Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 CDC15YAR019C 2925 nt4.74□□□□□ -1.65
NUP42P49686 YMR102CYMR102C 2505 nt4.74□□□□□ -1.65
NUP42P49686 PGK1YCR012W 1251 nt4.74□□□□□ -1.65
NUP42P49686 SCW11YGL028C 1629 nt4.74□□□□□ -1.65
NUP42P49686 DOT1YDR440W 1749 nt4.74□□□□□ -1.65
NUP42P49686 IZH3YLR023C 1632 nt4.73□□□□□ -1.65
NUP42P49686 SPC19YDR201W 498 nt4.73□□□□□ -1.65
NUP42P49686 RPS18BYML026C 441 nt4.73□□□□□ -1.65
NUP42P49686 NHP6AYPR052C 282 nt4.73□□□□□ -1.65
NUP42P49686 YPR053CYPR053C 456 nt4.73□□□□□ -1.65
NUP42P49686 YBR197CYBR197C 654 nt4.73□□□□□ -1.65
NUP42P49686 RET1YOR207C 3450 nt4.73□□□□□ -1.65
NUP42P49686 IOC3YFR013W 2364 nt4.72□□□□□ -1.65
NUP42P49686 LEU3YLR451W 2661 nt4.72□□□□□ -1.65
NUP42P49686 VPS52YDR484W 1926 nt4.72□□□□□ -1.65
NUP42P49686 GPG1YGL121C 381 nt4.71□□□□□ -1.66
NUP42P49686 POG1YIL122W 1056 nt4.71□□□□□ -1.66
NUP42P49686 FUI1YBL042C 1920 nt4.71□□□□□ -1.66
NUP42P49686 VIK1YPL253C 1944 nt4.71□□□□□ -1.66
NUP42P49686 GYL1YMR192W 2163 nt4.7□□□□□ -1.66
NUP42P49686 YDL085C-AYDL085C-A 207 nt4.7□□□□□ -1.66
NUP42P49686 YDR246W-AYDR246W-A 201 nt4.7□□□□□ -1.66
NUP42P49686 YIL058WYIL058W 285 nt4.7□□□□□ -1.66
NUP42P49686 SWD3YBR175W 948 nt4.7□□□□□ -1.66
NUP42P49686 ATP25YMR098C 1839 nt4.69□□□□□ -1.66
NUP42P49686 ARG2YJL071W 1725 nt4.69□□□□□ -1.66
NUP42P49686 BFA1YJR053W 1725 nt4.69□□□□□ -1.66
NUP42P49686 MDR1YGR100W 2853 nt4.69□□□□□ -1.66
NUP42P49686 YEL014CYEL014C 306 nt4.69□□□□□ -1.66
NUP42P49686 HPA3YEL066W 540 nt4.69□□□□□ -1.66
NUP42P49686 LSM1YJL124C 519 nt4.69□□□□□ -1.66
NUP42P49686 NPR2YEL062W 1848 nt4.69□□□□□ -1.66
NUP42P49686 TIF4632YGL049C 2745 nt4.68□□□□□ -1.66
NUP42P49686 SSB1YDL229W 1842 nt4.68□□□□□ -1.66
NUP42P49686 SSB2YNL209W 1842 nt4.68□□□□□ -1.66
NUP42P49686 YHR213W-BYHR213W-B 300 nt4.68□□□□□ -1.66
NUP42P49686 NCE101YJL205C 162 nt4.68□□□□□ -1.66
NUP42P49686 YAR064WYAR064W 300 nt4.68□□□□□ -1.66
NUP42P49686 YOL046CYOL046C 675 nt4.68□□□□□ -1.66
NUP42P49686 CDH1YGL003C 1701 nt4.68□□□□□ -1.66
NUP42P49686 CIN1YOR349W 3045 nt4.68□□□□□ -1.66
NUP42P49686 YPK1YKL126W 2043 nt4.68□□□□□ -1.66
NUP42P49686 PWP2YCR057C 2772 nt4.68□□□□□ -1.66
NUP42P49686 YDL041WYDL041W 354 nt4.67□□□□□ -1.66
NUP42P49686 YLR053CYLR053C 327 nt4.67□□□□□ -1.66
NUP42P49686 CCW14YLR390W-A 717 nt4.67□□□□□ -1.66
NUP42P49686 YMR141W-AYMR141W-A 225 nt4.67□□□□□ -1.66
NUP42P49686 YPR076WYPR076W 375 nt4.67□□□□□ -1.66
NUP42P49686 HIR1YBL008W 2523 nt4.67□□□□□ -1.66
NUP42P49686 NUP82YJL061W 2142 nt4.66□□□□□ -1.66
NUP42P49686 BIT61YJL058C 1632 nt4.66□□□□□ -1.66
NUP42P49686 TIM13YGR181W 318 nt4.66□□□□□ -1.66
NUP42P49686 YJL150WYJL150W 303 nt4.66□□□□□ -1.66
NUP42P49686 LCL2YLR104W 396 nt4.66□□□□□ -1.66
NUP42P49686 VHS3YOR054C 2025 nt4.66□□□□□ -1.66
NUP42P49686 SHQ1YIL104C 1524 nt4.66□□□□□ -1.66
NUP42P49686 SIP3YNL257C 3690 nt4.66□□□□□ -1.66
NUP42P49686 GYP7YDL234C 2241 nt4.65□□□□□ -1.66
NUP42P49686 YDR230WYDR230W 348 nt4.65□□□□□ -1.67
NUP42P49686 YER088C-AYER088C-A 324 nt4.65□□□□□ -1.67
NUP42P49686 RPL32YBL092W 393 nt4.65□□□□□ -1.67
NUP42P49686 NPR1YNL183C 2373 nt4.65□□□□□ -1.67
NUP42P49686 HOT1YMR172W 2160 nt4.65□□□□□ -1.67
NUP42P49686 KIP3YGL216W 2418 nt4.65□□□□□ -1.67
NUP42P49686 ECM5YMR176W 4236 nt4.65□□□□□ -1.67
NUP42P49686 YLL032CYLL032C 2478 nt4.65□□□□□ -1.67
NUP42P49686 MNT3YIL014W 1893 nt4.64□□□□□ -1.67
NUP42P49686 PRP39YML046W 1890 nt4.64□□□□□ -1.67
NUP42P49686 MNN4YKL201C 3537 nt4.64□□□□□ -1.67
NUP42P49686 GAD1YMR250W 1758 nt4.64□□□□□ -1.67
NUP42P49686 YHL006W-AYHL006W-A 354 nt4.64□□□□□ -1.67
NUP42P49686 SNZ2YNL333W 897 nt4.64□□□□□ -1.67
NUP42P49686 RPS23BYPR132W 438 nt4.64□□□□□ -1.67
NUP42P49686 TMA108YIL137C 2841 nt4.64□□□□□ -1.67
NUP42P49686 YCG1YDR325W 3108 nt4.63□□□□□ -1.67
NUP42P49686 HMG1YML075C 3165 nt4.63□□□□□ -1.67
NUP42P49686 STN1YDR082W 1485 nt4.63□□□□□ -1.67
NUP42P49686 YNL034WYNL034W 1839 nt4.63□□□□□ -1.67
NUP42P49686 RSC1YGR056W 2787 nt4.63□□□□□ -1.67
NUP42P49686 APL4YPR029C 2499 nt4.63□□□□□ -1.67
NUP42P49686 snR79snR79 84 nt4.63□□□□□ -1.67
NUP42P49686 YEL077CYEL077C 3834 nt4.63□□□□□ -1.67
NUP42P49686 SHH3YMR118C 591 nt4.63□□□□□ -1.67
NUP42P49686 CYB5YNL111C 363 nt4.63□□□□□ -1.67
NUP42P49686 YOR302WYOR302W 78 nt4.63□□□□□ -1.67
NUP42P49686 ATP15YPL271W 189 nt4.63□□□□□ -1.67
NUP42P49686 ZDS1YMR273C 2748 nt4.62□□□□□ -1.67
NUP42P49686 YMR172C-AYMR172C-A 384 nt4.62□□□□□ -1.67
NUP42P49686 AAD15YOL165C 432 nt4.62□□□□□ -1.67
NUP42P49686 ETP1YHL010C 1758 nt4.61□□□□□ -1.67
NUP42P49686 VMA3YEL027W 483 nt4.61□□□□□ -1.67
NUP42P49686 PAU2YEL049W 363 nt4.61□□□□□ -1.67
NUP42P49686 RPL34AYER056C-A 366 nt4.61□□□□□ -1.67
NUP42P49686 YER189WYER189W 369 nt4.61□□□□□ -1.67
NUP42P49686 VPS55YJR044C 423 nt4.61□□□□□ -1.67
NUP42P49686 TFB1YDR311W 1929 nt4.61□□□□□ -1.67
NUP42P49686 CLF1YLR117C 2064 nt4.61□□□□□ -1.67
NUP42P49686 CHS3YBR023C 3498 nt4.6□□□□□ -1.67
NUP42P49686 AMD1YML035C 2433 nt4.6□□□□□ -1.67
NUP42P49686 BRO1YPL084W 2535 nt4.6□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms