Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL54Q6P161 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL54Q6P161 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
MRPL54Q6P161 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.83■□□□□ 0.77
MRPL54Q6P161 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL54Q6P161 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL54Q6P161 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL54Q6P161 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL54Q6P161 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
MRPL54Q6P161 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL54Q6P161 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL54Q6P161 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL54Q6P161 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL54Q6P161 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL54Q6P161 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL54Q6P161 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL54Q6P161 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.79■□□□□ 0.76
MRPL54Q6P161 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MRPL54Q6P161 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.78■□□□□ 0.76
MRPL54Q6P161 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL54Q6P161 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
MRPL54Q6P161 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.77■□□□□ 0.75
MRPL54Q6P161 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL54Q6P161 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL54Q6P161 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MRPL54Q6P161 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL54Q6P161 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL54Q6P161 AC015813.7-201ENST00000623294 581 ntBASIC19.75■□□□□ 0.75
MRPL54Q6P161 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL54Q6P161 DRD5P2-201ENST00000421395 2012 ntBASIC19.75■□□□□ 0.75
MRPL54Q6P161 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL54Q6P161 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MRPL54Q6P161 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL54Q6P161 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.74■□□□□ 0.75
MRPL54Q6P161 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
MRPL54Q6P161 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.73■□□□□ 0.75
MRPL54Q6P161 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL54Q6P161 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL54Q6P161 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.72■□□□□ 0.75
MRPL54Q6P161 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MRPL54Q6P161 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL54Q6P161 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL54Q6P161 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
MRPL54Q6P161 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.72■□□□□ 0.75
MRPL54Q6P161 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MRPL54Q6P161 AL135925.1-201ENST00000605920 1701 ntBASIC19.71■□□□□ 0.75
MRPL54Q6P161 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MRPL54Q6P161 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
MRPL54Q6P161 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
MRPL54Q6P161 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPL54Q6P161 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MRPL54Q6P161 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL54Q6P161 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.69■□□□□ 0.74
MRPL54Q6P161 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL54Q6P161 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL54Q6P161 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL54Q6P161 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL54Q6P161 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL54Q6P161 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL54Q6P161 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL54Q6P161 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL54Q6P161 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL54Q6P161 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL54Q6P161 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL54Q6P161 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL54Q6P161 AL139393.2-201ENST00000608721 2025 ntBASIC19.64■□□□□ 0.73
MRPL54Q6P161 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL54Q6P161 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL54Q6P161 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL54Q6P161 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
MRPL54Q6P161 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL54Q6P161 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
MRPL54Q6P161 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL54Q6P161 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL54Q6P161 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRPL54Q6P161 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRPL54Q6P161 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MRPL54Q6P161 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRPL54Q6P161 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRPL54Q6P161 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
MRPL54Q6P161 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MRPL54Q6P161 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MRPL54Q6P161 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MRPL54Q6P161 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
MRPL54Q6P161 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MRPL54Q6P161 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.58■□□□□ 0.73
MRPL54Q6P161 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
MRPL54Q6P161 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MRPL54Q6P161 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MRPL54Q6P161 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MRPL54Q6P161 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MRPL54Q6P161 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.56■□□□□ 0.72
MRPL54Q6P161 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
MRPL54Q6P161 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MRPL54Q6P161 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MRPL54Q6P161 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.54■□□□□ 0.72
MRPL54Q6P161 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.54■□□□□ 0.72
MRPL54Q6P161 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MRPL54Q6P161 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.53■□□□□ 0.72
MRPL54Q6P161 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms