RNA–Protein interactions for RNA: YBL008W

HIR1, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR1, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR1YBL008W SGS1P35187 1447 aa9.39□□□□□ -0.91
HIR1YBL008W SSN2P38931 1420 aa9.1□□□□□ -0.95
HIR1YBL008W SPA2P23201 1466 aaKnown RBP9.01□□□□□ -0.97
HIR1YBL008W DRS1P32892 752 aaKnown RBP8.99□□□□□ -0.97
HIR1YBL008W INO80P53115 1489 aa8.79□□□□□ -1
HIR1YBL008W TCB3Q03640 1545 aaKnown RBP8.62□□□□□ -1.03
HIR1YBL008W RSE1Q04693 1361 aaKnown RBP8.58□□□□□ -1.04
HIR1YBL008W TAF2P23255 1407 aa8.53□□□□□ -1.04
HIR1YBL008W SPT6P23615 1451 aaKnown RBP8.52□□□□□ -1.05
HIR1YBL008W HSL1P34244 1518 aa8.52□□□□□ -1.05
HIR1YBL008W XRN1P22147 1528 aaKnown RBP8.51□□□□□ -1.05
HIR1YBL008W TY1B-DR4Q07793 1604 aa8.49□□□□□ -1.05
HIR1YBL008W SAS10Q12136 610 aaPredicted RBP8.47□□□□□ -1.05
HIR1YBL008W HIR3P47171 1648 aa8.41□□□□□ -1.06
HIR1YBL008W SKI3P17883 1432 aaKnown RBP8.32□□□□□ -1.08
HIR1YBL008W NSR1P27476 414 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
HIR1YBL008W MMS22Q06164 1454 aa8.31□□□□□ -1.08
HIR1YBL008W REV3P14284 1504 aa8.3□□□□□ -1.08
HIR1YBL008W SWR1Q05471 1514 aa8.25□□□□□ -1.09
HIR1YBL008W STU1P38198 1513 aa8.19□□□□□ -1.1
HIR1YBL008W NOP2P40991 618 aaKnown RBP8.18□□□□□ -1.1
HIR1YBL008W BPT1P14772 1559 aa8.16□□□□□ -1.1
HIR1YBL008W MON2P48563 1636 aaPredicted RBP8.15□□□□□ -1.1
HIR1YBL008W THO2P53552 1597 aaKnown RBP8.15□□□□□ -1.1
HIR1YBL008W SSK2P53599 1579 aa8.15□□□□□ -1.1
HIR1YBL008W IFH1P39520 1085 aa8.14□□□□□ -1.11
HIR1YBL008W TRM732Q03496 1420 aa8.12□□□□□ -1.11
HIR1YBL008W CHD1P32657 1468 aa8.11□□□□□ -1.11
HIR1YBL008W ESP1Q03018 1630 aa8.09□□□□□ -1.11
HIR1YBL008W SIN3P22579 1536 aa8.08□□□□□ -1.12
HIR1YBL008W SCC2Q04002 1493 aa8.07□□□□□ -1.12
HIR1YBL008W MYO2P19524 1574 aaKnown RBP8.07□□□□□ -1.12
HIR1YBL008W SSM4P40318 1319 aa8.07□□□□□ -1.12
HIR1YBL008W ECM5Q03214 1411 aa8.06□□□□□ -1.12
HIR1YBL008W YTA7P40340 1379 aa8.06□□□□□ -1.12
HIR1YBL008W IKI3Q06706 1349 aaKnown RBP8.05□□□□□ -1.12
HIR1YBL008W POL1P13382 1468 aa8.04□□□□□ -1.12
HIR1YBL008W UFD4P33202 1483 aa8.03□□□□□ -1.12
HIR1YBL008W RTT106P40161 455 aa8.02□□□□□ -1.12
HIR1YBL008W RQC2Q12532 1038 aaKnown RBP8.02□□□□□ -1.12
HIR1YBL008W STH1P32597 1359 aa8.01□□□□□ -1.13
HIR1YBL008W BUD4P47136 1447 aa7.99□□□□□ -1.13
HIR1YBL008W DNA2P38859 1522 aa7.97□□□□□ -1.13
HIR1YBL008W LEU3P08638 886 aa7.97□□□□□ -1.13
HIR1YBL008W RKR1Q04781 1562 aa7.95□□□□□ -1.14
HIR1YBL008W ATG2P53855 1592 aa7.94□□□□□ -1.14
HIR1YBL008W POL5P39985 1022 aaKnown RBP7.94□□□□□ -1.14
HIR1YBL008W YPK9Q12697 1472 aa7.93□□□□□ -1.14
HIR1YBL008W SPT7P35177 1332 aa7.92□□□□□ -1.14
HIR1YBL008W ORC1P54784 914 aaPredicted RBP7.91□□□□□ -1.14
HIR1YBL008W YOR1P53049 1477 aa7.9□□□□□ -1.14
HIR1YBL008W TAF7Q05021 590 aa7.89□□□□□ -1.15
HIR1YBL008W SNQ2P32568 1501 aaKnown RBP7.87□□□□□ -1.15
HIR1YBL008W GEA1P47102 1408 aaPredicted RBP7.84□□□□□ -1.15
HIR1YBL008W ENP1P38333 483 aaKnown RBP7.84□□□□□ -1.15
HIR1YBL008W SPP41P38904 1435 aa7.84□□□□□ -1.15
HIR1YBL008W TOP2P06786 1428 aaKnown RBP7.83□□□□□ -1.16
HIR1YBL008W PAN1P32521 1480 aa7.83□□□□□ -1.16
HIR1YBL008W MYO4P32492 1471 aa7.82□□□□□ -1.16
HIR1YBL008W PDR15Q04182 1529 aaKnown RBP7.82□□□□□ -1.16
HIR1YBL008W TSC11P40061 1430 aa7.82□□□□□ -1.16
HIR1YBL008W KOG1P38873 1557 aa7.81□□□□□ -1.16
HIR1YBL008W RPO31P04051 1460 aa7.8□□□□□ -1.16
HIR1YBL008W PEP1P32319 1579 aa7.8□□□□□ -1.16
HIR1YBL008W MDS3P53094 1487 aa7.79□□□□□ -1.16
HIR1YBL008W SMC4Q12267 1418 aa7.78□□□□□ -1.16
HIR1YBL008W YCF1P39109 1515 aaKnown RBP7.77□□□□□ -1.17
HIR1YBL008W FUN12P39730 1002 aaKnown RBP7.77□□□□□ -1.17
HIR1YBL008W MLP2P40457 1679 aa7.76□□□□□ -1.17
HIR1YBL008W PSD2P53037 1138 aaKnown RBP7.76□□□□□ -1.17
HIR1YBL008W TY2B-LR1P0C2J3 1770 aa7.74□□□□□ -1.17
HIR1YBL008W TY2B-FP0CX63 1770 aa7.74□□□□□ -1.17
HIR1YBL008W TY2B-GR2P0CX64 1770 aa7.74□□□□□ -1.17
HIR1YBL008W TY2B-CP25384 1770 aa7.74□□□□□ -1.17
HIR1YBL008W TY2B-DR2Q03494 1770 aa7.74□□□□□ -1.17
HIR1YBL008W TY1B-DR1Q03855 1755 aa7.74□□□□□ -1.17
HIR1YBL008W TY2B-DR3Q07791 1770 aaKnown RBP7.74□□□□□ -1.17
HIR1YBL008W TY2B-OR1Q12113 1770 aa7.74□□□□□ -1.17
HIR1YBL008W TY2B-DR1Q12472 1770 aa7.74□□□□□ -1.17
HIR1YBL008W TY2B-OR2Q12501 1770 aa7.74□□□□□ -1.17
HIR1YBL008W CKB1P43639 278 aa7.74□□□□□ -1.17
HIR1YBL008W TY1B-DR3Q99231 1755 aa7.73□□□□□ -1.17
HIR1YBL008W PRS1P32895 427 aaKnown RBP7.72□□□□□ -1.17
HIR1YBL008W NUP170P38181 1502 aa7.71□□□□□ -1.17
HIR1YBL008W VPS15P22219 1454 aa7.7□□□□□ -1.18
HIR1YBL008W TY3B-GQ99315 1547 aa7.68□□□□□ -1.18
HIR1YBL008W ULS1Q08562 1619 aa7.68□□□□□ -1.18
HIR1YBL008W TY2B-BQ12491 1770 aa7.68□□□□□ -1.18
HIR1YBL008W PDR10P51533 1564 aa7.67□□□□□ -1.18
HIR1YBL008W SEC3P33332 1336 aaKnown RBP7.63□□□□□ -1.19
HIR1YBL008W NST1P53935 1240 aa7.62□□□□□ -1.19
HIR1YBL008W NOP7P53261 605 aaKnown RBP7.62□□□□□ -1.19
HIR1YBL008W CFT1Q06632 1357 aaKnown RBP7.62□□□□□ -1.19
HIR1YBL008W DNF1P32660 1571 aa7.61□□□□□ -1.19
HIR1YBL008W BFR2Q06631 534 aaKnown RBP7.6□□□□□ -1.19
HIR1YBL008W VTH1P40438 1549 aa7.59□□□□□ -1.19
HIR1YBL008W VTH2P40890 1549 aa7.59□□□□□ -1.19
HIR1YBL008W GDB1Q06625 1536 aa7.59□□□□□ -1.19
HIR1YBL008W BUD21Q08492 214 aaPredicted RBP7.58□□□□□ -1.2
HIR1YBL008W MTC1P47018 478 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms