Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
NDUFA3O95167 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.99■□□□□ 0.95
NDUFA3O95167 AP006261.1-201ENST00000584783 668 ntBASIC20.99■□□□□ 0.95
NDUFA3O95167 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NDUFA3O95167 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFA3O95167 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFA3O95167 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFA3O95167 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFA3O95167 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFA3O95167 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFA3O95167 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFA3O95167 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
NDUFA3O95167 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFA3O95167 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.96■□□□□ 0.95
NDUFA3O95167 MIR3665-201ENST00000578708 105 ntBASIC20.96■□□□□ 0.95
NDUFA3O95167 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
NDUFA3O95167 DUX4L28-201ENST00000623687 678 ntBASIC20.95■□□□□ 0.94
NDUFA3O95167 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFA3O95167 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFA3O95167 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFA3O95167 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFA3O95167 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFA3O95167 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
NDUFA3O95167 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFA3O95167 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NDUFA3O95167 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFA3O95167 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFA3O95167 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NDUFA3O95167 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFA3O95167 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.92■□□□□ 0.94
NDUFA3O95167 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFA3O95167 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFA3O95167 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFA3O95167 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDUFA3O95167 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDUFA3O95167 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.91■□□□□ 0.94
NDUFA3O95167 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.91■□□□□ 0.94
NDUFA3O95167 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFA3O95167 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.9■□□□□ 0.94
NDUFA3O95167 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.9■□□□□ 0.94
NDUFA3O95167 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFA3O95167 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NDUFA3O95167 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NDUFA3O95167 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFA3O95167 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.89■□□□□ 0.93
NDUFA3O95167 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFA3O95167 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFA3O95167 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFA3O95167 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFA3O95167 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFA3O95167 AL162393.1-201ENST00000437852 946 ntBASIC20.88■□□□□ 0.93
NDUFA3O95167 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFA3O95167 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.87■□□□□ 0.93
NDUFA3O95167 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NDUFA3O95167 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFA3O95167 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFA3O95167 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFA3O95167 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
NDUFA3O95167 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
NDUFA3O95167 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.84■□□□□ 0.93
NDUFA3O95167 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.84■□□□□ 0.93
NDUFA3O95167 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.84■□□□□ 0.93
NDUFA3O95167 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFA3O95167 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.84■□□□□ 0.93
NDUFA3O95167 ABCB10P3-201ENST00000561950 2166 ntBASIC20.84■□□□□ 0.93
NDUFA3O95167 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFA3O95167 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NDUFA3O95167 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NDUFA3O95167 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDUFA3O95167 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.82■□□□□ 0.92
NDUFA3O95167 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDUFA3O95167 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.81■□□□□ 0.92
NDUFA3O95167 AC087741.3-201ENST00000624270 1347 ntBASIC20.81■□□□□ 0.92
NDUFA3O95167 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDUFA3O95167 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDUFA3O95167 AC108673.1-201ENST00000510422 1159 ntBASIC20.81■□□□□ 0.92
NDUFA3O95167 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDUFA3O95167 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.8■□□□□ 0.92
NDUFA3O95167 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NDUFA3O95167 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDUFA3O95167 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDUFA3O95167 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NDUFA3O95167 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDUFA3O95167 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NDUFA3O95167 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NDUFA3O95167 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NDUFA3O95167 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NDUFA3O95167 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDUFA3O95167 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NDUFA3O95167 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.76■□□□□ 0.91
NDUFA3O95167 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFA3O95167 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDUFA3O95167 AC127502.1-201ENST00000399971 1502 ntBASIC20.75■□□□□ 0.91
NDUFA3O95167 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA3O95167 AC044849.2-201ENST00000606596 710 ntBASIC20.75■□□□□ 0.91
NDUFA3O95167 MIR6090-201ENST00000622481 60 ntBASIC20.75■□□□□ 0.91
NDUFA3O95167 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA3O95167 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA3O95167 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDUFA3O95167 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms