RNA–Protein interactions for RNA: YLR390W-A

CCW14, Transcript of Covalently linked cell wall glycoprotein, yeastyeast

Gene CCW14, Length 717 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCW14YLR390W-A MTC1P47018 478 aaKnown RBP8.51□□□□□ -1.05
CCW14YLR390W-A DRS1P32892 752 aaKnown RBP8.16□□□□□ -1.1
CCW14YLR390W-A FAP1P53971 965 aa8.04□□□□□ -1.12
CCW14YLR390W-A PRY3P47033 881 aa7.58□□□□□ -1.2
CCW14YLR390W-A PRI1P10363 409 aa7.34□□□□□ -1.23
CCW14YLR390W-A AAD16Q02895 342 aa7.34□□□□□ -1.23
CCW14YLR390W-A YCK3P39962 524 aa7.17□□□□□ -1.26
CCW14YLR390W-A HAA1Q12753 694 aaKnown RBP7.1□□□□□ -1.27
CCW14YLR390W-A ISW2Q08773 1120 aa7.06□□□□□ -1.28
CCW14YLR390W-A DIP2Q12220 943 aaPredicted RBP7.05□□□□□ -1.28
CCW14YLR390W-A RPG1P38249 964 aaKnown RBP6.99□□□□□ -1.29
CCW14YLR390W-A BFR2Q06631 534 aaKnown RBP6.92□□□□□ -1.3
CCW14YLR390W-A TSR3Q12094 313 aaKnown RBP6.9□□□□□ -1.3
CCW14YLR390W-A AVT3P36062 692 aa6.87□□□□□ -1.31
CCW14YLR390W-A RSE1Q04693 1361 aaKnown RBP6.76□□□□□ -1.33
CCW14YLR390W-A INO80P53115 1489 aa6.72□□□□□ -1.33
CCW14YLR390W-A MRPL32P25348 183 aa6.63□□□□□ -1.35
CCW14YLR390W-A MON2P48563 1636 aaPredicted RBP6.61□□□□□ -1.35
CCW14YLR390W-A RPL17AP05740 184 aaKnown RBP6.55□□□□□ -1.36
CCW14YLR390W-A RPL17BP46990 184 aaKnown RBP6.55□□□□□ -1.36
CCW14YLR390W-A REB1P21538 810 aa6.51□□□□□ -1.37
CCW14YLR390W-A YGL015CP33199 130 aa6.47□□□□□ -1.37
CCW14YLR390W-A DNA2P38859 1522 aa6.32□□□□□ -1.4
CCW14YLR390W-A TFA1P36100 482 aa6.3□□□□□ -1.4
CCW14YLR390W-A SPT21P35209 758 aa6.27□□□□□ -1.41
CCW14YLR390W-A CDC27P38042 758 aa6.23□□□□□ -1.41
CCW14YLR390W-A YKR023WP36119 530 aaKnown RBP6.17□□□□□ -1.42
CCW14YLR390W-A KOG1P38873 1557 aa6.15□□□□□ -1.42
CCW14YLR390W-A BUD31P25337 157 aaPredicted RBP6.15□□□□□ -1.42
CCW14YLR390W-A UBP10P53874 792 aaPredicted RBP6.13□□□□□ -1.43
CCW14YLR390W-A SPA2P23201 1466 aaKnown RBP6.13□□□□□ -1.43
CCW14YLR390W-A MIF2P35201 549 aa6.11□□□□□ -1.43
CCW14YLR390W-A RIM101P33400 625 aa6.09□□□□□ -1.43
CCW14YLR390W-A MAP2P38174 421 aaKnown RBP6.09□□□□□ -1.43
CCW14YLR390W-A HOP09932 586 aa6.06□□□□□ -1.44
CCW14YLR390W-A TFC8Q12308 588 aa6.05□□□□□ -1.44
CCW14YLR390W-A DCD1P06773 312 aa6.03□□□□□ -1.44
CCW14YLR390W-A SWR1Q05471 1514 aa5.98□□□□□ -1.45
CCW14YLR390W-A OXP1P28273 1286 aa5.89□□□□□ -1.47
CCW14YLR390W-A SCY1P53009 804 aa5.89□□□□□ -1.47
CCW14YLR390W-A TIF4632P39936 914 aaKnown RBP5.87□□□□□ -1.47
CCW14YLR390W-A BCH2P36122 765 aa5.86□□□□□ -1.47
CCW14YLR390W-A SLX5P32828 619 aaKnown RBP5.84□□□□□ -1.47
CCW14YLR390W-A TGL3P40308 642 aa5.84□□□□□ -1.47
CCW14YLR390W-A YFR006WP43590 535 aa5.83□□□□□ -1.48
CCW14YLR390W-A YIL055CP40523 627 aaKnown RBP5.81□□□□□ -1.48
CCW14YLR390W-A SIS1P25294 352 aaKnown RBP5.8□□□□□ -1.48
CCW14YLR390W-A UBP9P39967 754 aa5.8□□□□□ -1.48
CCW14YLR390W-A PTP3P40048 928 aa5.8□□□□□ -1.48
CCW14YLR390W-A YAH1Q12184 172 aaKnown RBP5.77□□□□□ -1.49
CCW14YLR390W-A EPS1P40557 701 aa5.72□□□□□ -1.49
CCW14YLR390W-A RSM7P47150 247 aa5.72□□□□□ -1.49
CCW14YLR390W-A BDF1P35817 686 aa5.69□□□□□ -1.5
CCW14YLR390W-A SSP1P38871 571 aa5.68□□□□□ -1.5
CCW14YLR390W-A YLR271WQ06152 274 aa5.67□□□□□ -1.5
CCW14YLR390W-A AI2P03876 854 aa5.65□□□□□ -1.5
CCW14YLR390W-A BBC1P47068 1157 aa5.64□□□□□ -1.51
CCW14YLR390W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
CCW14YLR390W-A MST1P07236 462 aa5.56□□□□□ -1.52
CCW14YLR390W-A PSD2P53037 1138 aaKnown RBP5.56□□□□□ -1.52
CCW14YLR390W-A TY1B-DR4Q07793 1604 aa5.56□□□□□ -1.52
CCW14YLR390W-A TCB3Q03640 1545 aaKnown RBP5.54□□□□□ -1.52
CCW14YLR390W-A YBL029C-AQ3E756 94 aa5.53□□□□□ -1.52
CCW14YLR390W-A ECM5Q03214 1411 aa5.51□□□□□ -1.53
CCW14YLR390W-A ABP1P15891 592 aaKnown RBP5.51□□□□□ -1.53
CCW14YLR390W-A MGA2P40578 1113 aa5.51□□□□□ -1.53
CCW14YLR390W-A YOR238WQ08634 303 aa5.51□□□□□ -1.53
CCW14YLR390W-A NSR1P27476 414 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
CCW14YLR390W-A CST9Q06032 482 aa5.49□□□□□ -1.53
CCW14YLR390W-A REV3P14284 1504 aa5.48□□□□□ -1.53
CCW14YLR390W-A MRM1P25270 412 aa5.46□□□□□ -1.54
CCW14YLR390W-A VNX1P42839 908 aa5.45□□□□□ -1.54
CCW14YLR390W-A YAP5P40574 245 aa5.44□□□□□ -1.54
CCW14YLR390W-A SPP1Q03012 353 aa5.4□□□□□ -1.54
CCW14YLR390W-A WSC3Q12215 556 aa5.37□□□□□ -1.55
CCW14YLR390W-A RTG3P38165 486 aa5.36□□□□□ -1.55
CCW14YLR390W-A PIB1Q06651 286 aa5.35□□□□□ -1.55
CCW14YLR390W-A FKH1P40466 484 aa5.34□□□□□ -1.55
CCW14YLR390W-A AIR2Q12476 344 aaKnown RBP5.34□□□□□ -1.55
CCW14YLR390W-A BUD4P47136 1447 aa5.33□□□□□ -1.56
CCW14YLR390W-A RCR1P38212 213 aa5.33□□□□□ -1.56
CCW14YLR390W-A GTT3P39996 337 aa5.33□□□□□ -1.56
CCW14YLR390W-A MDS3P53094 1487 aa5.32□□□□□ -1.56
CCW14YLR390W-A VPS29P38759 282 aa5.32□□□□□ -1.56
CCW14YLR390W-A TIF11P38912 153 aaKnown RBP5.32□□□□□ -1.56
CCW14YLR390W-A RQC2Q12532 1038 aaKnown RBP5.32□□□□□ -1.56
CCW14YLR390W-A BPT1P14772 1559 aa5.31□□□□□ -1.56
CCW14YLR390W-A YMR1P47147 688 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
CCW14YLR390W-A THO2P53552 1597 aaKnown RBP5.3□□□□□ -1.56
CCW14YLR390W-A YJL171CP46992 396 aa5.29□□□□□ -1.56
CCW14YLR390W-A DBP1P24784 617 aaKnown RBP5.28□□□□□ -1.56
CCW14YLR390W-A STS1P38637 319 aa5.27□□□□□ -1.57
CCW14YLR390W-A PEP1P32319 1579 aa5.25□□□□□ -1.57
CCW14YLR390W-A RAM2P29703 316 aa5.25□□□□□ -1.57
CCW14YLR390W-A SPT6P23615 1451 aaKnown RBP5.25□□□□□ -1.57
CCW14YLR390W-A LDB19Q12502 818 aa5.24□□□□□ -1.57
CCW14YLR390W-A LTE1P07866 1435 aa5.23□□□□□ -1.57
CCW14YLR390W-A ULI1P43604 169 aa5.23□□□□□ -1.57
CCW14YLR390W-A DNF1P32660 1571 aa5.22□□□□□ -1.57
CCW14YLR390W-A IOC2Q12072 812 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms