Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDUFA1O15239 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDUFA1O15239 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.85■□□□□ 0.45
NDUFA1O15239 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDUFA1O15239 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
NDUFA1O15239 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDUFA1O15239 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDUFA1O15239 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDUFA1O15239 AL121749.1-202ENST00000609313 2153 ntBASIC17.84■□□□□ 0.45
NDUFA1O15239 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NDUFA1O15239 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NDUFA1O15239 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NDUFA1O15239 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.83■□□□□ 0.44
NDUFA1O15239 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NDUFA1O15239 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NDUFA1O15239 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NDUFA1O15239 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NDUFA1O15239 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA1O15239 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA1O15239 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA1O15239 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NDUFA1O15239 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NDUFA1O15239 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA1O15239 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA1O15239 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA1O15239 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
NDUFA1O15239 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA1O15239 DRD5P2-201ENST00000421395 2012 ntBASIC17.78■□□□□ 0.44
NDUFA1O15239 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA1O15239 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA1O15239 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA1O15239 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFA1O15239 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFA1O15239 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA1O15239 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NDUFA1O15239 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFA1O15239 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.75■□□□□ 0.43
NDUFA1O15239 AL139393.2-201ENST00000608721 2025 ntBASIC17.75■□□□□ 0.43
NDUFA1O15239 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
NDUFA1O15239 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NDUFA1O15239 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.74■□□□□ 0.43
NDUFA1O15239 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDUFA1O15239 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NDUFA1O15239 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA1O15239 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA1O15239 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA1O15239 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC17.73■□□□□ 0.43
NDUFA1O15239 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA1O15239 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA1O15239 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA1O15239 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA1O15239 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA1O15239 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NDUFA1O15239 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NDUFA1O15239 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFA1O15239 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NDUFA1O15239 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.71■□□□□ 0.43
NDUFA1O15239 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NDUFA1O15239 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
NDUFA1O15239 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA1O15239 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA1O15239 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA1O15239 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA1O15239 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA1O15239 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA1O15239 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA1O15239 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA1O15239 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA1O15239 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA1O15239 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA1O15239 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NDUFA1O15239 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA1O15239 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.68■□□□□ 0.42
NDUFA1O15239 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.68■□□□□ 0.42
NDUFA1O15239 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA1O15239 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
NDUFA1O15239 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA1O15239 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.67■□□□□ 0.42
NDUFA1O15239 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA1O15239 AC135731.1-201ENST00000569415 2548 ntBASIC17.66■□□□□ 0.42
NDUFA1O15239 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA1O15239 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA1O15239 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFA1O15239 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA1O15239 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA1O15239 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA1O15239 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA1O15239 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.64■□□□□ 0.42
NDUFA1O15239 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.64■□□□□ 0.41
NDUFA1O15239 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.64■□□□□ 0.41
NDUFA1O15239 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.64■□□□□ 0.41
NDUFA1O15239 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NDUFA1O15239 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFA1O15239 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms