RNA–Protein interactions for RNA: YOR207C

RET1, Transcript of Second-largest subunit of RNA polymerase III, yeastyeast

Gene RET1, Length 3,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET1YOR207C SGS1P35187 1447 aa8.73□□□□□ -1.01
RET1YOR207C SSN2P38931 1420 aa8.56□□□□□ -1.04
RET1YOR207C SPA2P23201 1466 aaKnown RBP8.53□□□□□ -1.04
RET1YOR207C DRS1P32892 752 aaKnown RBP8.37□□□□□ -1.07
RET1YOR207C RSE1Q04693 1361 aaKnown RBP8.16□□□□□ -1.1
RET1YOR207C INO80P53115 1489 aa8.14□□□□□ -1.11
RET1YOR207C NSR1P27476 414 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
RET1YOR207C NOP2P40991 618 aaKnown RBP8.02□□□□□ -1.13
RET1YOR207C SKI3P17883 1432 aaKnown RBP7.99□□□□□ -1.13
RET1YOR207C TCB3Q03640 1545 aaKnown RBP7.94□□□□□ -1.14
RET1YOR207C TAF2P23255 1407 aa7.91□□□□□ -1.14
RET1YOR207C HSL1P34244 1518 aa7.91□□□□□ -1.14
RET1YOR207C SAS10Q12136 610 aaPredicted RBP7.9□□□□□ -1.14
RET1YOR207C XRN1P22147 1528 aaKnown RBP7.9□□□□□ -1.15
RET1YOR207C MMS22Q06164 1454 aa7.89□□□□□ -1.15
RET1YOR207C SPT6P23615 1451 aaKnown RBP7.87□□□□□ -1.15
RET1YOR207C TY1B-DR4Q07793 1604 aa7.86□□□□□ -1.15
RET1YOR207C HIR3P47171 1648 aa7.8□□□□□ -1.16
RET1YOR207C BFR2Q06631 534 aaKnown RBP7.74□□□□□ -1.17
RET1YOR207C REV3P14284 1504 aa7.73□□□□□ -1.17
RET1YOR207C TRM732Q03496 1420 aa7.72□□□□□ -1.17
RET1YOR207C CHD1P32657 1468 aa7.7□□□□□ -1.18
RET1YOR207C BPT1P14772 1559 aa7.7□□□□□ -1.18
RET1YOR207C UFD4P33202 1483 aa7.69□□□□□ -1.18
RET1YOR207C STU1P38198 1513 aa7.67□□□□□ -1.18
RET1YOR207C SSM4P40318 1319 aa7.65□□□□□ -1.19
RET1YOR207C MYO2P19524 1574 aaKnown RBP7.65□□□□□ -1.19
RET1YOR207C SSK2P53599 1579 aa7.63□□□□□ -1.19
RET1YOR207C THO2P53552 1597 aaKnown RBP7.62□□□□□ -1.19
RET1YOR207C SCC2Q04002 1493 aa7.61□□□□□ -1.19
RET1YOR207C SPT7P35177 1332 aa7.6□□□□□ -1.19
RET1YOR207C IKI3Q06706 1349 aaKnown RBP7.6□□□□□ -1.19
RET1YOR207C LEU3P08638 886 aa7.59□□□□□ -1.19
RET1YOR207C MON2P48563 1636 aaPredicted RBP7.59□□□□□ -1.2
RET1YOR207C RTT106P40161 455 aa7.57□□□□□ -1.2
RET1YOR207C IFH1P39520 1085 aa7.57□□□□□ -1.2
RET1YOR207C ESP1Q03018 1630 aa7.55□□□□□ -1.2
RET1YOR207C SWR1Q05471 1514 aa7.55□□□□□ -1.2
RET1YOR207C SIN3P22579 1536 aa7.55□□□□□ -1.2
RET1YOR207C ENP1P38333 483 aaKnown RBP7.53□□□□□ -1.2
RET1YOR207C POL5P39985 1022 aaKnown RBP7.53□□□□□ -1.2
RET1YOR207C POL1P13382 1468 aa7.53□□□□□ -1.2
RET1YOR207C BUD4P47136 1447 aa7.51□□□□□ -1.21
RET1YOR207C YTA7P40340 1379 aa7.51□□□□□ -1.21
RET1YOR207C YPR148CQ06523 435 aa7.49□□□□□ -1.21
RET1YOR207C SPP41P38904 1435 aa7.48□□□□□ -1.21
RET1YOR207C STH1P32597 1359 aa7.46□□□□□ -1.22
RET1YOR207C FUN12P39730 1002 aaKnown RBP7.45□□□□□ -1.22
RET1YOR207C ORC1P54784 914 aaPredicted RBP7.44□□□□□ -1.22
RET1YOR207C TAF7Q05021 590 aa7.44□□□□□ -1.22
RET1YOR207C RKR1Q04781 1562 aa7.43□□□□□ -1.22
RET1YOR207C PRS1P32895 427 aaKnown RBP7.43□□□□□ -1.22
RET1YOR207C DNA2P38859 1522 aa7.41□□□□□ -1.22
RET1YOR207C PDR10P51533 1564 aa7.4□□□□□ -1.23
RET1YOR207C SNQ2P32568 1501 aaKnown RBP7.39□□□□□ -1.23
RET1YOR207C YOR1P53049 1477 aa7.39□□□□□ -1.23
RET1YOR207C PSD2P53037 1138 aaKnown RBP7.39□□□□□ -1.23
RET1YOR207C ECM5Q03214 1411 aa7.38□□□□□ -1.23
RET1YOR207C CFT1Q06632 1357 aaKnown RBP7.38□□□□□ -1.23
RET1YOR207C YPK9Q12697 1472 aa7.37□□□□□ -1.23
RET1YOR207C PAN1P32521 1480 aa7.37□□□□□ -1.23
RET1YOR207C ATG2P53855 1592 aa7.37□□□□□ -1.23
RET1YOR207C YCF1P39109 1515 aaKnown RBP7.37□□□□□ -1.23
RET1YOR207C NUP170P38181 1502 aa7.36□□□□□ -1.23
RET1YOR207C TSC11P40061 1430 aa7.35□□□□□ -1.23
RET1YOR207C GEA1P47102 1408 aaPredicted RBP7.35□□□□□ -1.23
RET1YOR207C PDR15Q04182 1529 aaKnown RBP7.35□□□□□ -1.23
RET1YOR207C CAB3P36076 571 aa7.33□□□□□ -1.24
RET1YOR207C KOG1P38873 1557 aa7.32□□□□□ -1.24
RET1YOR207C EBP2P36049 427 aaKnown RBP7.32□□□□□ -1.24
RET1YOR207C MYO4P32492 1471 aa7.32□□□□□ -1.24
RET1YOR207C RQC2Q12532 1038 aaKnown RBP7.32□□□□□ -1.24
RET1YOR207C MLP2P40457 1679 aa7.31□□□□□ -1.24
RET1YOR207C YFR016CP43597 1233 aaKnown RBP7.28□□□□□ -1.24
RET1YOR207C PEP1P32319 1579 aa7.27□□□□□ -1.24
RET1YOR207C SEC3P33332 1336 aaKnown RBP7.27□□□□□ -1.25
RET1YOR207C TY3B-GQ99315 1547 aa7.27□□□□□ -1.25
RET1YOR207C NST1P53935 1240 aa7.27□□□□□ -1.25
RET1YOR207C TOP2P06786 1428 aaKnown RBP7.26□□□□□ -1.25
RET1YOR207C ULS1Q08562 1619 aa7.25□□□□□ -1.25
RET1YOR207C SMC4Q12267 1418 aa7.25□□□□□ -1.25
RET1YOR207C TY1B-DR3Q99231 1755 aa7.24□□□□□ -1.25
RET1YOR207C VPS15P22219 1454 aa7.24□□□□□ -1.25
RET1YOR207C RPO31P04051 1460 aa7.23□□□□□ -1.25
RET1YOR207C TY2B-LR1P0C2J3 1770 aa7.22□□□□□ -1.25
RET1YOR207C TY2B-FP0CX63 1770 aa7.22□□□□□ -1.25
RET1YOR207C TY2B-GR2P0CX64 1770 aa7.22□□□□□ -1.25
RET1YOR207C TY2B-CP25384 1770 aa7.22□□□□□ -1.25
RET1YOR207C TY2B-DR2Q03494 1770 aa7.22□□□□□ -1.25
RET1YOR207C TY1B-DR1Q03855 1755 aa7.22□□□□□ -1.25
RET1YOR207C TY2B-DR3Q07791 1770 aaKnown RBP7.22□□□□□ -1.25
RET1YOR207C TY2B-OR1Q12113 1770 aa7.22□□□□□ -1.25
RET1YOR207C TY2B-DR1Q12472 1770 aa7.22□□□□□ -1.25
RET1YOR207C TY2B-OR2Q12501 1770 aa7.22□□□□□ -1.25
RET1YOR207C DNF1P32660 1571 aa7.2□□□□□ -1.26
RET1YOR207C IME2P32581 645 aa7.2□□□□□ -1.26
RET1YOR207C SRB8P25648 1427 aa7.18□□□□□ -1.26
RET1YOR207C RPC31P17890 251 aa7.18□□□□□ -1.26
RET1YOR207C TY2B-BQ12491 1770 aa7.17□□□□□ -1.26
RET1YOR207C OPY1P38271 328 aa7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms