RNA–Protein interactions for RNA: YCR012W

PGK1, Transcript of 3-phosphoglycerate kinase, yeastyeast

Gene PGK1, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGK1YCR012W INO80P53115 1489 aa10.59□□□□□ -0.71
PGK1YCR012W MON2P48563 1636 aaPredicted RBP10.43□□□□□ -0.74
PGK1YCR012W SGS1P35187 1447 aa10.19□□□□□ -0.78
PGK1YCR012W DNA2P38859 1522 aa10□□□□□ -0.81
PGK1YCR012W SPA2P23201 1466 aaKnown RBP9.95□□□□□ -0.82
PGK1YCR012W SWR1Q05471 1514 aa9.92□□□□□ -0.82
PGK1YCR012W TCB3Q03640 1545 aaKnown RBP9.86□□□□□ -0.83
PGK1YCR012W SSN2P38931 1420 aa9.85□□□□□ -0.83
PGK1YCR012W KOG1P38873 1557 aa9.84□□□□□ -0.83
PGK1YCR012W RSE1Q04693 1361 aaKnown RBP9.84□□□□□ -0.83
PGK1YCR012W TY1B-DR4Q07793 1604 aa9.7□□□□□ -0.86
PGK1YCR012W DRS1P32892 752 aaKnown RBP9.6□□□□□ -0.87
PGK1YCR012W SPT6P23615 1451 aaKnown RBP9.45□□□□□ -0.9
PGK1YCR012W HSL1P34244 1518 aa9.41□□□□□ -0.9
PGK1YCR012W MTC1P47018 478 aaKnown RBP9.39□□□□□ -0.91
PGK1YCR012W ECM5Q03214 1411 aa9.37□□□□□ -0.91
PGK1YCR012W HIR3P47171 1648 aa9.26□□□□□ -0.93
PGK1YCR012W BUD4P47136 1447 aa9.24□□□□□ -0.93
PGK1YCR012W XRN1P22147 1528 aaKnown RBP9.24□□□□□ -0.93
PGK1YCR012W THO2P53552 1597 aaKnown RBP9.17□□□□□ -0.94
PGK1YCR012W REV3P14284 1504 aa9.13□□□□□ -0.95
PGK1YCR012W SKI3P17883 1432 aaKnown RBP9.12□□□□□ -0.95
PGK1YCR012W MDS3P53094 1487 aa9.1□□□□□ -0.95
PGK1YCR012W SIN3P22579 1536 aa9.08□□□□□ -0.96
PGK1YCR012W SSK2P53599 1579 aa9.03□□□□□ -0.96
PGK1YCR012W TAF2P23255 1407 aa9.02□□□□□ -0.97
PGK1YCR012W CHD1P32657 1468 aa9.01□□□□□ -0.97
PGK1YCR012W MMS22Q06164 1454 aa8.97□□□□□ -0.97
PGK1YCR012W MYO2P19524 1574 aaKnown RBP8.95□□□□□ -0.98
PGK1YCR012W PEP1P32319 1579 aa8.95□□□□□ -0.98
PGK1YCR012W ESP1Q03018 1630 aa8.94□□□□□ -0.98
PGK1YCR012W BPT1P14772 1559 aa8.9□□□□□ -0.98
PGK1YCR012W POL1P13382 1468 aa8.87□□□□□ -0.99
PGK1YCR012W ATG2P53855 1592 aa8.86□□□□□ -0.99
PGK1YCR012W STU1P38198 1513 aa8.85□□□□□ -0.99
PGK1YCR012W YTA7P40340 1379 aa8.84□□□□□ -0.99
PGK1YCR012W YPK9Q12697 1472 aa8.81□□□□□ -1
PGK1YCR012W SAS10Q12136 610 aaPredicted RBP8.76□□□□□ -1.01
PGK1YCR012W YCF1P39109 1515 aaKnown RBP8.74□□□□□ -1.01
PGK1YCR012W RKR1Q04781 1562 aa8.73□□□□□ -1.01
PGK1YCR012W YOR1P53049 1477 aa8.71□□□□□ -1.01
PGK1YCR012W MYO4P32492 1471 aa8.7□□□□□ -1.02
PGK1YCR012W SCC2Q04002 1493 aa8.7□□□□□ -1.02
PGK1YCR012W MIF2P35201 549 aa8.69□□□□□ -1.02
PGK1YCR012W UFD4P33202 1483 aa8.68□□□□□ -1.02
PGK1YCR012W RPO31P04051 1460 aa8.66□□□□□ -1.02
PGK1YCR012W TRM732Q03496 1420 aa8.66□□□□□ -1.02
PGK1YCR012W RQC2Q12532 1038 aaKnown RBP8.65□□□□□ -1.02
PGK1YCR012W SMC4Q12267 1418 aa8.64□□□□□ -1.03
PGK1YCR012W TAF7Q05021 590 aa8.64□□□□□ -1.03
PGK1YCR012W TOP2P06786 1428 aaKnown RBP8.63□□□□□ -1.03
PGK1YCR012W IKI3Q06706 1349 aaKnown RBP8.63□□□□□ -1.03
PGK1YCR012W MET5P47169 1442 aa8.58□□□□□ -1.04
PGK1YCR012W SNQ2P32568 1501 aaKnown RBP8.58□□□□□ -1.04
PGK1YCR012W STH1P32597 1359 aa8.58□□□□□ -1.04
PGK1YCR012W LTE1P07866 1435 aa8.53□□□□□ -1.04
PGK1YCR012W TY2B-LR1P0C2J3 1770 aa8.51□□□□□ -1.05
PGK1YCR012W TY2B-FP0CX63 1770 aa8.51□□□□□ -1.05
PGK1YCR012W TY2B-GR2P0CX64 1770 aa8.51□□□□□ -1.05
PGK1YCR012W TY2B-CP25384 1770 aa8.51□□□□□ -1.05
PGK1YCR012W TY2B-DR2Q03494 1770 aa8.51□□□□□ -1.05
PGK1YCR012W TY1B-DR1Q03855 1755 aa8.51□□□□□ -1.05
PGK1YCR012W TY2B-DR3Q07791 1770 aaKnown RBP8.51□□□□□ -1.05
PGK1YCR012W TY2B-OR1Q12113 1770 aa8.51□□□□□ -1.05
PGK1YCR012W TY2B-DR1Q12472 1770 aa8.51□□□□□ -1.05
PGK1YCR012W TY2B-OR2Q12501 1770 aa8.51□□□□□ -1.05
PGK1YCR012W SPP41P38904 1435 aa8.51□□□□□ -1.05
PGK1YCR012W TY1B-DR3Q99231 1755 aa8.5□□□□□ -1.05
PGK1YCR012W NUP170P38181 1502 aa8.49□□□□□ -1.05
PGK1YCR012W IFH1P39520 1085 aa8.49□□□□□ -1.05
PGK1YCR012W MLP2P40457 1679 aa8.49□□□□□ -1.05
PGK1YCR012W PDR15Q04182 1529 aaKnown RBP8.48□□□□□ -1.05
PGK1YCR012W SSM4P40318 1319 aa8.48□□□□□ -1.05
PGK1YCR012W CDC25P04821 1589 aa8.48□□□□□ -1.05
PGK1YCR012W ABP1P15891 592 aaKnown RBP8.47□□□□□ -1.05
PGK1YCR012W GEA1P47102 1408 aaPredicted RBP8.46□□□□□ -1.05
PGK1YCR012W PAN1P32521 1480 aa8.45□□□□□ -1.06
PGK1YCR012W TY2B-BQ12491 1770 aa8.45□□□□□ -1.06
PGK1YCR012W DNF1P32660 1571 aa8.44□□□□□ -1.06
PGK1YCR012W ITT1Q04638 464 aa8.44□□□□□ -1.06
PGK1YCR012W ULS1Q08562 1619 aa8.41□□□□□ -1.06
PGK1YCR012W GEA2P39993 1459 aaKnown RBP8.4□□□□□ -1.06
PGK1YCR012W TSC11P40061 1430 aa8.4□□□□□ -1.06
PGK1YCR012W ESC1Q03661 1658 aaKnown RBP8.37□□□□□ -1.07
PGK1YCR012W YFR006WP43590 535 aa8.37□□□□□ -1.07
PGK1YCR012W VTH1P40438 1549 aa8.37□□□□□ -1.07
PGK1YCR012W VTH2P40890 1549 aa8.37□□□□□ -1.07
PGK1YCR012W TY1B-HO13535 1793 aa8.37□□□□□ -1.07
PGK1YCR012W TY1B-DR5P0C2I2 1755 aa8.37□□□□□ -1.07
PGK1YCR012W TY1B-DR6P0C2I3 1755 aa8.37□□□□□ -1.07
PGK1YCR012W TY1B-LR2P0C2I5 1755 aa8.37□□□□□ -1.07
PGK1YCR012W TY1B-LR3P0C2I6 1755 aaKnown RBP8.37□□□□□ -1.07
PGK1YCR012W TY1B-PR1P0C2I9 1755 aaKnown RBP8.37□□□□□ -1.07
PGK1YCR012W TY1B-PR2P0C2J0 1756 aa8.37□□□□□ -1.07
PGK1YCR012W TY1B-PR3P0C2J1 1755 aaKnown RBP8.37□□□□□ -1.07
PGK1YCR012W TY1B-JR1P47098 1755 aa8.37□□□□□ -1.07
PGK1YCR012W TY1B-ML2Q03434 1755 aaKnown RBP8.37□□□□□ -1.07
PGK1YCR012W TY1B-ER1Q03612 1755 aa8.37□□□□□ -1.07
PGK1YCR012W TY1B-ML1Q04711 1755 aaKnown RBP8.37□□□□□ -1.07
PGK1YCR012W TY1B-GR2Q12269 1755 aa8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms