Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PRDM1O75626 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
PRDM1O75626 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PRDM1O75626 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.25■■■□□ 2.59
PRDM1O75626 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.24■■■□□ 2.59
PRDM1O75626 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
PRDM1O75626 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PRDM1O75626 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.23■■■□□ 2.59
PRDM1O75626 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.23■■■□□ 2.59
PRDM1O75626 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.23■■■□□ 2.59
PRDM1O75626 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.22■■■□□ 2.59
PRDM1O75626 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.21■■■□□ 2.59
PRDM1O75626 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.21■■■□□ 2.59
PRDM1O75626 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PRDM1O75626 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
PRDM1O75626 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.19■■■□□ 2.58
PRDM1O75626 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.19■■■□□ 2.58
PRDM1O75626 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PRDM1O75626 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.18■■■□□ 2.58
PRDM1O75626 AC021231.2-201ENST00000594613 730 ntBASIC31.18■■■□□ 2.58
PRDM1O75626 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PRDM1O75626 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PRDM1O75626 AC010864.1-201ENST00000609407 1511 ntBASIC31.18■■■□□ 2.58
PRDM1O75626 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.17■■■□□ 2.58
PRDM1O75626 DUX4L29-201ENST00000425409 679 ntBASIC31.16■■■□□ 2.58
PRDM1O75626 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PRDM1O75626 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.15■■■□□ 2.58
PRDM1O75626 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.57
PRDM1O75626 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PRDM1O75626 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.12■■■□□ 2.57
PRDM1O75626 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PRDM1O75626 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.11■■■□□ 2.57
PRDM1O75626 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PRDM1O75626 AL135925.1-201ENST00000605920 1701 ntBASIC31.11■■■□□ 2.57
PRDM1O75626 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PRDM1O75626 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PRDM1O75626 ZNRF2P2-203ENST00000454624 420 ntBASIC31.1■■■□□ 2.57
PRDM1O75626 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PRDM1O75626 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.09■■■□□ 2.57
PRDM1O75626 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.09■■■□□ 2.57
PRDM1O75626 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PRDM1O75626 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PRDM1O75626 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PRDM1O75626 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PRDM1O75626 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PRDM1O75626 MIR7108-201ENST00000614319 87 ntBASIC31.08■■■□□ 2.57
PRDM1O75626 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.06■■■□□ 2.56
PRDM1O75626 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
PRDM1O75626 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.05■■■□□ 2.56
PRDM1O75626 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PRDM1O75626 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
PRDM1O75626 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PRDM1O75626 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.02■■■□□ 2.56
PRDM1O75626 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
PRDM1O75626 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PRDM1O75626 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PRDM1O75626 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31■■■□□ 2.55
PRDM1O75626 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.99■■■□□ 2.55
PRDM1O75626 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
PRDM1O75626 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.99■■■□□ 2.55
PRDM1O75626 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
PRDM1O75626 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
PRDM1O75626 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.98■■■□□ 2.55
PRDM1O75626 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
PRDM1O75626 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
PRDM1O75626 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
PRDM1O75626 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PRDM1O75626 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.54
PRDM1O75626 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
PRDM1O75626 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
PRDM1O75626 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
PRDM1O75626 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
PRDM1O75626 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PRDM1O75626 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PRDM1O75626 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PRDM1O75626 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PRDM1O75626 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
PRDM1O75626 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
PRDM1O75626 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.91■■■□□ 2.54
PRDM1O75626 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.91■■■□□ 2.54
PRDM1O75626 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.9■■■□□ 2.54
PRDM1O75626 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PRDM1O75626 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PRDM1O75626 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PRDM1O75626 ST7-AS1-201ENST00000456775 1889 ntBASIC30.89■■■□□ 2.54
PRDM1O75626 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
PRDM1O75626 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
PRDM1O75626 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PRDM1O75626 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PRDM1O75626 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PRDM1O75626 AC127502.1-201ENST00000399971 1502 ntBASIC30.85■■■□□ 2.53
PRDM1O75626 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PRDM1O75626 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PRDM1O75626 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.84■■■□□ 2.53
PRDM1O75626 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PRDM1O75626 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
PRDM1O75626 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
PRDM1O75626 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
PRDM1O75626 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.82■■■□□ 2.52
PRDM1O75626 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.82■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 356.5 ms