RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	DRS1	P32892	752 aa	Known RBP	6.84	□□□□□ -1.31
TMA108	YIL137C	TFA1	P36100	482 aa		6.6	□□□□□ -1.35
TMA108	YIL137C	RQC2	Q12532	1038 aa	Known RBP	6.27	□□□□□ -1.41
TMA108	YIL137C	BFR2	Q06631	534 aa	Known RBP	6.22	□□□□□ -1.41
TMA108	YIL137C	TAF7	Q05021	590 aa		6.15	□□□□□ -1.43
TMA108	YIL137C	MTC1	P47018	478 aa	Known RBP	6.13	□□□□□ -1.43
TMA108	YIL137C	AVT3	P36062	692 aa		5.93	□□□□□ -1.46
TMA108	YIL137C	DMA1	P38823	416 aa		5.66	□□□□□ -1.5
TMA108	YIL137C	LEO1	P38439	464 aa		5.66	□□□□□ -1.5
TMA108	YIL137C	FAP1	P53971	965 aa		5.62	□□□□□ -1.51
TMA108	YIL137C	DIP2	Q12220	943 aa	Predicted RBP	5.61	□□□□□ -1.51
TMA108	YIL137C	ABP1	P15891	592 aa	Known RBP	5.4	□□□□□ -1.54
TMA108	YIL137C	MON2	P48563	1636 aa	Predicted RBP	5.4	□□□□□ -1.54
TMA108	YIL137C	IFH1	P39520	1085 aa		5.33	□□□□□ -1.56
TMA108	YIL137C	LEU3	P08638	886 aa		5.32	□□□□□ -1.56
TMA108	YIL137C	PRY3	P47033	881 aa		5.32	□□□□□ -1.56
TMA108	YIL137C	SAS10	Q12136	610 aa	Predicted RBP	5.3	□□□□□ -1.56
TMA108	YIL137C	INO80	P53115	1489 aa		5.27	□□□□□ -1.57
TMA108	YIL137C	ORC1	P54784	914 aa	Predicted RBP	5.24	□□□□□ -1.57
TMA108	YIL137C	IOC4	Q04213	475 aa		5.23	□□□□□ -1.57
TMA108	YIL137C	TY1B-DR4	Q07793	1604 aa		5.22	□□□□□ -1.57
TMA108	YIL137C	NAP1	P25293	417 aa	Known RBP	5.21	□□□□□ -1.57
TMA108	YIL137C	TCB3	Q03640	1545 aa	Known RBP	5.2	□□□□□ -1.58
TMA108	YIL137C	DMA2	P53924	522 aa		5.18	□□□□□ -1.58
TMA108	YIL137C	SWR1	Q05471	1514 aa		5.16	□□□□□ -1.58
TMA108	YIL137C	SGS1	P35187	1447 aa		5.14	□□□□□ -1.59
TMA108	YIL137C	PTP3	P40048	928 aa		5.08	□□□□□ -1.6
TMA108	YIL137C	URN1	Q06525	465 aa	Known RBP	5.07	□□□□□ -1.6
TMA108	YIL137C	DNA2	P38859	1522 aa		5.07	□□□□□ -1.6
TMA108	YIL137C	YCK3	P39962	524 aa		5.06	□□□□□ -1.6
TMA108	YIL137C	AAD16	Q02895	342 aa		5.06	□□□□□ -1.6
TMA108	YIL137C	RLF2	Q12495	606 aa		5.05	□□□□□ -1.6
TMA108	YIL137C	KOG1	P38873	1557 aa		5.05	□□□□□ -1.6
TMA108	YIL137C	PRI1	P10363	409 aa		5.04	□□□□□ -1.6
TMA108	YIL137C	HSL1	P34244	1518 aa		5.01	□□□□□ -1.61
TMA108	YIL137C	RPN1	P38764	993 aa	Known RBP	5.01	□□□□□ -1.61
TMA108	YIL137C	NOP8	Q08287	484 aa	Predicted RBP	4.99	□□□□□ -1.61
TMA108	YIL137C	RSE1	Q04693	1361 aa	Known RBP	4.99	□□□□□ -1.61
TMA108	YIL137C	SPT6	P23615	1451 aa	Known RBP	4.97	□□□□□ -1.61
TMA108	YIL137C	SSP1	P38871	571 aa		4.96	□□□□□ -1.61
TMA108	YIL137C	RIM101	P33400	625 aa		4.96	□□□□□ -1.62
TMA108	YIL137C	HAA1	Q12753	694 aa	Known RBP	4.95	□□□□□ -1.62
TMA108	YIL137C	CKB1	P43639	278 aa		4.93	□□□□□ -1.62
TMA108	YIL137C	AIM44	Q99299	758 aa		4.93	□□□□□ -1.62
TMA108	YIL137C	HIR3	P47171	1648 aa		4.9	□□□□□ -1.62
TMA108	YIL137C	SPT21	P35209	758 aa		4.9	□□□□□ -1.62
TMA108	YIL137C	ATG36	P46983	293 aa		4.89	□□□□□ -1.63
TMA108	YIL137C	YML020W	Q03722	664 aa		4.88	□□□□□ -1.63
TMA108	YIL137C	SPA2	P23201	1466 aa	Known RBP	4.88	□□□□□ -1.63
TMA108	YIL137C	OXP1	P28273	1286 aa		4.86	□□□□□ -1.63
TMA108	YIL137C	THO2	P53552	1597 aa	Known RBP	4.86	□□□□□ -1.63
TMA108	YIL137C	TOP1	P04786	769 aa		4.84	□□□□□ -1.63
TMA108	YIL137C	YLR271W	Q06152	274 aa		4.83	□□□□□ -1.64
TMA108	YIL137C	SNU71	P53207	620 aa	Known RBP	4.82	□□□□□ -1.64
TMA108	YIL137C	YPR148C	Q06523	435 aa		4.81	□□□□□ -1.64
TMA108	YIL137C	SSN2	P38931	1420 aa		4.81	□□□□□ -1.64
TMA108	YIL137C	BUD4	P47136	1447 aa		4.79	□□□□□ -1.64
TMA108	YIL137C	MRX12	P47084	519 aa		4.79	□□□□□ -1.64
TMA108	YIL137C	MAM3	Q12296	706 aa		4.79	□□□□□ -1.64
TMA108	YIL137C	XRN1	P22147	1528 aa	Known RBP	4.78	□□□□□ -1.64
TMA108	YIL137C	SWE1	P32944	819 aa		4.78	□□□□□ -1.64
TMA108	YIL137C	ECM5	Q03214	1411 aa		4.77	□□□□□ -1.65
TMA108	YIL137C	PAM1	P37304	830 aa	Known RBP	4.76	□□□□□ -1.65
TMA108	YIL137C	PEP1	P32319	1579 aa		4.76	□□□□□ -1.65
TMA108	YIL137C	RPL17A	P05740	184 aa	Known RBP	4.76	□□□□□ -1.65
TMA108	YIL137C	SLX8	P40072	274 aa		4.76	□□□□□ -1.65
TMA108	YIL137C	RPL17B	P46990	184 aa	Known RBP	4.76	□□□□□ -1.65
TMA108	YIL137C	YRB30	P53107	440 aa	Predicted RBP	4.76	□□□□□ -1.65
TMA108	YIL137C	LAM6	Q08001	693 aa		4.76	□□□□□ -1.65
TMA108	YIL137C	MDS3	P53094	1487 aa		4.76	□□□□□ -1.65
TMA108	YIL137C	SIN3	P22579	1536 aa		4.75	□□□□□ -1.65
TMA108	YIL137C	ATG2	P53855	1592 aa		4.75	□□□□□ -1.65
TMA108	YIL137C	ISW2	Q08773	1120 aa		4.75	□□□□□ -1.65
TMA108	YIL137C	DSF2	P38213	736 aa		4.74	□□□□□ -1.65
TMA108	YIL137C	REV3	P14284	1504 aa		4.74	□□□□□ -1.65
TMA108	YIL137C	RPG1	P38249	964 aa	Known RBP	4.74	□□□□□ -1.65
TMA108	YIL137C	FAR11	P53917	953 aa		4.73	□□□□□ -1.65
TMA108	YIL137C	TSR3	Q12094	313 aa	Known RBP	4.73	□□□□□ -1.65
TMA108	YIL137C	KIN1	P13185	1064 aa		4.73	□□□□□ -1.65
TMA108	YIL137C	MGA2	P40578	1113 aa		4.73	□□□□□ -1.65
TMA108	YIL137C	CST9	Q06032	482 aa		4.73	□□□□□ -1.65
TMA108	YIL137C	SUB2	Q07478	446 aa	Known RBP	4.72	□□□□□ -1.65
TMA108	YIL137C	DOS2	P54858	310 aa		4.72	□□□□□ -1.65
TMA108	YIL137C	GEF1	P37020	779 aa		4.7	□□□□□ -1.66
TMA108	YIL137C	GUA1	P38625	525 aa	Known RBP	4.7	□□□□□ -1.66
TMA108	YIL137C	SSK2	P53599	1579 aa		4.69	□□□□□ -1.66
TMA108	YIL137C	TPO2	P53283	614 aa		4.69	□□□□□ -1.66
TMA108	YIL137C	SPC42	P36094	363 aa		4.68	□□□□□ -1.66
TMA108	YIL137C	OCA5	P38738	679 aa		4.68	□□□□□ -1.66
TMA108	YIL137C	YNR021W	P53723	404 aa	Known RBP	4.68	□□□□□ -1.66
TMA108	YIL137C	SEN54	Q02825	467 aa	Predicted RBP	4.68	□□□□□ -1.66
TMA108	YIL137C	SSA1	P10591	642 aa	Known RBP	4.67	□□□□□ -1.66
TMA108	YIL137C	AIM7	Q12156	149 aa		4.67	□□□□□ -1.66
TMA108	YIL137C	RAM2	P29703	316 aa		4.66	□□□□□ -1.66
TMA108	YIL137C	ESP1	Q03018	1630 aa		4.66	□□□□□ -1.66
TMA108	YIL137C	SPB4	P25808	606 aa	Predicted RBP	4.65	□□□□□ -1.67
TMA108	YIL137C	YTA7	P40340	1379 aa		4.65	□□□□□ -1.67
TMA108	YIL137C	SET1	P38827	1080 aa	Known RBP	4.64	□□□□□ -1.67
TMA108	YIL137C	NUG1	P40010	520 aa	Known RBP	4.64	□□□□□ -1.67
TMA108	YIL137C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms