RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeastyeast

Gene VMA3, Length 483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA3YEL027W MON2P48563 1636 aaPredicted RBP13□□□□□ -0.33
VMA3YEL027W INO80P53115 1489 aa12.97□□□□□ -0.33
VMA3YEL027W TCB3Q03640 1545 aaKnown RBP12.47□□□□□ -0.41
VMA3YEL027W SWR1Q05471 1514 aa12.43□□□□□ -0.42
VMA3YEL027W TY1B-DR4Q07793 1604 aa12.38□□□□□ -0.43
VMA3YEL027W DNA2P38859 1522 aa12.37□□□□□ -0.43
VMA3YEL027W SGS1P35187 1447 aa12.37□□□□□ -0.43
VMA3YEL027W KOG1P38873 1557 aa12.23□□□□□ -0.45
VMA3YEL027W HSL1P34244 1518 aa11.99□□□□□ -0.49
VMA3YEL027W SPT6P23615 1451 aaKnown RBP11.98□□□□□ -0.49
VMA3YEL027W SPA2P23201 1466 aaKnown RBP11.89□□□□□ -0.51
VMA3YEL027W RSE1Q04693 1361 aaKnown RBP11.85□□□□□ -0.51
VMA3YEL027W HIR3P47171 1648 aa11.74□□□□□ -0.53
VMA3YEL027W ECM5Q03214 1411 aa11.67□□□□□ -0.54
VMA3YEL027W BUD4P47136 1447 aa11.61□□□□□ -0.55
VMA3YEL027W THO2P53552 1597 aaKnown RBP11.61□□□□□ -0.55
VMA3YEL027W XRN1P22147 1528 aaKnown RBP11.55□□□□□ -0.56
VMA3YEL027W MDS3P53094 1487 aa11.47□□□□□ -0.57
VMA3YEL027W SSN2P38931 1420 aa11.44□□□□□ -0.58
VMA3YEL027W PEP1P32319 1579 aa11.37□□□□□ -0.59
VMA3YEL027W REV3P14284 1504 aa11.35□□□□□ -0.59
VMA3YEL027W MTC1P47018 478 aaKnown RBP11.33□□□□□ -0.6
VMA3YEL027W ATG2P53855 1592 aa11.33□□□□□ -0.6
VMA3YEL027W SIN3P22579 1536 aa11.22□□□□□ -0.61
VMA3YEL027W TAF2P23255 1407 aa11.21□□□□□ -0.61
VMA3YEL027W SKI3P17883 1432 aaKnown RBP11.18□□□□□ -0.62
VMA3YEL027W BPT1P14772 1559 aa11.16□□□□□ -0.62
VMA3YEL027W SSK2P53599 1579 aa11.12□□□□□ -0.63
VMA3YEL027W DRS1P32892 752 aaKnown RBP11.09□□□□□ -0.63
VMA3YEL027W ESP1Q03018 1630 aa11.06□□□□□ -0.64
VMA3YEL027W YCF1P39109 1515 aaKnown RBP10.98□□□□□ -0.65
VMA3YEL027W UFD4P33202 1483 aa10.96□□□□□ -0.65
VMA3YEL027W MYO2P19524 1574 aaKnown RBP10.94□□□□□ -0.66
VMA3YEL027W YPK9Q12697 1472 aa10.93□□□□□ -0.66
VMA3YEL027W SCC2Q04002 1493 aa10.91□□□□□ -0.66
VMA3YEL027W RPO31P04051 1460 aa10.86□□□□□ -0.67
VMA3YEL027W CHD1P32657 1468 aa10.77□□□□□ -0.69
VMA3YEL027W CDC25P04821 1589 aa10.77□□□□□ -0.69
VMA3YEL027W TY2B-LR1P0C2J3 1770 aa10.75□□□□□ -0.69
VMA3YEL027W TY2B-FP0CX63 1770 aa10.75□□□□□ -0.69
VMA3YEL027W TY2B-GR2P0CX64 1770 aa10.75□□□□□ -0.69
VMA3YEL027W TY2B-CP25384 1770 aa10.75□□□□□ -0.69
VMA3YEL027W TY2B-DR2Q03494 1770 aa10.75□□□□□ -0.69
VMA3YEL027W TY1B-DR1Q03855 1755 aa10.75□□□□□ -0.69
VMA3YEL027W TY2B-DR3Q07791 1770 aaKnown RBP10.75□□□□□ -0.69
VMA3YEL027W TY2B-OR1Q12113 1770 aa10.75□□□□□ -0.69
VMA3YEL027W TY2B-DR1Q12472 1770 aa10.75□□□□□ -0.69
VMA3YEL027W TY2B-OR2Q12501 1770 aa10.75□□□□□ -0.69
VMA3YEL027W RQC2Q12532 1038 aaKnown RBP10.71□□□□□ -0.69
VMA3YEL027W TOP2P06786 1428 aaKnown RBP10.7□□□□□ -0.7
VMA3YEL027W TY1B-BRQ12193 1756 aa10.69□□□□□ -0.7
VMA3YEL027W TY1B-GR3Q12316 1755 aa10.69□□□□□ -0.7
VMA3YEL027W TY1B-ORQ92393 1755 aa10.69□□□□□ -0.7
VMA3YEL027W ESC1Q03661 1658 aaKnown RBP10.69□□□□□ -0.7
VMA3YEL027W DNF1P32660 1571 aa10.69□□□□□ -0.7
VMA3YEL027W MET5P47169 1442 aa10.67□□□□□ -0.7
VMA3YEL027W PAN1P32521 1480 aa10.67□□□□□ -0.7
VMA3YEL027W RKR1Q04781 1562 aa10.65□□□□□ -0.71
VMA3YEL027W POL1P13382 1468 aa10.63□□□□□ -0.71
VMA3YEL027W TY2B-BQ12491 1770 aa10.62□□□□□ -0.71
VMA3YEL027W TY1B-HO13535 1793 aa10.6□□□□□ -0.71
VMA3YEL027W TY1B-DR5P0C2I2 1755 aa10.6□□□□□ -0.71
VMA3YEL027W TY1B-DR6P0C2I3 1755 aa10.6□□□□□ -0.71
VMA3YEL027W TY1B-LR2P0C2I5 1755 aa10.6□□□□□ -0.71
VMA3YEL027W TY1B-LR3P0C2I6 1755 aaKnown RBP10.6□□□□□ -0.71
VMA3YEL027W TY1B-PR1P0C2I9 1755 aaKnown RBP10.6□□□□□ -0.71
VMA3YEL027W TY1B-PR2P0C2J0 1756 aa10.6□□□□□ -0.71
VMA3YEL027W TY1B-PR3P0C2J1 1755 aaKnown RBP10.6□□□□□ -0.71
VMA3YEL027W TY1B-JR1P47098 1755 aa10.6□□□□□ -0.71
VMA3YEL027W TY1B-ML2Q03434 1755 aaKnown RBP10.6□□□□□ -0.71
VMA3YEL027W TY1B-ER1Q03612 1755 aa10.6□□□□□ -0.71
VMA3YEL027W TY1B-ML1Q04711 1755 aaKnown RBP10.6□□□□□ -0.71
VMA3YEL027W TY1B-GR2Q12269 1755 aa10.6□□□□□ -0.71
VMA3YEL027W TY1B-OLQ12273 1755 aa10.6□□□□□ -0.71
VMA3YEL027W TY1B-PLQ12414 1755 aaKnown RBP10.6□□□□□ -0.71
VMA3YEL027W TY1B-DR3Q99231 1755 aa10.6□□□□□ -0.71
VMA3YEL027W MMS22Q06164 1454 aa10.59□□□□□ -0.71
VMA3YEL027W RPA190P10964 1664 aaKnown RBP10.58□□□□□ -0.72
VMA3YEL027W STU1P38198 1513 aa10.54□□□□□ -0.72
VMA3YEL027W LTE1P07866 1435 aa10.54□□□□□ -0.72
VMA3YEL027W SMC4Q12267 1418 aa10.54□□□□□ -0.72
VMA3YEL027W YOR1P53049 1477 aa10.54□□□□□ -0.72
VMA3YEL027W TRM732Q03496 1420 aa10.52□□□□□ -0.73
VMA3YEL027W SPP41P38904 1435 aa10.49□□□□□ -0.73
VMA3YEL027W GEA2P39993 1459 aaKnown RBP10.42□□□□□ -0.74
VMA3YEL027W NUP159P40477 1460 aa10.41□□□□□ -0.74
VMA3YEL027W TSC11P40061 1430 aa10.41□□□□□ -0.74
VMA3YEL027W TY1B-JR2P47100 1755 aaKnown RBP10.39□□□□□ -0.75
VMA3YEL027W TY1B-ER2Q03619 1755 aa10.39□□□□□ -0.75
VMA3YEL027W TY1B-MR1Q04214 1755 aa10.39□□□□□ -0.75
VMA3YEL027W TY1B-MR2Q04670 1755 aaKnown RBP10.39□□□□□ -0.75
VMA3YEL027W TY1B-LR1Q12088 1755 aaKnown RBP10.39□□□□□ -0.75
VMA3YEL027W TY1B-NL1Q12112 1755 aa10.39□□□□□ -0.75
VMA3YEL027W TY1B-GR1Q12141 1755 aa10.39□□□□□ -0.75
VMA3YEL027W TY1B-BLQ12490 1755 aa10.39□□□□□ -0.75
VMA3YEL027W VTH1P40438 1549 aa10.39□□□□□ -0.75
VMA3YEL027W VTH2P40890 1549 aa10.39□□□□□ -0.75
VMA3YEL027W BNI1P41832 1953 aa10.39□□□□□ -0.75
VMA3YEL027W NTE1Q04958 1679 aa10.37□□□□□ -0.75
VMA3YEL027W YRF1-1P0CX20 1796 aa10.37□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms