RNA–Protein interactions for RNA: YDR440W

DOT1, Transcript of Nucleosomal histone H3-Lys79 methylase, yeast

Gene DOT1, Length 1,749 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT1	YDR440W	SGS1	P35187	1447 aa		12.33	□□□□□ -0.44
DOT1	YDR440W	MON2	P48563	1636 aa	Predicted RBP	12.09	□□□□□ -0.47
DOT1	YDR440W	INO80	P53115	1489 aa		12.08	□□□□□ -0.48
DOT1	YDR440W	TCB3	Q03640	1545 aa	Known RBP	12.02	□□□□□ -0.49
DOT1	YDR440W	TY1B-DR4	Q07793	1604 aa		11.93	□□□□□ -0.5
DOT1	YDR440W	SWR1	Q05471	1514 aa		11.78	□□□□□ -0.52
DOT1	YDR440W	HSL1	P34244	1518 aa		11.67	□□□□□ -0.54
DOT1	YDR440W	SSN2	P38931	1420 aa		11.67	□□□□□ -0.54
DOT1	YDR440W	SPT6	P23615	1451 aa	Known RBP	11.63	□□□□□ -0.55
DOT1	YDR440W	SPA2	P23201	1466 aa	Known RBP	11.6	□□□□□ -0.55
DOT1	YDR440W	DNA2	P38859	1522 aa		11.54	□□□□□ -0.56
DOT1	YDR440W	HIR3	P47171	1648 aa		11.45	□□□□□ -0.58
DOT1	YDR440W	KOG1	P38873	1557 aa		11.38	□□□□□ -0.59
DOT1	YDR440W	XRN1	P22147	1528 aa	Known RBP	11.34	□□□□□ -0.59
DOT1	YDR440W	DRS1	P32892	752 aa	Known RBP	11.26	□□□□□ -0.61
DOT1	YDR440W	REV3	P14284	1504 aa		11.16	□□□□□ -0.62
DOT1	YDR440W	ECM5	Q03214	1411 aa		11.14	□□□□□ -0.63
DOT1	YDR440W	BUD4	P47136	1447 aa		11.11	□□□□□ -0.63
DOT1	YDR440W	THO2	P53552	1597 aa	Known RBP	11.09	□□□□□ -0.63
DOT1	YDR440W	TAF2	P23255	1407 aa		11.05	□□□□□ -0.64
DOT1	YDR440W	SIN3	P22579	1536 aa		11.05	□□□□□ -0.64
DOT1	YDR440W	SSK2	P53599	1579 aa		10.99	□□□□□ -0.65
DOT1	YDR440W	ATG2	P53855	1592 aa		10.97	□□□□□ -0.65
DOT1	YDR440W	MDS3	P53094	1487 aa		10.94	□□□□□ -0.66
DOT1	YDR440W	PEP1	P32319	1579 aa		10.94	□□□□□ -0.66
DOT1	YDR440W	SKI3	P17883	1432 aa	Known RBP	10.89	□□□□□ -0.67
DOT1	YDR440W	ESP1	Q03018	1630 aa		10.88	□□□□□ -0.67
DOT1	YDR440W	MYO2	P19524	1574 aa	Known RBP	10.76	□□□□□ -0.69
DOT1	YDR440W	YPK9	Q12697	1472 aa		10.75	□□□□□ -0.69
DOT1	YDR440W	RSE1	Q04693	1361 aa	Known RBP	10.71	□□□□□ -0.69
DOT1	YDR440W	SCC2	Q04002	1493 aa		10.7	□□□□□ -0.7
DOT1	YDR440W	UFD4	P33202	1483 aa		10.65	□□□□□ -0.7
DOT1	YDR440W	RPO31	P04051	1460 aa		10.64	□□□□□ -0.71
DOT1	YDR440W	POL1	P13382	1468 aa		10.64	□□□□□ -0.71
DOT1	YDR440W	STU1	P38198	1513 aa		10.59	□□□□□ -0.71
DOT1	YDR440W	BPT1	P14772	1559 aa		10.58	□□□□□ -0.72
DOT1	YDR440W	YCF1	P39109	1515 aa	Known RBP	10.55	□□□□□ -0.72
DOT1	YDR440W	RKR1	Q04781	1562 aa		10.54	□□□□□ -0.72
DOT1	YDR440W	TOP2	P06786	1428 aa	Known RBP	10.53	□□□□□ -0.72
DOT1	YDR440W	TY2B-LR1	P0C2J3	1770 aa		10.5	□□□□□ -0.73
DOT1	YDR440W	TY2B-F	P0CX63	1770 aa		10.5	□□□□□ -0.73
DOT1	YDR440W	TY2B-GR2	P0CX64	1770 aa		10.5	□□□□□ -0.73
DOT1	YDR440W	TY2B-C	P25384	1770 aa		10.5	□□□□□ -0.73
DOT1	YDR440W	TY2B-DR2	Q03494	1770 aa		10.5	□□□□□ -0.73
DOT1	YDR440W	TY1B-DR1	Q03855	1755 aa		10.5	□□□□□ -0.73
DOT1	YDR440W	TY2B-DR3	Q07791	1770 aa	Known RBP	10.5	□□□□□ -0.73
DOT1	YDR440W	TY2B-OR1	Q12113	1770 aa		10.5	□□□□□ -0.73
DOT1	YDR440W	TY2B-DR1	Q12472	1770 aa		10.5	□□□□□ -0.73
DOT1	YDR440W	TY2B-OR2	Q12501	1770 aa		10.5	□□□□□ -0.73
DOT1	YDR440W	YOR1	P53049	1477 aa		10.49	□□□□□ -0.73
DOT1	YDR440W	SMC4	Q12267	1418 aa		10.44	□□□□□ -0.74
DOT1	YDR440W	MTC1	P47018	478 aa	Known RBP	10.43	□□□□□ -0.74
DOT1	YDR440W	TY1B-DR3	Q99231	1755 aa		10.42	□□□□□ -0.74
DOT1	YDR440W	YTA7	P40340	1379 aa		10.4	□□□□□ -0.74
DOT1	YDR440W	CHD1	P32657	1468 aa		10.4	□□□□□ -0.75
DOT1	YDR440W	TY2B-B	Q12491	1770 aa		10.39	□□□□□ -0.75
DOT1	YDR440W	TY1B-BR	Q12193	1756 aa		10.37	□□□□□ -0.75
DOT1	YDR440W	TY1B-GR3	Q12316	1755 aa		10.37	□□□□□ -0.75
DOT1	YDR440W	TY1B-OR	Q92393	1755 aa		10.37	□□□□□ -0.75
DOT1	YDR440W	CDC25	P04821	1589 aa		10.36	□□□□□ -0.75
DOT1	YDR440W	RQC2	Q12532	1038 aa	Known RBP	10.36	□□□□□ -0.75
DOT1	YDR440W	TY1B-H	O13535	1793 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-DR5	P0C2I2	1755 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-DR6	P0C2I3	1755 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-LR2	P0C2I5	1755 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-PR2	P0C2J0	1756 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-JR1	P47098	1755 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-ML2	Q03434	1755 aa	Known RBP	10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-ER1	Q03612	1755 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-ML1	Q04711	1755 aa	Known RBP	10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-GR2	Q12269	1755 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-OL	Q12273	1755 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	TY1B-PL	Q12414	1755 aa	Known RBP	10.33	□□□□□ -0.76
DOT1	YDR440W	MYO4	P32492	1471 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	MMS22	Q06164	1454 aa		10.33	□□□□□ -0.76
DOT1	YDR440W	PAN1	P32521	1480 aa		10.31	□□□□□ -0.76
DOT1	YDR440W	SPP41	P38904	1435 aa		10.3	□□□□□ -0.76
DOT1	YDR440W	DNF1	P32660	1571 aa		10.29	□□□□□ -0.76
DOT1	YDR440W	SAS10	Q12136	610 aa	Predicted RBP	10.24	□□□□□ -0.77
DOT1	YDR440W	TSC11	P40061	1430 aa		10.23	□□□□□ -0.77
DOT1	YDR440W	SNQ2	P32568	1501 aa	Known RBP	10.21	□□□□□ -0.77
DOT1	YDR440W	VTH1	P40438	1549 aa		10.21	□□□□□ -0.78
DOT1	YDR440W	VTH2	P40890	1549 aa		10.21	□□□□□ -0.78
DOT1	YDR440W	ESC1	Q03661	1658 aa	Known RBP	10.2	□□□□□ -0.78
DOT1	YDR440W	RPA190	P10964	1664 aa	Known RBP	10.18	□□□□□ -0.78
DOT1	YDR440W	STH1	P32597	1359 aa		10.18	□□□□□ -0.78
DOT1	YDR440W	TRM732	Q03496	1420 aa		10.16	□□□□□ -0.78
DOT1	YDR440W	TY1B-JR2	P47100	1755 aa	Known RBP	10.15	□□□□□ -0.78
DOT1	YDR440W	TY1B-ER2	Q03619	1755 aa		10.15	□□□□□ -0.78
DOT1	YDR440W	TY1B-MR1	Q04214	1755 aa		10.15	□□□□□ -0.78
DOT1	YDR440W	TY1B-MR2	Q04670	1755 aa	Known RBP	10.15	□□□□□ -0.78
DOT1	YDR440W	TY1B-LR1	Q12088	1755 aa	Known RBP	10.15	□□□□□ -0.78
DOT1	YDR440W	TY1B-NL1	Q12112	1755 aa		10.15	□□□□□ -0.78
DOT1	YDR440W	TY1B-GR1	Q12141	1755 aa		10.15	□□□□□ -0.78
DOT1	YDR440W	TY1B-BL	Q12490	1755 aa		10.15	□□□□□ -0.78
DOT1	YDR440W	SNT2	P53127	1403 aa		10.12	□□□□□ -0.79
DOT1	YDR440W	PDR15	Q04182	1529 aa	Known RBP	10.09	□□□□□ -0.79

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms