SRRM1Q8IYB3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SRRM1Q8IYB3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SRRM1Q8IYB3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SRRM1Q8IYB3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.39■■□□□ 1.82
SRRM1Q8IYB3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.81
SRRM1Q8IYB3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
SRRM1Q8IYB3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.38■■□□□ 1.81
SRRM1Q8IYB3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SRRM1Q8IYB3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
SRRM1Q8IYB3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SRRM1Q8IYB3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SRRM1Q8IYB3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SRRM1Q8IYB3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.36■■□□□ 1.81
SRRM1Q8IYB3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SRRM1Q8IYB3 AL121749.1-202ENST00000609313 2153 ntBASIC26.36■■□□□ 1.81
SRRM1Q8IYB3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SRRM1Q8IYB3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SRRM1Q8IYB3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SRRM1Q8IYB3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SRRM1Q8IYB3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
SRRM1Q8IYB3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRRM1Q8IYB3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.34■■□□□ 1.81
SRRM1Q8IYB3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRRM1Q8IYB3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRRM1Q8IYB3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SRRM1Q8IYB3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRRM1Q8IYB3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SRRM1Q8IYB3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
SRRM1Q8IYB3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.32■■□□□ 1.8
SRRM1Q8IYB3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SRRM1Q8IYB3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SRRM1Q8IYB3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SRRM1Q8IYB3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRRM1Q8IYB3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.29■■□□□ 1.8
SRRM1Q8IYB3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRRM1Q8IYB3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
SRRM1Q8IYB3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SRRM1Q8IYB3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SRRM1Q8IYB3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SRRM1Q8IYB3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.28■■□□□ 1.8
SRRM1Q8IYB3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SRRM1Q8IYB3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SRRM1Q8IYB3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SRRM1Q8IYB3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SRRM1Q8IYB3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SRRM1Q8IYB3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.26■■□□□ 1.79
SRRM1Q8IYB3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SRRM1Q8IYB3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SRRM1Q8IYB3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SRRM1Q8IYB3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SRRM1Q8IYB3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SRRM1Q8IYB3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SRRM1Q8IYB3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SRRM1Q8IYB3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SRRM1Q8IYB3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRRM1Q8IYB3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
SRRM1Q8IYB3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SRRM1Q8IYB3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
SRRM1Q8IYB3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SRRM1Q8IYB3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SRRM1Q8IYB3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SRRM1Q8IYB3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SRRM1Q8IYB3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.2■■□□□ 1.78
SRRM1Q8IYB3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SRRM1Q8IYB3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SRRM1Q8IYB3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SRRM1Q8IYB3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SRRM1Q8IYB3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SRRM1Q8IYB3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SRRM1Q8IYB3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SRRM1Q8IYB3 WASH5P-204ENST00000632292 975 ntBASIC26.18■■□□□ 1.78
SRRM1Q8IYB3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SRRM1Q8IYB3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SRRM1Q8IYB3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SRRM1Q8IYB3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SRRM1Q8IYB3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SRRM1Q8IYB3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SRRM1Q8IYB3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
SRRM1Q8IYB3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms