Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LCA10Q71F78 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LCA10Q71F78 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LCA10Q71F78 RARA-203ENST00000394086 2008 ntTSL 2 BASIC14□□□□□ -0.17
LCA10Q71F78 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LCA10Q71F78 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LCA10Q71F78 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC14□□□□□ -0.17
LCA10Q71F78 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LCA10Q71F78 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC14□□□□□ -0.17
LCA10Q71F78 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LCA10Q71F78 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC14□□□□□ -0.17
LCA10Q71F78 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
LCA10Q71F78 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LCA10Q71F78 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LCA10Q71F78 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LCA10Q71F78 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LCA10Q71F78 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC13.99□□□□□ -0.17
LCA10Q71F78 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LCA10Q71F78 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LCA10Q71F78 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LCA10Q71F78 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LCA10Q71F78 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LCA10Q71F78 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LCA10Q71F78 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LCA10Q71F78 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LCA10Q71F78 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LCA10Q71F78 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCA10Q71F78 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LCA10Q71F78 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
LCA10Q71F78 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC13.96□□□□□ -0.17
LCA10Q71F78 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCA10Q71F78 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC13.96□□□□□ -0.17
LCA10Q71F78 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCA10Q71F78 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LCA10Q71F78 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCA10Q71F78 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LCA10Q71F78 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC13.95□□□□□ -0.18
LCA10Q71F78 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LCA10Q71F78 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCA10Q71F78 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCA10Q71F78 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCA10Q71F78 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCA10Q71F78 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCA10Q71F78 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LCA10Q71F78 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC13.95□□□□□ -0.18
LCA10Q71F78 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCA10Q71F78 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LCA10Q71F78 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCA10Q71F78 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LCA10Q71F78 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC13.94□□□□□ -0.18
LCA10Q71F78 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LCA10Q71F78 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LCA10Q71F78 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LCA10Q71F78 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCA10Q71F78 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LCA10Q71F78 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCA10Q71F78 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCA10Q71F78 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCA10Q71F78 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LCA10Q71F78 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LCA10Q71F78 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC13.92□□□□□ -0.18
LCA10Q71F78 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LCA10Q71F78 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LCA10Q71F78 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LCA10Q71F78 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LCA10Q71F78 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LCA10Q71F78 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC13.91□□□□□ -0.18
LCA10Q71F78 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LCA10Q71F78 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LCA10Q71F78 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LCA10Q71F78 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LCA10Q71F78 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LCA10Q71F78 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC13.9□□□□□ -0.18
LCA10Q71F78 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LCA10Q71F78 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
LCA10Q71F78 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LCA10Q71F78 AL121749.1-202ENST00000609313 2153 ntBASIC13.89□□□□□ -0.19
LCA10Q71F78 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LCA10Q71F78 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC13.89□□□□□ -0.19
LCA10Q71F78 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LCA10Q71F78 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LCA10Q71F78 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC13.88□□□□□ -0.19
LCA10Q71F78 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LCA10Q71F78 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LCA10Q71F78 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LCA10Q71F78 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LCA10Q71F78 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LCA10Q71F78 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LCA10Q71F78 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LCA10Q71F78 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LCA10Q71F78 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC13.86□□□□□ -0.19
LCA10Q71F78 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LCA10Q71F78 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LCA10Q71F78 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LCA10Q71F78 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LCA10Q71F78 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LCA10Q71F78 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LCA10Q71F78 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LCA10Q71F78 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LCA10Q71F78 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms