Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV22A0A0B4J277 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV22A0A0B4J277 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAV22A0A0B4J277 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV22A0A0B4J277 ST7-AS1-201ENST00000456775 1889 ntBASIC14.93□□□□□ -0.02
TRAV22A0A0B4J277 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV22A0A0B4J277 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAV22A0A0B4J277 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV22A0A0B4J277 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV22A0A0B4J277 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV22A0A0B4J277 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV22A0A0B4J277 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV22A0A0B4J277 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV22A0A0B4J277 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV22A0A0B4J277 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV22A0A0B4J277 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV22A0A0B4J277 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV22A0A0B4J277 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV22A0A0B4J277 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV22A0A0B4J277 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV22A0A0B4J277 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV22A0A0B4J277 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV22A0A0B4J277 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV22A0A0B4J277 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV22A0A0B4J277 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV22A0A0B4J277 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV22A0A0B4J277 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TRAV22A0A0B4J277 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 PKM-203ENST00000389093 2279 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV22A0A0B4J277 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAV22A0A0B4J277 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV22A0A0B4J277 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAV22A0A0B4J277 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV22A0A0B4J277 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV22A0A0B4J277 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV22A0A0B4J277 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV22A0A0B4J277 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV22A0A0B4J277 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAV22A0A0B4J277 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV22A0A0B4J277 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV22A0A0B4J277 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV22A0A0B4J277 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV22A0A0B4J277 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV22A0A0B4J277 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV22A0A0B4J277 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV22A0A0B4J277 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV22A0A0B4J277 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV22A0A0B4J277 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV22A0A0B4J277 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV22A0A0B4J277 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV22A0A0B4J277 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV22A0A0B4J277 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV22A0A0B4J277 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV22A0A0B4J277 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV22A0A0B4J277 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV22A0A0B4J277 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV22A0A0B4J277 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV22A0A0B4J277 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV22A0A0B4J277 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV22A0A0B4J277 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV22A0A0B4J277 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV22A0A0B4J277 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV22A0A0B4J277 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV22A0A0B4J277 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAV22A0A0B4J277 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV22A0A0B4J277 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV22A0A0B4J277 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV22A0A0B4J277 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV22A0A0B4J277 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV22A0A0B4J277 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV22A0A0B4J277 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV22A0A0B4J277 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV22A0A0B4J277 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV22A0A0B4J277 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV22A0A0B4J277 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV22A0A0B4J277 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV22A0A0B4J277 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV22A0A0B4J277 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV22A0A0B4J277 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV22A0A0B4J277 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV22A0A0B4J277 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV22A0A0B4J277 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV22A0A0B4J277 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV22A0A0B4J277 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV22A0A0B4J277 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV22A0A0B4J277 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV22A0A0B4J277 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV22A0A0B4J277 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV22A0A0B4J277 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV22A0A0B4J277 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAV22A0A0B4J277 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms