RNA–Protein interactions for RNA: YLR104W

LCL2, Transcript of Putative protein of unknown function, yeastyeast

Gene LCL2, Length 396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCL2YLR104W FAP1P53971 965 aa13.01□□□□□ -0.33
LCL2YLR104W MTC1P47018 478 aaKnown RBP12.37□□□□□ -0.43
LCL2YLR104W PRY3P47033 881 aa12.34□□□□□ -0.43
LCL2YLR104W YCK3P39962 524 aa11.73□□□□□ -0.53
LCL2YLR104W AAD16Q02895 342 aa11.5□□□□□ -0.57
LCL2YLR104W HAA1Q12753 694 aaKnown RBP11.42□□□□□ -0.58
LCL2YLR104W PRI1P10363 409 aa11.39□□□□□ -0.59
LCL2YLR104W TSR3Q12094 313 aaKnown RBP10.7□□□□□ -0.7
LCL2YLR104W RPG1P38249 964 aaKnown RBP10.57□□□□□ -0.72
LCL2YLR104W ISW2Q08773 1120 aa10.56□□□□□ -0.72
LCL2YLR104W YGL015CP33199 130 aa10.24□□□□□ -0.77
LCL2YLR104W MRPL32P25348 183 aa10.2□□□□□ -0.78
LCL2YLR104W BUD31P25337 157 aaPredicted RBP10.18□□□□□ -0.78
LCL2YLR104W DRS1P32892 752 aaKnown RBP9.86□□□□□ -0.83
LCL2YLR104W CDC27P38042 758 aa9.51□□□□□ -0.89
LCL2YLR104W SIS1P25294 352 aaKnown RBP9.49□□□□□ -0.89
LCL2YLR104W RSE1Q04693 1361 aaKnown RBP9.39□□□□□ -0.91
LCL2YLR104W MAP2P38174 421 aaKnown RBP9.37□□□□□ -0.91
LCL2YLR104W UBP10P53874 792 aaPredicted RBP9.35□□□□□ -0.91
LCL2YLR104W REB1P21538 810 aa9.3□□□□□ -0.92
LCL2YLR104W DIP2Q12220 943 aaPredicted RBP9.26□□□□□ -0.93
LCL2YLR104W RPL17AP05740 184 aaKnown RBP9.24□□□□□ -0.93
LCL2YLR104W RPL17BP46990 184 aaKnown RBP9.24□□□□□ -0.93
LCL2YLR104W UBP9P39967 754 aa9.14□□□□□ -0.95
LCL2YLR104W YKR023WP36119 530 aaKnown RBP9.06□□□□□ -0.96
LCL2YLR104W TGL3P40308 642 aa8.96□□□□□ -0.98
LCL2YLR104W TIF4632P39936 914 aaKnown RBP8.93□□□□□ -0.98
LCL2YLR104W DCD1P06773 312 aa8.92□□□□□ -0.98
LCL2YLR104W HOP09932 586 aa8.87□□□□□ -0.99
LCL2YLR104W SCY1P53009 804 aa8.87□□□□□ -0.99
LCL2YLR104W TFC8Q12308 588 aa8.84□□□□□ -0.99
LCL2YLR104W SLX5P32828 619 aaKnown RBP8.81□□□□□ -1
LCL2YLR104W SPT21P35209 758 aa8.78□□□□□ -1
LCL2YLR104W YBL029C-AQ3E756 94 aa8.59□□□□□ -1.03
LCL2YLR104W BCH2P36122 765 aa8.5□□□□□ -1.05
LCL2YLR104W AVT3P36062 692 aa8.48□□□□□ -1.05
LCL2YLR104W MST1P07236 462 aa8.42□□□□□ -1.06
LCL2YLR104W VNX1P42839 908 aa8.39□□□□□ -1.07
LCL2YLR104W AIR2Q12476 344 aaKnown RBP8.35□□□□□ -1.07
LCL2YLR104W SPP1Q03012 353 aa8.28□□□□□ -1.08
LCL2YLR104W FKH1P40466 484 aa8.26□□□□□ -1.09
LCL2YLR104W YOR238WQ08634 303 aa8.26□□□□□ -1.09
LCL2YLR104W YJL171CP46992 396 aa8.25□□□□□ -1.09
LCL2YLR104W BDF1P35817 686 aa8.17□□□□□ -1.1
LCL2YLR104W WSC3Q12215 556 aa8.17□□□□□ -1.1
LCL2YLR104W EPS1P40557 701 aa8.15□□□□□ -1.1
LCL2YLR104W TIF11P38912 153 aaKnown RBP8.08□□□□□ -1.12
LCL2YLR104W NSR1P27476 414 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
LCL2YLR104W RIM101P33400 625 aa8.05□□□□□ -1.12
LCL2YLR104W BMT6Q12291 365 aa8.03□□□□□ -1.12
LCL2YLR104W LDB19Q12502 818 aa8□□□□□ -1.13
LCL2YLR104W YAP5P40574 245 aa7.98□□□□□ -1.13
LCL2YLR104W IOC2Q12072 812 aa7.91□□□□□ -1.14
LCL2YLR104W ULI1P43604 169 aa7.87□□□□□ -1.15
LCL2YLR104W GTT3P39996 337 aa7.83□□□□□ -1.16
LCL2YLR104W OXP1P28273 1286 aa7.77□□□□□ -1.17
LCL2YLR104W RGA2Q06407 1009 aa7.75□□□□□ -1.17
LCL2YLR104W RTG1P32607 177 aa7.68□□□□□ -1.18
LCL2YLR104W PIB1Q06651 286 aa7.65□□□□□ -1.18
LCL2YLR104W PTP3P40048 928 aa7.64□□□□□ -1.19
LCL2YLR104W NCR1Q12200 1170 aa7.63□□□□□ -1.19
LCL2YLR104W BBC1P47068 1157 aa7.62□□□□□ -1.19
LCL2YLR104W BCK2P33306 851 aa7.61□□□□□ -1.19
LCL2YLR104W MSB4Q12317 492 aa7.58□□□□□ -1.2
LCL2YLR104W TRP5P00931 707 aaKnown RBP7.57□□□□□ -1.2
LCL2YLR104W AI2P03876 854 aa7.56□□□□□ -1.2
LCL2YLR104W EAP1P36041 632 aaKnown RBP7.55□□□□□ -1.2
LCL2YLR104W YIL055CP40523 627 aaKnown RBP7.53□□□□□ -1.2
LCL2YLR104W SEC61P32915 480 aa7.51□□□□□ -1.21
LCL2YLR104W SET4P42948 560 aa7.51□□□□□ -1.21
LCL2YLR104W YNL035CP53962 389 aaKnown RBP7.51□□□□□ -1.21
LCL2YLR104W YOL036WQ08206 761 aa7.5□□□□□ -1.21
LCL2YLR104W INO80P53115 1489 aa7.49□□□□□ -1.21
LCL2YLR104W RSM7P47150 247 aa7.48□□□□□ -1.21
LCL2YLR104W SAP30P38429 201 aa7.44□□□□□ -1.22
LCL2YLR104W CHL1P22516 861 aaPredicted RBP7.42□□□□□ -1.22
LCL2YLR104W RGA1P39083 1007 aa7.39□□□□□ -1.23
LCL2YLR104W BFR2Q06631 534 aaKnown RBP7.37□□□□□ -1.23
LCL2YLR104W MON2P48563 1636 aaPredicted RBP7.37□□□□□ -1.23
LCL2YLR104W PRE3P38624 215 aa7.35□□□□□ -1.23
LCL2YLR104W TFG1P41895 735 aaPredicted RBP7.34□□□□□ -1.23
LCL2YLR104W DAN4P47179 1161 aa7.33□□□□□ -1.24
LCL2YLR104W XDJ1P39102 459 aa7.31□□□□□ -1.24
LCL2YLR104W YDL129WQ07555 291 aa7.3□□□□□ -1.24
LCL2YLR104W VRP1P37370 817 aa7.27□□□□□ -1.25
LCL2YLR104W YAH1Q12184 172 aaKnown RBP7.27□□□□□ -1.25
LCL2YLR104W DPS1P04802 557 aaKnown RBP7.26□□□□□ -1.25
LCL2YLR104W MRM1P25270 412 aa7.22□□□□□ -1.25
LCL2YLR104W SRC1Q03707 834 aa7.22□□□□□ -1.25
LCL2YLR104W YDR344CQ05510 147 aa7.22□□□□□ -1.25
LCL2YLR104W VMA1P17255 1071 aaKnown RBP7.21□□□□□ -1.26
LCL2YLR104W MIF2P35201 549 aa7.21□□□□□ -1.26
LCL2YLR104W SAM3Q08986 587 aa7.21□□□□□ -1.26
LCL2YLR104W PSD2P53037 1138 aaKnown RBP7.19□□□□□ -1.26
LCL2YLR104W JIP4Q03361 876 aa7.19□□□□□ -1.26
LCL2YLR104W DBP1P24784 617 aaKnown RBP7.17□□□□□ -1.26
LCL2YLR104W YFR006WP43590 535 aa7.17□□□□□ -1.26
LCL2YLR104W YMR1P47147 688 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
LCL2YLR104W VPS29P38759 282 aa7.11□□□□□ -1.27
LCL2YLR104W STS1P38637 319 aa7.1□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms