Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC35.79■■■■□ 3.32
LTN1O94822 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
LTN1O94822 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
LTN1O94822 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
LTN1O94822 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
LTN1O94822 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
LTN1O94822 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC35.75■■■■□ 3.31
LTN1O94822 CALM3-209ENST00000597743 577 ntTSL 4 BASIC35.74■■■■□ 3.31
LTN1O94822 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC35.74■■■■□ 3.31
LTN1O94822 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC35.73■■■■□ 3.31
LTN1O94822 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
LTN1O94822 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
LTN1O94822 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC35.71■■■■□ 3.31
LTN1O94822 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC35.69■■■■□ 3.3
LTN1O94822 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC35.69■■■■□ 3.3
LTN1O94822 HSD17B1P1-201ENST00000590052 955 ntBASIC35.69■■■■□ 3.3
LTN1O94822 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
LTN1O94822 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC35.66■■■■□ 3.3
LTN1O94822 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
LTN1O94822 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC35.66■■■■□ 3.3
LTN1O94822 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
LTN1O94822 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC35.65■■■■□ 3.3
LTN1O94822 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC35.65■■■■□ 3.3
LTN1O94822 EI24-212ENST00000615917 1407 ntTSL 2 BASIC35.64■■■■□ 3.3
LTN1O94822 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
LTN1O94822 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC35.63■■■■□ 3.29
LTN1O94822 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC35.63■■■■□ 3.29
LTN1O94822 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC35.62■■■■□ 3.29
LTN1O94822 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC35.62■■■■□ 3.29
LTN1O94822 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC35.61■■■■□ 3.29
LTN1O94822 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
LTN1O94822 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L13-201ENST00000554103 1267 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L15-201ENST00000611059 1267 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L23-201ENST00000615195 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L24-201ENST00000617576 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L22-201ENST00000618238 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L20-201ENST00000619712 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L21-201ENST00000622058 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L10-201ENST00000622460 1267 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L25-201ENST00000624915 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC35.59■■■■□ 3.29
LTN1O94822 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
LTN1O94822 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
LTN1O94822 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC35.58■■■■□ 3.29
LTN1O94822 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC35.56■■■■□ 3.28
LTN1O94822 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
LTN1O94822 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
LTN1O94822 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
LTN1O94822 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
LTN1O94822 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC35.55■■■■□ 3.28
LTN1O94822 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
LTN1O94822 AL161658.1-201ENST00000623641 1967 ntBASIC35.53■■■■□ 3.28
LTN1O94822 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
LTN1O94822 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC35.52■■■■□ 3.28
LTN1O94822 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC35.52■■■■□ 3.28
LTN1O94822 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
LTN1O94822 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
LTN1O94822 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC35.51■■■■□ 3.27
LTN1O94822 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
LTN1O94822 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC35.5■■■■□ 3.27
LTN1O94822 BRD4-212ENST00000630599 726 ntTSL 2 BASIC35.5■■■■□ 3.27
LTN1O94822 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC35.49■■■■□ 3.27
LTN1O94822 METRNL-202ENST00000570778 967 ntTSL 5 BASIC35.49■■■■□ 3.27
LTN1O94822 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC35.48■■■■□ 3.27
LTN1O94822 LINC00273-201ENST00000539813 1452 ntBASIC35.47■■■■□ 3.27
LTN1O94822 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
LTN1O94822 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC35.46■■■■□ 3.27
LTN1O94822 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
LTN1O94822 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC35.46■■■■□ 3.27
LTN1O94822 CHML-204ENST00000638121 920 ntTSL 2 BASIC35.45■■■■□ 3.27
LTN1O94822 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
LTN1O94822 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC35.44■■■■□ 3.26
LTN1O94822 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC35.42■■■■□ 3.26
LTN1O94822 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
LTN1O94822 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
LTN1O94822 AC010864.1-201ENST00000609407 1511 ntBASIC35.4■■■■□ 3.26
LTN1O94822 HES6-205ENST00000409356 528 ntTSL 2 BASIC35.38■■■■□ 3.25
LTN1O94822 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC35.38■■■■□ 3.25
LTN1O94822 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
LTN1O94822 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
LTN1O94822 ABHD17AP3-201ENST00000503096 1137 ntBASIC35.38■■■■□ 3.25
LTN1O94822 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC35.37■■■■□ 3.25
LTN1O94822 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
LTN1O94822 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC35.35■■■■□ 3.25
LTN1O94822 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC35.34■■■■□ 3.25
LTN1O94822 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
LTN1O94822 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
LTN1O94822 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
LTN1O94822 SRP68-213ENST00000629930 165 ntTSL 5 BASIC35.32■■■■□ 3.24
LTN1O94822 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
LTN1O94822 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC35.31■■■■□ 3.24
LTN1O94822 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC35.31■■■■□ 3.24
LTN1O94822 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
LTN1O94822 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC35.3■■■■□ 3.24
LTN1O94822 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC35.29■■■■□ 3.24
LTN1O94822 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
LTN1O94822 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
LTN1O94822 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC35.29■■■■□ 3.24
LTN1O94822 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms