Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CROCCP3Q8IVE0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CROCCP3Q8IVE0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CROCCP3Q8IVE0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CROCCP3Q8IVE0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.86■■□□□ 1.41
CROCCP3Q8IVE0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CROCCP3Q8IVE0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CROCCP3Q8IVE0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CROCCP3Q8IVE0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC23.85■■□□□ 1.41
CROCCP3Q8IVE0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CROCCP3Q8IVE0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CROCCP3Q8IVE0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CROCCP3Q8IVE0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CROCCP3Q8IVE0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CROCCP3Q8IVE0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC23.82■■□□□ 1.4
CROCCP3Q8IVE0 AC015813.7-201ENST00000623294 581 ntBASIC23.82■■□□□ 1.4
CROCCP3Q8IVE0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CROCCP3Q8IVE0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CROCCP3Q8IVE0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CROCCP3Q8IVE0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CROCCP3Q8IVE0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CROCCP3Q8IVE0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CROCCP3Q8IVE0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CROCCP3Q8IVE0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CROCCP3Q8IVE0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.79■■□□□ 1.4
CROCCP3Q8IVE0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.78■■□□□ 1.4
CROCCP3Q8IVE0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.78■■□□□ 1.4
CROCCP3Q8IVE0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CROCCP3Q8IVE0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CROCCP3Q8IVE0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CROCCP3Q8IVE0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CROCCP3Q8IVE0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CROCCP3Q8IVE0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CROCCP3Q8IVE0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CROCCP3Q8IVE0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CROCCP3Q8IVE0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CROCCP3Q8IVE0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CROCCP3Q8IVE0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.75■■□□□ 1.39
CROCCP3Q8IVE0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CROCCP3Q8IVE0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.74■■□□□ 1.39
CROCCP3Q8IVE0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.74■■□□□ 1.39
CROCCP3Q8IVE0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CROCCP3Q8IVE0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CROCCP3Q8IVE0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
CROCCP3Q8IVE0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CROCCP3Q8IVE0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CROCCP3Q8IVE0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CROCCP3Q8IVE0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CROCCP3Q8IVE0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.72■■□□□ 1.39
CROCCP3Q8IVE0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CROCCP3Q8IVE0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CROCCP3Q8IVE0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CROCCP3Q8IVE0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CROCCP3Q8IVE0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.71■■□□□ 1.39
CROCCP3Q8IVE0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CROCCP3Q8IVE0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CROCCP3Q8IVE0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CROCCP3Q8IVE0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CROCCP3Q8IVE0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.68■■□□□ 1.38
CROCCP3Q8IVE0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CROCCP3Q8IVE0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CROCCP3Q8IVE0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CROCCP3Q8IVE0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.67■■□□□ 1.38
CROCCP3Q8IVE0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CROCCP3Q8IVE0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CROCCP3Q8IVE0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CROCCP3Q8IVE0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.66■■□□□ 1.38
CROCCP3Q8IVE0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CROCCP3Q8IVE0 AL449106.1-201ENST00000608517 1980 ntBASIC23.65■■□□□ 1.38
CROCCP3Q8IVE0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CROCCP3Q8IVE0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CROCCP3Q8IVE0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CROCCP3Q8IVE0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CROCCP3Q8IVE0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CROCCP3Q8IVE0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CROCCP3Q8IVE0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
CROCCP3Q8IVE0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
CROCCP3Q8IVE0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CROCCP3Q8IVE0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.62■■□□□ 1.37
CROCCP3Q8IVE0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.61■■□□□ 1.37
CROCCP3Q8IVE0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CROCCP3Q8IVE0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CROCCP3Q8IVE0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CROCCP3Q8IVE0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CROCCP3Q8IVE0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CROCCP3Q8IVE0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CROCCP3Q8IVE0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CROCCP3Q8IVE0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CROCCP3Q8IVE0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CROCCP3Q8IVE0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CROCCP3Q8IVE0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
CROCCP3Q8IVE0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
CROCCP3Q8IVE0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
CROCCP3Q8IVE0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
CROCCP3Q8IVE0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CROCCP3Q8IVE0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CROCCP3Q8IVE0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CROCCP3Q8IVE0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CROCCP3Q8IVE0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CROCCP3Q8IVE0 DRD5P2-201ENST00000421395 2012 ntBASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms