Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMIM17P0DL12 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.31■□□□□ 0.68
SMIM17P0DL12 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMIM17P0DL12 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMIM17P0DL12 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMIM17P0DL12 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.3■□□□□ 0.68
SMIM17P0DL12 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM17P0DL12 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SMIM17P0DL12 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SMIM17P0DL12 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM17P0DL12 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM17P0DL12 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM17P0DL12 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
SMIM17P0DL12 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.29■□□□□ 0.68
SMIM17P0DL12 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM17P0DL12 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM17P0DL12 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM17P0DL12 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMIM17P0DL12 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM17P0DL12 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM17P0DL12 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM17P0DL12 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.25■□□□□ 0.67
SMIM17P0DL12 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SMIM17P0DL12 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM17P0DL12 DYNLL1-208ENST00000550178 581 ntBASIC19.25■□□□□ 0.67
SMIM17P0DL12 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.25■□□□□ 0.67
SMIM17P0DL12 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMIM17P0DL12 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SMIM17P0DL12 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM17P0DL12 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM17P0DL12 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM17P0DL12 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM17P0DL12 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMIM17P0DL12 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SMIM17P0DL12 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM17P0DL12 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.22■□□□□ 0.67
SMIM17P0DL12 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMIM17P0DL12 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMIM17P0DL12 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM17P0DL12 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.2■□□□□ 0.66
SMIM17P0DL12 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM17P0DL12 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SMIM17P0DL12 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM17P0DL12 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM17P0DL12 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM17P0DL12 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM17P0DL12 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.19■□□□□ 0.66
SMIM17P0DL12 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM17P0DL12 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM17P0DL12 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM17P0DL12 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
SMIM17P0DL12 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM17P0DL12 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM17P0DL12 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM17P0DL12 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
SMIM17P0DL12 AL135925.1-201ENST00000605920 1701 ntBASIC19.18■□□□□ 0.66
SMIM17P0DL12 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.18■□□□□ 0.66
SMIM17P0DL12 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM17P0DL12 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM17P0DL12 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM17P0DL12 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM17P0DL12 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM17P0DL12 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SMIM17P0DL12 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM17P0DL12 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM17P0DL12 AC142086.6-201ENST00000621154 1765 ntBASIC19.15■□□□□ 0.66
SMIM17P0DL12 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM17P0DL12 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM17P0DL12 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM17P0DL12 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMIM17P0DL12 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.14■□□□□ 0.65
SMIM17P0DL12 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMIM17P0DL12 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM17P0DL12 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.13■□□□□ 0.65
SMIM17P0DL12 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.13■□□□□ 0.65
SMIM17P0DL12 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM17P0DL12 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM17P0DL12 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM17P0DL12 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM17P0DL12 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM17P0DL12 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM17P0DL12 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM17P0DL12 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM17P0DL12 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM17P0DL12 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM17P0DL12 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM17P0DL12 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM17P0DL12 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM17P0DL12 AL031258.1-201ENST00000623562 325 ntBASIC19.09■□□□□ 0.65
SMIM17P0DL12 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM17P0DL12 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SMIM17P0DL12 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM17P0DL12 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMIM17P0DL12 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SMIM17P0DL12 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.08■□□□□ 0.64
SMIM17P0DL12 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM17P0DL12 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM17P0DL12 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM17P0DL12 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMIM17P0DL12 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms