RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB2YNL209W SGS1P35187 1447 aa8.19□□□□□ -1.1
SSB2YNL209W INO80P53115 1489 aa7.95□□□□□ -1.14
SSB2YNL209W TCB3Q03640 1545 aaKnown RBP7.86□□□□□ -1.15
SSB2YNL209W SSN2P38931 1420 aa7.84□□□□□ -1.15
SSB2YNL209W SPA2P23201 1466 aaKnown RBP7.81□□□□□ -1.16
SSB2YNL209W TY1B-DR4Q07793 1604 aa7.78□□□□□ -1.16
SSB2YNL209W MON2P48563 1636 aaPredicted RBP7.73□□□□□ -1.17
SSB2YNL209W HSL1P34244 1518 aa7.68□□□□□ -1.18
SSB2YNL209W SPT6P23615 1451 aaKnown RBP7.65□□□□□ -1.18
SSB2YNL209W SWR1Q05471 1514 aa7.62□□□□□ -1.19
SSB2YNL209W DRS1P32892 752 aaKnown RBP7.6□□□□□ -1.19
SSB2YNL209W HIR3P47171 1648 aa7.54□□□□□ -1.2
SSB2YNL209W XRN1P22147 1528 aaKnown RBP7.51□□□□□ -1.21
SSB2YNL209W DNA2P38859 1522 aa7.41□□□□□ -1.22
SSB2YNL209W REV3P14284 1504 aa7.39□□□□□ -1.23
SSB2YNL209W RQC2Q12532 1038 aaKnown RBP7.38□□□□□ -1.23
SSB2YNL209W TAF2P23255 1407 aa7.37□□□□□ -1.23
SSB2YNL209W KOG1P38873 1557 aa7.33□□□□□ -1.24
SSB2YNL209W SIN3P22579 1536 aa7.3□□□□□ -1.24
SSB2YNL209W THO2P53552 1597 aaKnown RBP7.29□□□□□ -1.24
SSB2YNL209W SSK2P53599 1579 aa7.28□□□□□ -1.24
SSB2YNL209W ECM5Q03214 1411 aa7.26□□□□□ -1.25
SSB2YNL209W BUD4P47136 1447 aa7.25□□□□□ -1.25
SSB2YNL209W SKI3P17883 1432 aaKnown RBP7.21□□□□□ -1.25
SSB2YNL209W ESP1Q03018 1630 aa7.21□□□□□ -1.26
SSB2YNL209W ATG2P53855 1592 aa7.19□□□□□ -1.26
SSB2YNL209W MYO2P19524 1574 aaKnown RBP7.17□□□□□ -1.26
SSB2YNL209W MDS3P53094 1487 aa7.13□□□□□ -1.27
SSB2YNL209W PEP1P32319 1579 aa7.13□□□□□ -1.27
SSB2YNL209W BFR2Q06631 534 aaKnown RBP7.12□□□□□ -1.27
SSB2YNL209W STU1P38198 1513 aa7.1□□□□□ -1.27
SSB2YNL209W YPK9Q12697 1472 aa7.1□□□□□ -1.27
SSB2YNL209W POL1P13382 1468 aa7.08□□□□□ -1.28
SSB2YNL209W SCC2Q04002 1493 aa7.05□□□□□ -1.28
SSB2YNL209W BPT1P14772 1559 aa7.04□□□□□ -1.28
SSB2YNL209W MMS22Q06164 1454 aa7.04□□□□□ -1.28
SSB2YNL209W RKR1Q04781 1562 aa7.02□□□□□ -1.29
SSB2YNL209W UFD4P33202 1483 aa7.01□□□□□ -1.29
SSB2YNL209W CHD1P32657 1468 aa7□□□□□ -1.29
SSB2YNL209W SAS10Q12136 610 aaPredicted RBP6.99□□□□□ -1.29
SSB2YNL209W RPO31P04051 1460 aa6.99□□□□□ -1.29
SSB2YNL209W YOR1P53049 1477 aa6.98□□□□□ -1.29
SSB2YNL209W YTA7P40340 1379 aa6.98□□□□□ -1.29
SSB2YNL209W TOP2P06786 1428 aaKnown RBP6.96□□□□□ -1.3
SSB2YNL209W YCF1P39109 1515 aaKnown RBP6.95□□□□□ -1.3
SSB2YNL209W TY2B-LR1P0C2J3 1770 aa6.93□□□□□ -1.3
SSB2YNL209W TY2B-FP0CX63 1770 aa6.93□□□□□ -1.3
SSB2YNL209W TY2B-GR2P0CX64 1770 aa6.93□□□□□ -1.3
SSB2YNL209W TY2B-CP25384 1770 aa6.93□□□□□ -1.3
SSB2YNL209W TY2B-DR2Q03494 1770 aa6.93□□□□□ -1.3
SSB2YNL209W TY1B-DR1Q03855 1755 aa6.93□□□□□ -1.3
SSB2YNL209W TY2B-DR3Q07791 1770 aaKnown RBP6.93□□□□□ -1.3
SSB2YNL209W TY2B-OR1Q12113 1770 aa6.93□□□□□ -1.3
SSB2YNL209W TY2B-DR1Q12472 1770 aa6.93□□□□□ -1.3
SSB2YNL209W TY2B-OR2Q12501 1770 aa6.93□□□□□ -1.3
SSB2YNL209W SMC4Q12267 1418 aa6.91□□□□□ -1.3
SSB2YNL209W RSE1Q04693 1361 aaKnown RBP6.91□□□□□ -1.3
SSB2YNL209W MYO4P32492 1471 aa6.9□□□□□ -1.3
SSB2YNL209W TY1B-DR3Q99231 1755 aa6.9□□□□□ -1.31
SSB2YNL209W TY2B-BQ12491 1770 aa6.87□□□□□ -1.31
SSB2YNL209W STH1P32597 1359 aa6.85□□□□□ -1.31
SSB2YNL209W SNQ2P32568 1501 aaKnown RBP6.85□□□□□ -1.31
SSB2YNL209W SPP41P38904 1435 aa6.82□□□□□ -1.32
SSB2YNL209W TY1B-BRQ12193 1756 aa6.81□□□□□ -1.32
SSB2YNL209W TY1B-GR3Q12316 1755 aa6.81□□□□□ -1.32
SSB2YNL209W TY1B-ORQ92393 1755 aa6.81□□□□□ -1.32
SSB2YNL209W TY1B-HO13535 1793 aa6.8□□□□□ -1.32
SSB2YNL209W TY1B-DR5P0C2I2 1755 aa6.8□□□□□ -1.32
SSB2YNL209W TY1B-DR6P0C2I3 1755 aa6.8□□□□□ -1.32
SSB2YNL209W TY1B-LR2P0C2I5 1755 aa6.8□□□□□ -1.32
SSB2YNL209W TY1B-LR3P0C2I6 1755 aaKnown RBP6.8□□□□□ -1.32
SSB2YNL209W TY1B-PR1P0C2I9 1755 aaKnown RBP6.8□□□□□ -1.32
SSB2YNL209W TY1B-PR2P0C2J0 1756 aa6.8□□□□□ -1.32
SSB2YNL209W TY1B-PR3P0C2J1 1755 aaKnown RBP6.8□□□□□ -1.32
SSB2YNL209W TY1B-JR1P47098 1755 aa6.8□□□□□ -1.32
SSB2YNL209W TY1B-ML2Q03434 1755 aaKnown RBP6.8□□□□□ -1.32
SSB2YNL209W TY1B-ER1Q03612 1755 aa6.8□□□□□ -1.32
SSB2YNL209W TY1B-ML1Q04711 1755 aaKnown RBP6.8□□□□□ -1.32
SSB2YNL209W TY1B-GR2Q12269 1755 aa6.8□□□□□ -1.32
SSB2YNL209W TY1B-OLQ12273 1755 aa6.8□□□□□ -1.32
SSB2YNL209W TY1B-PLQ12414 1755 aaKnown RBP6.8□□□□□ -1.32
SSB2YNL209W TRM732Q03496 1420 aa6.8□□□□□ -1.32
SSB2YNL209W IFH1P39520 1085 aa6.8□□□□□ -1.32
SSB2YNL209W CDC25P04821 1589 aa6.79□□□□□ -1.32
SSB2YNL209W MTC1P47018 478 aaKnown RBP6.79□□□□□ -1.32
SSB2YNL209W PDR15Q04182 1529 aaKnown RBP6.78□□□□□ -1.32
SSB2YNL209W MLP2P40457 1679 aa6.78□□□□□ -1.32
SSB2YNL209W VTH1P40438 1549 aa6.76□□□□□ -1.33
SSB2YNL209W VTH2P40890 1549 aa6.76□□□□□ -1.33
SSB2YNL209W TSC11P40061 1430 aa6.76□□□□□ -1.33
SSB2YNL209W TAF7Q05021 590 aa6.76□□□□□ -1.33
SSB2YNL209W PAN1P32521 1480 aa6.76□□□□□ -1.33
SSB2YNL209W ULS1Q08562 1619 aa6.75□□□□□ -1.33
SSB2YNL209W ESC1Q03661 1658 aaKnown RBP6.74□□□□□ -1.33
SSB2YNL209W GEA1P47102 1408 aaPredicted RBP6.73□□□□□ -1.33
SSB2YNL209W IKI3Q06706 1349 aaKnown RBP6.72□□□□□ -1.33
SSB2YNL209W DNF1P32660 1571 aa6.71□□□□□ -1.33
SSB2YNL209W TY1B-JR2P47100 1755 aaKnown RBP6.69□□□□□ -1.34
SSB2YNL209W TY1B-ER2Q03619 1755 aa6.69□□□□□ -1.34
SSB2YNL209W TY1B-MR1Q04214 1755 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms