RNA–Protein interactions for RNA: YDR325W

YCG1, Transcript of Subunit of the condensin complex, yeast

Gene YCG1, Length 3,108 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCG1	YDR325W	DRS1	P32892	752 aa	Known RBP	7.24	□□□□□ -1.25
YCG1	YDR325W	MTC1	P47018	478 aa	Known RBP	6.65	□□□□□ -1.35
YCG1	YDR325W	TFA1	P36100	482 aa		6.59	□□□□□ -1.36
YCG1	YDR325W	BFR2	Q06631	534 aa	Known RBP	6.51	□□□□□ -1.37
YCG1	YDR325W	RQC2	Q12532	1038 aa	Known RBP	6.11	□□□□□ -1.43
YCG1	YDR325W	AVT3	P36062	692 aa		6.11	□□□□□ -1.43
YCG1	YDR325W	DIP2	Q12220	943 aa	Predicted RBP	5.98	□□□□□ -1.45
YCG1	YDR325W	TAF7	Q05021	590 aa		5.79	□□□□□ -1.48
YCG1	YDR325W	DMA1	P38823	416 aa		5.63	□□□□□ -1.51
YCG1	YDR325W	LEO1	P38439	464 aa		5.47	□□□□□ -1.53
YCG1	YDR325W	RSE1	Q04693	1361 aa	Known RBP	5.46	□□□□□ -1.54
YCG1	YDR325W	PTP3	P40048	928 aa		5.32	□□□□□ -1.56
YCG1	YDR325W	ISW2	Q08773	1120 aa		5.24	□□□□□ -1.57
YCG1	YDR325W	LEU3	P08638	886 aa		5.22	□□□□□ -1.57
YCG1	YDR325W	RPL17A	P05740	184 aa	Known RBP	5.21	□□□□□ -1.58
YCG1	YDR325W	RPL17B	P46990	184 aa	Known RBP	5.21	□□□□□ -1.58
YCG1	YDR325W	SAS10	Q12136	610 aa	Predicted RBP	5.2	□□□□□ -1.58
YCG1	YDR325W	SSP1	P38871	571 aa		5.19	□□□□□ -1.58
YCG1	YDR325W	RIM101	P33400	625 aa		5.19	□□□□□ -1.58
YCG1	YDR325W	RPG1	P38249	964 aa	Known RBP	5.17	□□□□□ -1.58
YCG1	YDR325W	SPT21	P35209	758 aa		5.14	□□□□□ -1.59
YCG1	YDR325W	REB1	P21538	810 aa		5.1	□□□□□ -1.59
YCG1	YDR325W	OXP1	P28273	1286 aa		5.05	□□□□□ -1.6
YCG1	YDR325W	DMA2	P53924	522 aa		5.04	□□□□□ -1.6
YCG1	YDR325W	PRI1	P10363	409 aa		5.01	□□□□□ -1.61
YCG1	YDR325W	ABP1	P15891	592 aa	Known RBP	5.01	□□□□□ -1.61
YCG1	YDR325W	RPN1	P38764	993 aa	Known RBP	5.01	□□□□□ -1.61
YCG1	YDR325W	YLR271W	Q06152	274 aa		5.01	□□□□□ -1.61
YCG1	YDR325W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
YCG1	YDR325W	YAH1	Q12184	172 aa	Known RBP	4.99	□□□□□ -1.61
YCG1	YDR325W	MGA2	P40578	1113 aa		4.95	□□□□□ -1.62
YCG1	YDR325W	RLF2	Q12495	606 aa		4.93	□□□□□ -1.62
YCG1	YDR325W	YIL055C	P40523	627 aa	Known RBP	4.9	□□□□□ -1.63
YCG1	YDR325W	CKB1	P43639	278 aa		4.89	□□□□□ -1.63
YCG1	YDR325W	CST9	Q06032	482 aa		4.88	□□□□□ -1.63
YCG1	YDR325W	FAP1	P53971	965 aa		4.88	□□□□□ -1.63
YCG1	YDR325W	RSM7	P47150	247 aa		4.85	□□□□□ -1.63
YCG1	YDR325W	AAD16	Q02895	342 aa		4.84	□□□□□ -1.63
YCG1	YDR325W	YKR023W	P36119	530 aa	Known RBP	4.83	□□□□□ -1.64
YCG1	YDR325W	SPB4	P25808	606 aa	Predicted RBP	4.83	□□□□□ -1.64
YCG1	YDR325W	YPR148C	Q06523	435 aa		4.83	□□□□□ -1.64
YCG1	YDR325W	IFH1	P39520	1085 aa		4.82	□□□□□ -1.64
YCG1	YDR325W	PSD2	P53037	1138 aa	Known RBP	4.81	□□□□□ -1.64
YCG1	YDR325W	TSR3	Q12094	313 aa	Known RBP	4.8	□□□□□ -1.64
YCG1	YDR325W	SET1	P38827	1080 aa	Known RBP	4.79	□□□□□ -1.64
YCG1	YDR325W	RAM2	P29703	316 aa		4.79	□□□□□ -1.64
YCG1	YDR325W	VPS70	P47161	811 aa		4.78	□□□□□ -1.64
YCG1	YDR325W	DSF2	P38213	736 aa		4.76	□□□□□ -1.65
YCG1	YDR325W	KIN1	P13185	1064 aa		4.75	□□□□□ -1.65
YCG1	YDR325W	AI2	P03876	854 aa		4.73	□□□□□ -1.65
YCG1	YDR325W	YNR021W	P53723	404 aa	Known RBP	4.72	□□□□□ -1.65
YCG1	YDR325W	TFC8	Q12308	588 aa		4.72	□□□□□ -1.65
YCG1	YDR325W	PBS2	P08018	668 aa		4.7	□□□□□ -1.66
YCG1	YDR325W	HO	P09932	586 aa		4.7	□□□□□ -1.66
YCG1	YDR325W	AIM7	Q12156	149 aa		4.69	□□□□□ -1.66
YCG1	YDR325W	RCR1	P38212	213 aa		4.68	□□□□□ -1.66
YCG1	YDR325W	HGH1	P48362	394 aa	Known RBP	4.67	□□□□□ -1.66
YCG1	YDR325W	NOP8	Q08287	484 aa	Predicted RBP	4.67	□□□□□ -1.66
YCG1	YDR325W	GLC3	P32775	704 aa		4.66	□□□□□ -1.66
YCG1	YDR325W	ORC1	P54784	914 aa	Predicted RBP	4.66	□□□□□ -1.66
YCG1	YDR325W	YML020W	Q03722	664 aa		4.66	□□□□□ -1.66
YCG1	YDR325W	DCD1	P06773	312 aa		4.66	□□□□□ -1.66
YCG1	YDR325W	GUA1	P38625	525 aa	Known RBP	4.66	□□□□□ -1.66
YCG1	YDR325W	AIM44	Q99299	758 aa		4.66	□□□□□ -1.66
YCG1	YDR325W	MAK11	P20484	414 aa	Known RBP	4.64	□□□□□ -1.67
YCG1	YDR325W	NUP42	P49686	430 aa	Known RBP	4.63	□□□□□ -1.67
YCG1	YDR325W	DIT2	P21595	489 aa		4.63	□□□□□ -1.67
YCG1	YDR325W	BBC1	P47068	1157 aa		4.63	□□□□□ -1.67
YCG1	YDR325W	NAP1	P25293	417 aa	Known RBP	4.62	□□□□□ -1.67
YCG1	YDR325W	MAM3	Q12296	706 aa		4.62	□□□□□ -1.67
YCG1	YDR325W	BCH2	P36122	765 aa		4.61	□□□□□ -1.67
YCG1	YDR325W	MRM1	P25270	412 aa		4.61	□□□□□ -1.67
YCG1	YDR325W	SLX8	P40072	274 aa		4.61	□□□□□ -1.67
YCG1	YDR325W	IES2	P40154	320 aa		4.6	□□□□□ -1.67
YCG1	YDR325W	HPC2	Q01448	625 aa		4.6	□□□□□ -1.67
YCG1	YDR325W	MRPL32	P25348	183 aa		4.6	□□□□□ -1.67
YCG1	YDR325W	SSA1	P10591	642 aa	Known RBP	4.59	□□□□□ -1.67
YCG1	YDR325W	RTG3	P38165	486 aa		4.59	□□□□□ -1.67
YCG1	YDR325W	GEF1	P37020	779 aa		4.59	□□□□□ -1.68
YCG1	YDR325W	SUB2	Q07478	446 aa	Known RBP	4.58	□□□□□ -1.68
YCG1	YDR325W	MAK21	Q12176	1025 aa	Known RBP	4.58	□□□□□ -1.68
YCG1	YDR325W	CDC27	P38042	758 aa		4.57	□□□□□ -1.68
YCG1	YDR325W	IOC4	Q04213	475 aa		4.57	□□□□□ -1.68
YCG1	YDR325W	COQ8	P27697	501 aa		4.57	□□□□□ -1.68
YCG1	YDR325W	REF2	P42073	533 aa	Predicted RBP	4.57	□□□□□ -1.68
YCG1	YDR325W	TFB3	Q03290	321 aa		4.57	□□□□□ -1.68
YCG1	YDR325W	NOP53	Q12080	455 aa	Known RBP	4.56	□□□□□ -1.68
YCG1	YDR325W	EPS1	P40557	701 aa		4.55	□□□□□ -1.68
YCG1	YDR325W	COX6	P00427	148 aa		4.54	□□□□□ -1.68
YCG1	YDR325W	ATF2	P53296	535 aa		4.53	□□□□□ -1.68
YCG1	YDR325W	PKC1	P24583	1151 aa		4.52	□□□□□ -1.69
YCG1	YDR325W	BDF1	P35817	686 aa		4.52	□□□□□ -1.69
YCG1	YDR325W	VPS29	P38759	282 aa		4.52	□□□□□ -1.69
YCG1	YDR325W	PRY3	P47033	881 aa		4.52	□□□□□ -1.69
YCG1	YDR325W	GLN1	P32288	370 aa	Known RBP	4.51	□□□□□ -1.69
YCG1	YDR325W	MRX12	P47084	519 aa		4.5	□□□□□ -1.69
YCG1	YDR325W	BRL1	P38770	471 aa		4.5	□□□□□ -1.69
YCG1	YDR325W	EDS1	P38073	919 aa		4.49	□□□□□ -1.69
YCG1	YDR325W	BIM1	P40013	344 aa		4.49	□□□□□ -1.69
YCG1	YDR325W	ATG32	P40458	529 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms