RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	DRS1	P32892	752 aa	Known RBP	7.93	□□□□□ -1.14
NUP82	YJL061W	MTC1	P47018	478 aa	Known RBP	7.91	□□□□□ -1.14
NUP82	YJL061W	BFR2	Q06631	534 aa	Known RBP	6.85	□□□□□ -1.31
NUP82	YJL061W	DIP2	Q12220	943 aa	Predicted RBP	6.75	□□□□□ -1.33
NUP82	YJL061W	AVT3	P36062	692 aa		6.64	□□□□□ -1.35
NUP82	YJL061W	FAP1	P53971	965 aa		6.54	□□□□□ -1.36
NUP82	YJL061W	ISW2	Q08773	1120 aa		6.47	□□□□□ -1.37
NUP82	YJL061W	TFA1	P36100	482 aa		6.41	□□□□□ -1.38
NUP82	YJL061W	RSE1	Q04693	1361 aa	Known RBP	6.4	□□□□□ -1.39
NUP82	YJL061W	PRI1	P10363	409 aa		6.37	□□□□□ -1.39
NUP82	YJL061W	RPG1	P38249	964 aa	Known RBP	6.36	□□□□□ -1.39
NUP82	YJL061W	AAD16	Q02895	342 aa		6.28	□□□□□ -1.4
NUP82	YJL061W	RPL17A	P05740	184 aa	Known RBP	6.15	□□□□□ -1.42
NUP82	YJL061W	RPL17B	P46990	184 aa	Known RBP	6.15	□□□□□ -1.42
NUP82	YJL061W	PRY3	P47033	881 aa		6.11	□□□□□ -1.43
NUP82	YJL061W	REB1	P21538	810 aa		6.09	□□□□□ -1.43
NUP82	YJL061W	TSR3	Q12094	313 aa	Known RBP	6.04	□□□□□ -1.44
NUP82	YJL061W	SPT21	P35209	758 aa		5.9	□□□□□ -1.47
NUP82	YJL061W	MRPL32	P25348	183 aa		5.84	□□□□□ -1.47
NUP82	YJL061W	RIM101	P33400	625 aa		5.82	□□□□□ -1.48
NUP82	YJL061W	HAA1	Q12753	694 aa	Known RBP	5.79	□□□□□ -1.48
NUP82	YJL061W	YCK3	P39962	524 aa		5.72	□□□□□ -1.49
NUP82	YJL061W	YKR023W	P36119	530 aa	Known RBP	5.71	□□□□□ -1.5
NUP82	YJL061W	OXP1	P28273	1286 aa		5.62	□□□□□ -1.51
NUP82	YJL061W	TFC8	Q12308	588 aa		5.61	□□□□□ -1.51
NUP82	YJL061W	PTP3	P40048	928 aa		5.6	□□□□□ -1.51
NUP82	YJL061W	HO	P09932	586 aa		5.6	□□□□□ -1.51
NUP82	YJL061W	CDC27	P38042	758 aa		5.59	□□□□□ -1.51
NUP82	YJL061W	YIL055C	P40523	627 aa	Known RBP	5.59	□□□□□ -1.51
NUP82	YJL061W	SSP1	P38871	571 aa		5.56	□□□□□ -1.52
NUP82	YJL061W	YAH1	Q12184	172 aa	Known RBP	5.56	□□□□□ -1.52
NUP82	YJL061W	DCD1	P06773	312 aa		5.54	□□□□□ -1.52
NUP82	YJL061W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.51	□□□□□ -1.53	not detected
NUP82	YJL061W	RSM7	P47150	247 aa		5.49	□□□□□ -1.53
NUP82	YJL061W	YLR271W	Q06152	274 aa		5.47	□□□□□ -1.53
NUP82	YJL061W	RQC2	Q12532	1038 aa	Known RBP	5.47	□□□□□ -1.53
NUP82	YJL061W	YGL015C	P33199	130 aa		5.45	□□□□□ -1.54
NUP82	YJL061W	BCH2	P36122	765 aa		5.44	□□□□□ -1.54
NUP82	YJL061W	UBP10	P53874	792 aa	Predicted RBP	5.42	□□□□□ -1.54
NUP82	YJL061W	AI2	P03876	854 aa		5.39	□□□□□ -1.55
NUP82	YJL061W	BBC1	P47068	1157 aa		5.39	□□□□□ -1.55
NUP82	YJL061W	MAP2	P38174	421 aa	Known RBP	5.38	□□□□□ -1.55
NUP82	YJL061W	MGA2	P40578	1113 aa		5.38	□□□□□ -1.55
NUP82	YJL061W	SCY1	P53009	804 aa		5.36	□□□□□ -1.55
NUP82	YJL061W	EPS1	P40557	701 aa		5.36	□□□□□ -1.55
NUP82	YJL061W	PSD2	P53037	1138 aa	Known RBP	5.34	□□□□□ -1.55
NUP82	YJL061W	BDF1	P35817	686 aa		5.31	□□□□□ -1.56
NUP82	YJL061W	CST9	Q06032	482 aa		5.29	□□□□□ -1.56
NUP82	YJL061W	SLX5	P32828	619 aa	Known RBP	5.29	□□□□□ -1.56
NUP82	YJL061W	DMA1	P38823	416 aa		5.26	□□□□□ -1.57
NUP82	YJL061W	MRM1	P25270	412 aa		5.22	□□□□□ -1.57
NUP82	YJL061W	TIF4632	P39936	914 aa	Known RBP	5.21	□□□□□ -1.58
NUP82	YJL061W	RTG3	P38165	486 aa		5.17	□□□□□ -1.58
NUP82	YJL061W	TGL3	P40308	642 aa		5.15	□□□□□ -1.59
NUP82	YJL061W	RCR1	P38212	213 aa		5.11	□□□□□ -1.59
NUP82	YJL061W	RAM2	P29703	316 aa		5.11	□□□□□ -1.59
NUP82	YJL061W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
NUP82	YJL061W	VPS29	P38759	282 aa		5.08	□□□□□ -1.6
NUP82	YJL061W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
NUP82	YJL061W	YAP5	P40574	245 aa		5.06	□□□□□ -1.6
NUP82	YJL061W	MAK11	P20484	414 aa	Known RBP	5.06	□□□□□ -1.6
NUP82	YJL061W	YOR238W	Q08634	303 aa		5.05	□□□□□ -1.6
NUP82	YJL061W	DBP1	P24784	617 aa	Known RBP	5.02	□□□□□ -1.61
NUP82	YJL061W	STS1	P38637	319 aa		5.01	□□□□□ -1.61
NUP82	YJL061W	SET1	P38827	1080 aa	Known RBP	5.01	□□□□□ -1.61
NUP82	YJL061W	YFR006W	P43590	535 aa		5	□□□□□ -1.61
NUP82	YJL061W	SAS10	Q12136	610 aa	Predicted RBP	5	□□□□□ -1.61
NUP82	YJL061W	MST1	P07236	462 aa		4.98	□□□□□ -1.61
NUP82	YJL061W	COQ8	P27697	501 aa		4.98	□□□□□ -1.61
NUP82	YJL061W	PIB1	Q06651	286 aa		4.98	□□□□□ -1.61
NUP82	YJL061W	IFH1	P39520	1085 aa		4.97	□□□□□ -1.61
NUP82	YJL061W	MIF2	P35201	549 aa		4.97	□□□□□ -1.61
NUP82	YJL061W	GTT3	P39996	337 aa		4.96	□□□□□ -1.62
NUP82	YJL061W	NOP53	Q12080	455 aa	Known RBP	4.96	□□□□□ -1.62
NUP82	YJL061W	VMA1	P17255	1071 aa	Known RBP	4.94	□□□□□ -1.62
NUP82	YJL061W	YPR148C	Q06523	435 aa		4.93	□□□□□ -1.62
NUP82	YJL061W	EDS1	P38073	919 aa		4.93	□□□□□ -1.62
NUP82	YJL061W	VPS70	P47161	811 aa		4.91	□□□□□ -1.62
NUP82	YJL061W	PTC3	P34221	468 aa	Known RBP	4.9	□□□□□ -1.62
NUP82	YJL061W	CKB1	P43639	278 aa		4.9	□□□□□ -1.63
NUP82	YJL061W	SAM3	Q08986	587 aa		4.9	□□□□□ -1.63
NUP82	YJL061W	GRE2	Q12068	342 aa	Known RBP	4.87	□□□□□ -1.63
NUP82	YJL061W	ATH1	P48016	1211 aa		4.87	□□□□□ -1.63
NUP82	YJL061W	UBP9	P39967	754 aa		4.86	□□□□□ -1.63
NUP82	YJL061W	GYP5	Q12344	894 aa		4.86	□□□□□ -1.63
NUP82	YJL061W	ABP1	P15891	592 aa	Known RBP	4.85	□□□□□ -1.63
NUP82	YJL061W	GUT1	P32190	709 aa		4.85	□□□□□ -1.63
NUP82	YJL061W	YOL036W	Q08206	761 aa		4.85	□□□□□ -1.63
NUP82	YJL061W	MSB4	Q12317	492 aa		4.85	□□□□□ -1.63
NUP82	YJL061W	WSC3	Q12215	556 aa		4.84	□□□□□ -1.63
NUP82	YJL061W	LEU3	P08638	886 aa		4.83	□□□□□ -1.64
NUP82	YJL061W	SPB4	P25808	606 aa	Predicted RBP	4.83	□□□□□ -1.64
NUP82	YJL061W	SET4	P42948	560 aa		4.82	□□□□□ -1.64
NUP82	YJL061W	REF2	P42073	533 aa	Predicted RBP	4.81	□□□□□ -1.64
NUP82	YJL061W	YBL029C-A	Q3E756	94 aa		4.81	□□□□□ -1.64
NUP82	YJL061W	EAP1	P36041	632 aa	Known RBP	4.81	□□□□□ -1.64
NUP82	YJL061W	HTA1	P04911	132 aa	Known RBP	4.8	□□□□□ -1.64
NUP82	YJL061W	HTA2	P04912	132 aa		4.8	□□□□□ -1.64
NUP82	YJL061W	DCW1	P36091	449 aa		4.8	□□□□□ -1.64
NUP82	YJL061W	PBS2	P08018	668 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms