Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GAPDHP04406 AC136428.2-201ENST00000563187 214 ntBASIC21.8■■□□□ 1.08
GAPDHP04406 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.8■■□□□ 1.08
GAPDHP04406 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GAPDHP04406 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GAPDHP04406 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GAPDHP04406 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GAPDHP04406 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GAPDHP04406 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.78■■□□□ 1.08
GAPDHP04406 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GAPDHP04406 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.77■■□□□ 1.08
GAPDHP04406 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.77■■□□□ 1.08
GAPDHP04406 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.76■■□□□ 1.07
GAPDHP04406 AL391121.1-201ENST00000607967 1349 ntBASIC21.76■■□□□ 1.07
GAPDHP04406 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GAPDHP04406 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GAPDHP04406 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
GAPDHP04406 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.75■■□□□ 1.07
GAPDHP04406 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GAPDHP04406 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GAPDHP04406 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.74■■□□□ 1.07
GAPDHP04406 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.74■■□□□ 1.07
GAPDHP04406 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GAPDHP04406 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GAPDHP04406 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.74■■□□□ 1.07
GAPDHP04406 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GAPDHP04406 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GAPDHP04406 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GAPDHP04406 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GAPDHP04406 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.72■■□□□ 1.07
GAPDHP04406 CAHM-201ENST00000604200 896 ntBASIC21.72■■□□□ 1.07
GAPDHP04406 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GAPDHP04406 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GAPDHP04406 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
GAPDHP04406 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GAPDHP04406 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.71■■□□□ 1.07
GAPDHP04406 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GAPDHP04406 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAPDHP04406 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
GAPDHP04406 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GAPDHP04406 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
GAPDHP04406 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GAPDHP04406 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
GAPDHP04406 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAPDHP04406 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.69■■□□□ 1.06
GAPDHP04406 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GAPDHP04406 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.68■■□□□ 1.06
GAPDHP04406 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAPDHP04406 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GAPDHP04406 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GAPDHP04406 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
GAPDHP04406 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GAPDHP04406 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.66■■□□□ 1.06
GAPDHP04406 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GAPDHP04406 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GAPDHP04406 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GAPDHP04406 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.65■■□□□ 1.06
GAPDHP04406 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.65■■□□□ 1.06
GAPDHP04406 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GAPDHP04406 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
GAPDHP04406 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GAPDHP04406 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GAPDHP04406 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
GAPDHP04406 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GAPDHP04406 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
GAPDHP04406 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.63■■□□□ 1.05
GAPDHP04406 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
GAPDHP04406 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GAPDHP04406 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GAPDHP04406 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GAPDHP04406 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GAPDHP04406 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
GAPDHP04406 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GAPDHP04406 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GAPDHP04406 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GAPDHP04406 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GAPDHP04406 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.61■■□□□ 1.05
GAPDHP04406 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GAPDHP04406 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GAPDHP04406 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GAPDHP04406 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.6■■□□□ 1.05
GAPDHP04406 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GAPDHP04406 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.6■■□□□ 1.05
GAPDHP04406 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GAPDHP04406 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GAPDHP04406 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GAPDHP04406 AC135731.1-201ENST00000569415 2548 ntBASIC21.59■■□□□ 1.05
GAPDHP04406 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GAPDHP04406 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GAPDHP04406 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
GAPDHP04406 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GAPDHP04406 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GAPDHP04406 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GAPDHP04406 AL121749.1-202ENST00000609313 2153 ntBASIC21.57■■□□□ 1.04
GAPDHP04406 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
GAPDHP04406 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.56■■□□□ 1.04
GAPDHP04406 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GAPDHP04406 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GAPDHP04406 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GAPDHP04406 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms