RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C DRS1P32892 752 aaKnown RBP7.74□□□□□ -1.17
CDH1YGL003C MTC1P47018 478 aaKnown RBP7.55□□□□□ -1.2
CDH1YGL003C BFR2Q06631 534 aaKnown RBP6.78□□□□□ -1.32
CDH1YGL003C DIP2Q12220 943 aaPredicted RBP6.53□□□□□ -1.36
CDH1YGL003C TFA1P36100 482 aa6.51□□□□□ -1.37
CDH1YGL003C AVT3P36062 692 aa6.5□□□□□ -1.37
CDH1YGL003C FAP1P53971 965 aa6.17□□□□□ -1.42
CDH1YGL003C RSE1Q04693 1361 aaKnown RBP6.13□□□□□ -1.43
CDH1YGL003C ISW2Q08773 1120 aa6.12□□□□□ -1.43
CDH1YGL003C RPG1P38249 964 aaKnown RBP6□□□□□ -1.45
CDH1YGL003C PRI1P10363 409 aa5.96□□□□□ -1.45
CDH1YGL003C RPL17AP05740 184 aaKnown RBP5.88□□□□□ -1.47
CDH1YGL003C RPL17BP46990 184 aaKnown RBP5.88□□□□□ -1.47
CDH1YGL003C AAD16Q02895 342 aa5.85□□□□□ -1.47
CDH1YGL003C REB1P21538 810 aa5.8□□□□□ -1.48
CDH1YGL003C PRY3P47033 881 aa5.8□□□□□ -1.48
CDH1YGL003C RQC2Q12532 1038 aaKnown RBP5.75□□□□□ -1.49
CDH1YGL003C SPT21P35209 758 aa5.68□□□□□ -1.5
CDH1YGL003C RIM101P33400 625 aa5.65□□□□□ -1.5
CDH1YGL003C TSR3Q12094 313 aaKnown RBP5.65□□□□□ -1.5
CDH1YGL003C PTP3P40048 928 aa5.53□□□□□ -1.52
CDH1YGL003C HAA1Q12753 694 aaKnown RBP5.49□□□□□ -1.53
CDH1YGL003C SSP1P38871 571 aa5.48□□□□□ -1.53
CDH1YGL003C OXP1P28273 1286 aa5.47□□□□□ -1.53
CDH1YGL003C MRPL32P25348 183 aa5.46□□□□□ -1.54
CDH1YGL003C YKR023WP36119 530 aaKnown RBP5.45□□□□□ -1.54
CDH1YGL003C DMA1P38823 416 aa5.4□□□□□ -1.54
CDH1YGL003C YIL055CP40523 627 aaKnown RBP5.4□□□□□ -1.54
CDH1YGL003C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.4□□□□□ -1.55not detected
CDH1YGL003C YAH1Q12184 172 aaKnown RBP5.39□□□□□ -1.55
CDH1YGL003C TFC8Q12308 588 aa5.35□□□□□ -1.55
CDH1YGL003C YLR271WQ06152 274 aa5.34□□□□□ -1.55
CDH1YGL003C HOP09932 586 aa5.32□□□□□ -1.56
CDH1YGL003C RSM7P47150 247 aa5.32□□□□□ -1.56
CDH1YGL003C TAF7Q05021 590 aa5.31□□□□□ -1.56
CDH1YGL003C CDC27P38042 758 aa5.29□□□□□ -1.56
CDH1YGL003C YCK3P39962 524 aa5.28□□□□□ -1.56
CDH1YGL003C MGA2P40578 1113 aa5.28□□□□□ -1.56
CDH1YGL003C DCD1P06773 312 aa5.26□□□□□ -1.57
CDH1YGL003C AI2P03876 854 aa5.21□□□□□ -1.58
CDH1YGL003C PSD2P53037 1138 aaKnown RBP5.2□□□□□ -1.58
CDH1YGL003C BCH2P36122 765 aa5.19□□□□□ -1.58
CDH1YGL003C BBC1P47068 1157 aa5.18□□□□□ -1.58
CDH1YGL003C CST9Q06032 482 aa5.18□□□□□ -1.58
CDH1YGL003C EPS1P40557 701 aa5.12□□□□□ -1.59
CDH1YGL003C UBP10P53874 792 aaPredicted RBP5.1□□□□□ -1.59
CDH1YGL003C SAS10Q12136 610 aaPredicted RBP5.1□□□□□ -1.59
CDH1YGL003C BDF1P35817 686 aa5.08□□□□□ -1.6
CDH1YGL003C SCY1P53009 804 aa5.07□□□□□ -1.6
CDH1YGL003C MRM1P25270 412 aa5.05□□□□□ -1.6
CDH1YGL003C YGL015CP33199 130 aa5.05□□□□□ -1.6
CDH1YGL003C MAP2P38174 421 aaKnown RBP5.04□□□□□ -1.6
CDH1YGL003C RAM2P29703 316 aa5.03□□□□□ -1.6
CDH1YGL003C LEO1P38439 464 aa5.03□□□□□ -1.6
CDH1YGL003C RTG3P38165 486 aa5.01□□□□□ -1.61
CDH1YGL003C LEU3P08638 886 aa5□□□□□ -1.61
CDH1YGL003C SLX5P32828 619 aaKnown RBP4.99□□□□□ -1.61
CDH1YGL003C RCR1P38212 213 aa4.97□□□□□ -1.61
CDH1YGL003C SET1P38827 1080 aaKnown RBP4.97□□□□□ -1.61
CDH1YGL003C MAK11P20484 414 aaKnown RBP4.96□□□□□ -1.62
CDH1YGL003C IFH1P39520 1085 aa4.96□□□□□ -1.62
CDH1YGL003C YPR148CQ06523 435 aa4.94□□□□□ -1.62
CDH1YGL003C VPS29P38759 282 aa4.93□□□□□ -1.62
CDH1YGL003C CKB1P43639 278 aa4.93□□□□□ -1.62
CDH1YGL003C YMR1P47147 688 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
CDH1YGL003C VPS70P47161 811 aa4.89□□□□□ -1.63
CDH1YGL003C NOP53Q12080 455 aaKnown RBP4.89□□□□□ -1.63
CDH1YGL003C COQ8P27697 501 aa4.88□□□□□ -1.63
CDH1YGL003C TIF4632P39936 914 aaKnown RBP4.88□□□□□ -1.63
CDH1YGL003C BUD31P25337 157 aaPredicted RBP4.86□□□□□ -1.63
CDH1YGL003C NSR1P27476 414 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
CDH1YGL003C SPB4P25808 606 aaPredicted RBP4.86□□□□□ -1.63
CDH1YGL003C STS1P38637 319 aa4.86□□□□□ -1.63
CDH1YGL003C RPN1P38764 993 aaKnown RBP4.86□□□□□ -1.63
CDH1YGL003C DBP1P24784 617 aaKnown RBP4.85□□□□□ -1.63
CDH1YGL003C TGL3P40308 642 aa4.84□□□□□ -1.63
CDH1YGL003C YOR238WQ08634 303 aa4.84□□□□□ -1.63
CDH1YGL003C MIF2P35201 549 aa4.83□□□□□ -1.64
CDH1YGL003C YAP5P40574 245 aa4.82□□□□□ -1.64
CDH1YGL003C EDS1P38073 919 aa4.81□□□□□ -1.64
CDH1YGL003C YFR006WP43590 535 aa4.81□□□□□ -1.64
CDH1YGL003C DSF2P38213 736 aa4.8□□□□□ -1.64
CDH1YGL003C PBS2P08018 668 aa4.8□□□□□ -1.64
CDH1YGL003C REF2P42073 533 aaPredicted RBP4.78□□□□□ -1.64
CDH1YGL003C PTC3P34221 468 aaKnown RBP4.77□□□□□ -1.65
CDH1YGL003C VMA1P17255 1071 aaKnown RBP4.75□□□□□ -1.65
CDH1YGL003C MAK21Q12176 1025 aaKnown RBP4.75□□□□□ -1.65
CDH1YGL003C MAM3Q12296 706 aa4.75□□□□□ -1.65
CDH1YGL003C YNR021WP53723 404 aaKnown RBP4.74□□□□□ -1.65
CDH1YGL003C PIB1Q06651 286 aa4.74□□□□□ -1.65
CDH1YGL003C MST1P07236 462 aa4.72□□□□□ -1.65
CDH1YGL003C SAM3Q08986 587 aa4.72□□□□□ -1.65
CDH1YGL003C ATH1P48016 1211 aa4.72□□□□□ -1.65
CDH1YGL003C GRE2Q12068 342 aaKnown RBP4.72□□□□□ -1.65
CDH1YGL003C COX6P00427 148 aa4.71□□□□□ -1.66
CDH1YGL003C GUT1P32190 709 aa4.71□□□□□ -1.66
CDH1YGL003C IES2P40154 320 aa4.71□□□□□ -1.66
CDH1YGL003C GTT3P39996 337 aa4.69□□□□□ -1.66
CDH1YGL003C AIM7Q12156 149 aa4.69□□□□□ -1.66
CDH1YGL003C NUP42P49686 430 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms