Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
COLCA2A8K830 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.69■□□□□ 0.9
COLCA2A8K830 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
COLCA2A8K830 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COLCA2A8K830 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.69■□□□□ 0.9
COLCA2A8K830 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.68■□□□□ 0.9
COLCA2A8K830 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COLCA2A8K830 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.67■□□□□ 0.9
COLCA2A8K830 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COLCA2A8K830 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COLCA2A8K830 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
COLCA2A8K830 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COLCA2A8K830 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COLCA2A8K830 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COLCA2A8K830 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.65■□□□□ 0.9
COLCA2A8K830 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COLCA2A8K830 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COLCA2A8K830 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COLCA2A8K830 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COLCA2A8K830 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COLCA2A8K830 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COLCA2A8K830 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COLCA2A8K830 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COLCA2A8K830 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COLCA2A8K830 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.62■□□□□ 0.89
COLCA2A8K830 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COLCA2A8K830 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
COLCA2A8K830 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.61■□□□□ 0.89
COLCA2A8K830 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.6■□□□□ 0.89
COLCA2A8K830 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COLCA2A8K830 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COLCA2A8K830 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COLCA2A8K830 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COLCA2A8K830 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.58■□□□□ 0.89
COLCA2A8K830 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
COLCA2A8K830 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COLCA2A8K830 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.58■□□□□ 0.88
COLCA2A8K830 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.58■□□□□ 0.88
COLCA2A8K830 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COLCA2A8K830 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COLCA2A8K830 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COLCA2A8K830 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COLCA2A8K830 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COLCA2A8K830 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
COLCA2A8K830 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COLCA2A8K830 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COLCA2A8K830 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.54■□□□□ 0.88
COLCA2A8K830 AC093323.1-202ENST00000635031 2045 ntBASIC20.54■□□□□ 0.88
COLCA2A8K830 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COLCA2A8K830 DRD5P2-201ENST00000421395 2012 ntBASIC20.54■□□□□ 0.88
COLCA2A8K830 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.53■□□□□ 0.88
COLCA2A8K830 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.52■□□□□ 0.88
COLCA2A8K830 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COLCA2A8K830 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
COLCA2A8K830 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.51■□□□□ 0.87
COLCA2A8K830 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.5■□□□□ 0.87
COLCA2A8K830 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COLCA2A8K830 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COLCA2A8K830 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COLCA2A8K830 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
COLCA2A8K830 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COLCA2A8K830 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COLCA2A8K830 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.49■□□□□ 0.87
COLCA2A8K830 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COLCA2A8K830 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COLCA2A8K830 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COLCA2A8K830 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COLCA2A8K830 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.48■□□□□ 0.87
COLCA2A8K830 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COLCA2A8K830 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COLCA2A8K830 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COLCA2A8K830 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COLCA2A8K830 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
COLCA2A8K830 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
COLCA2A8K830 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COLCA2A8K830 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COLCA2A8K830 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COLCA2A8K830 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COLCA2A8K830 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
COLCA2A8K830 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COLCA2A8K830 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COLCA2A8K830 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.41■□□□□ 0.86
COLCA2A8K830 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLCA2A8K830 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLCA2A8K830 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLCA2A8K830 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COLCA2A8K830 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
COLCA2A8K830 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COLCA2A8K830 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COLCA2A8K830 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.39■□□□□ 0.86
COLCA2A8K830 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COLCA2A8K830 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.39■□□□□ 0.86
COLCA2A8K830 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
COLCA2A8K830 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COLCA2A8K830 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
COLCA2A8K830 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COLCA2A8K830 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COLCA2A8K830 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
COLCA2A8K830 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COLCA2A8K830 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms