RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A MTC1P47018 478 aaKnown RBP9.8□□□□□ -0.84
YMR172C-AYMR172C-A FAP1P53971 965 aa9.59□□□□□ -0.87
YMR172C-AYMR172C-A PRY3P47033 881 aa9.02□□□□□ -0.97
YMR172C-AYMR172C-A DRS1P32892 752 aaKnown RBP8.81□□□□□ -1
YMR172C-AYMR172C-A AAD16Q02895 342 aa8.68□□□□□ -1.02
YMR172C-AYMR172C-A PRI1P10363 409 aa8.64□□□□□ -1.03
YMR172C-AYMR172C-A YCK3P39962 524 aa8.46□□□□□ -1.06
YMR172C-AYMR172C-A HAA1Q12753 694 aaKnown RBP8.45□□□□□ -1.06
YMR172C-AYMR172C-A ISW2Q08773 1120 aa8.29□□□□□ -1.08
YMR172C-AYMR172C-A RPG1P38249 964 aaKnown RBP8.21□□□□□ -1.1
YMR172C-AYMR172C-A TSR3Q12094 313 aaKnown RBP8.12□□□□□ -1.11
YMR172C-AYMR172C-A MRPL32P25348 183 aa7.84□□□□□ -1.15
YMR172C-AYMR172C-A DIP2Q12220 943 aaPredicted RBP7.79□□□□□ -1.16
YMR172C-AYMR172C-A YGL015CP33199 130 aa7.71□□□□□ -1.18
YMR172C-AYMR172C-A RSE1Q04693 1361 aaKnown RBP7.62□□□□□ -1.19
YMR172C-AYMR172C-A REB1P21538 810 aa7.46□□□□□ -1.22
YMR172C-AYMR172C-A RPL17AP05740 184 aaKnown RBP7.42□□□□□ -1.22
YMR172C-AYMR172C-A RPL17BP46990 184 aaKnown RBP7.42□□□□□ -1.22
YMR172C-AYMR172C-A AVT3P36062 692 aa7.35□□□□□ -1.23
YMR172C-AYMR172C-A BUD31P25337 157 aaPredicted RBP7.34□□□□□ -1.23
YMR172C-AYMR172C-A CDC27P38042 758 aa7.28□□□□□ -1.24
YMR172C-AYMR172C-A BFR2Q06631 534 aaKnown RBP7.21□□□□□ -1.26
YMR172C-AYMR172C-A UBP10P53874 792 aaPredicted RBP7.19□□□□□ -1.26
YMR172C-AYMR172C-A MAP2P38174 421 aaKnown RBP7.15□□□□□ -1.26
YMR172C-AYMR172C-A YKR023WP36119 530 aaKnown RBP7.11□□□□□ -1.27
YMR172C-AYMR172C-A SPT21P35209 758 aa7.02□□□□□ -1.29
YMR172C-AYMR172C-A HOP09932 586 aa6.97□□□□□ -1.29
YMR172C-AYMR172C-A TFC8Q12308 588 aa6.97□□□□□ -1.29
YMR172C-AYMR172C-A DCD1P06773 312 aa6.94□□□□□ -1.3
YMR172C-AYMR172C-A SIS1P25294 352 aaKnown RBP6.94□□□□□ -1.3
YMR172C-AYMR172C-A TIF4632P39936 914 aaKnown RBP6.93□□□□□ -1.3
YMR172C-AYMR172C-A UBP9P39967 754 aa6.91□□□□□ -1.3
YMR172C-AYMR172C-A TGL3P40308 642 aa6.9□□□□□ -1.3
YMR172C-AYMR172C-A SCY1P53009 804 aa6.88□□□□□ -1.31
YMR172C-AYMR172C-A SLX5P32828 619 aaKnown RBP6.85□□□□□ -1.31
YMR172C-AYMR172C-A BCH2P36122 765 aa6.72□□□□□ -1.33
YMR172C-AYMR172C-A RIM101P33400 625 aa6.66□□□□□ -1.34
YMR172C-AYMR172C-A MST1P07236 462 aa6.53□□□□□ -1.36
YMR172C-AYMR172C-A EPS1P40557 701 aa6.5□□□□□ -1.37
YMR172C-AYMR172C-A YBL029C-AQ3E756 94 aa6.5□□□□□ -1.37
YMR172C-AYMR172C-A BDF1P35817 686 aa6.49□□□□□ -1.37
YMR172C-AYMR172C-A PTP3P40048 928 aa6.49□□□□□ -1.37
YMR172C-AYMR172C-A YIL055CP40523 627 aaKnown RBP6.48□□□□□ -1.37
YMR172C-AYMR172C-A YOR238WQ08634 303 aa6.48□□□□□ -1.37
YMR172C-AYMR172C-A VNX1P42839 908 aa6.43□□□□□ -1.38
YMR172C-AYMR172C-A OXP1P28273 1286 aa6.42□□□□□ -1.38
YMR172C-AYMR172C-A NSR1P27476 414 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
YMR172C-AYMR172C-A SPP1Q03012 353 aa6.37□□□□□ -1.39
YMR172C-AYMR172C-A BBC1P47068 1157 aa6.36□□□□□ -1.39
YMR172C-AYMR172C-A YAH1Q12184 172 aaKnown RBP6.34□□□□□ -1.39
YMR172C-AYMR172C-A YAP5P40574 245 aa6.33□□□□□ -1.4
YMR172C-AYMR172C-A YJL171CP46992 396 aa6.31□□□□□ -1.4
YMR172C-AYMR172C-A WSC3Q12215 556 aa6.31□□□□□ -1.4
YMR172C-AYMR172C-A RSM7P47150 247 aa6.3□□□□□ -1.4
YMR172C-AYMR172C-A AIR2Q12476 344 aaKnown RBP6.29□□□□□ -1.4
YMR172C-AYMR172C-A AI2P03876 854 aa6.27□□□□□ -1.41
YMR172C-AYMR172C-A TIF11P38912 153 aaKnown RBP6.26□□□□□ -1.41
YMR172C-AYMR172C-A FKH1P40466 484 aa6.24□□□□□ -1.41
YMR172C-AYMR172C-A GTT3P39996 337 aa6.21□□□□□ -1.42
YMR172C-AYMR172C-A TFA1P36100 482 aa6.19□□□□□ -1.42
YMR172C-AYMR172C-A LDB19Q12502 818 aa6.17□□□□□ -1.42
YMR172C-AYMR172C-A ULI1P43604 169 aa6.15□□□□□ -1.42
YMR172C-AYMR172C-A BMT6Q12291 365 aa6.15□□□□□ -1.42
YMR172C-AYMR172C-A IOC2Q12072 812 aa6.13□□□□□ -1.43
YMR172C-AYMR172C-A YLR271WQ06152 274 aa6.11□□□□□ -1.43
YMR172C-AYMR172C-A PIB1Q06651 286 aa6.09□□□□□ -1.43
YMR172C-AYMR172C-A MRM1P25270 412 aa6.05□□□□□ -1.44
YMR172C-AYMR172C-A EAP1P36041 632 aaKnown RBP6.05□□□□□ -1.44
YMR172C-AYMR172C-A MSB4Q12317 492 aa6.05□□□□□ -1.44
YMR172C-AYMR172C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
YMR172C-AYMR172C-A PSD2P53037 1138 aaKnown RBP6.02□□□□□ -1.45
YMR172C-AYMR172C-A RTG1P32607 177 aa6□□□□□ -1.45
YMR172C-AYMR172C-A SSP1P38871 571 aa6□□□□□ -1.45
YMR172C-AYMR172C-A NCR1Q12200 1170 aa5.99□□□□□ -1.45
YMR172C-AYMR172C-A TRP5P00931 707 aaKnown RBP5.96□□□□□ -1.46
YMR172C-AYMR172C-A SET4P42948 560 aa5.95□□□□□ -1.46
YMR172C-AYMR172C-A YOL036WQ08206 761 aa5.95□□□□□ -1.46
YMR172C-AYMR172C-A SEC61P32915 480 aa5.94□□□□□ -1.46
YMR172C-AYMR172C-A YNL035CP53962 389 aaKnown RBP5.94□□□□□ -1.46
YMR172C-AYMR172C-A YFR006WP43590 535 aa5.9□□□□□ -1.46
YMR172C-AYMR172C-A YMR1P47147 688 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
YMR172C-AYMR172C-A CST9Q06032 482 aa5.9□□□□□ -1.46
YMR172C-AYMR172C-A DBP1P24784 617 aaKnown RBP5.89□□□□□ -1.47
YMR172C-AYMR172C-A RTG3P38165 486 aa5.89□□□□□ -1.47
YMR172C-AYMR172C-A TFG1P41895 735 aaPredicted RBP5.89□□□□□ -1.47
YMR172C-AYMR172C-A MGA2P40578 1113 aa5.87□□□□□ -1.47
YMR172C-AYMR172C-A VMA1P17255 1071 aaKnown RBP5.84□□□□□ -1.47
YMR172C-AYMR172C-A BCK2P33306 851 aa5.84□□□□□ -1.47
YMR172C-AYMR172C-A VPS29P38759 282 aa5.84□□□□□ -1.47
YMR172C-AYMR172C-A SAM3Q08986 587 aa5.84□□□□□ -1.47
YMR172C-AYMR172C-A SAP30P38429 201 aa5.82□□□□□ -1.48
YMR172C-AYMR172C-A STS1P38637 319 aa5.81□□□□□ -1.48
YMR172C-AYMR172C-A CHL1P22516 861 aaPredicted RBP5.8□□□□□ -1.48
YMR172C-AYMR172C-A DAN4P47179 1161 aa5.8□□□□□ -1.48
YMR172C-AYMR172C-A JIP4Q03361 876 aa5.8□□□□□ -1.48
YMR172C-AYMR172C-A YDL129WQ07555 291 aa5.79□□□□□ -1.48
YMR172C-AYMR172C-A RCR1P38212 213 aa5.77□□□□□ -1.49
YMR172C-AYMR172C-A ABP1P15891 592 aaKnown RBP5.76□□□□□ -1.49
YMR172C-AYMR172C-A PRE3P38624 215 aa5.75□□□□□ -1.49
YMR172C-AYMR172C-A GYP5Q12344 894 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms