RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	MTC1	P47018	478 aa	Known RBP	8.27	□□□□□ -1.09
TFB1	YDR311W	FAP1	P53971	965 aa		7.95	□□□□□ -1.14
TFB1	YDR311W	DRS1	P32892	752 aa	Known RBP	7.82	□□□□□ -1.16
TFB1	YDR311W	PRY3	P47033	881 aa		7.48	□□□□□ -1.21
TFB1	YDR311W	PRI1	P10363	409 aa		6.91	□□□□□ -1.3
TFB1	YDR311W	HAA1	Q12753	694 aa	Known RBP	6.89	□□□□□ -1.31
TFB1	YDR311W	AAD16	Q02895	342 aa		6.88	□□□□□ -1.31
TFB1	YDR311W	YCK3	P39962	524 aa		6.86	□□□□□ -1.31
TFB1	YDR311W	DIP2	Q12220	943 aa	Predicted RBP	6.83	□□□□□ -1.32
TFB1	YDR311W	ISW2	Q08773	1120 aa		6.8	□□□□□ -1.32
TFB1	YDR311W	RPG1	P38249	964 aa	Known RBP	6.75	□□□□□ -1.33
TFB1	YDR311W	AVT3	P36062	692 aa		6.64	□□□□□ -1.35
TFB1	YDR311W	BFR2	Q06631	534 aa	Known RBP	6.57	□□□□□ -1.36
TFB1	YDR311W	RSE1	Q04693	1361 aa	Known RBP	6.56	□□□□□ -1.36
TFB1	YDR311W	TSR3	Q12094	313 aa	Known RBP	6.53	□□□□□ -1.36
TFB1	YDR311W	TFA1	P36100	482 aa		6.5	□□□□□ -1.37
TFB1	YDR311W	RPL17A	P05740	184 aa	Known RBP	6.35	□□□□□ -1.39
TFB1	YDR311W	RPL17B	P46990	184 aa	Known RBP	6.35	□□□□□ -1.39
TFB1	YDR311W	REB1	P21538	810 aa		6.28	□□□□□ -1.4
TFB1	YDR311W	MRPL32	P25348	183 aa		6.26	□□□□□ -1.41
TFB1	YDR311W	BUD31	P25337	157 aa	Predicted RBP	6.25	□□□□□ -1.41
TFB1	YDR311W	YGL015C	P33199	130 aa		6.18	□□□□□ -1.42
TFB1	YDR311W	SPT21	P35209	758 aa		6.11	□□□□□ -1.43
TFB1	YDR311W	YKR023W	P36119	530 aa	Known RBP	6.03	□□□□□ -1.44
TFB1	YDR311W	CDC27	P38042	758 aa		6	□□□□□ -1.45
TFB1	YDR311W	RIM101	P33400	625 aa		5.94	□□□□□ -1.46
TFB1	YDR311W	RQC2	Q12532	1038 aa	Known RBP	5.89	□□□□□ -1.47
TFB1	YDR311W	TFC8	Q12308	588 aa		5.89	□□□□□ -1.47
TFB1	YDR311W	HO	P09932	586 aa		5.87	□□□□□ -1.47
TFB1	YDR311W	DCD1	P06773	312 aa		5.84	□□□□□ -1.48
TFB1	YDR311W	SIS1	P25294	352 aa	Known RBP	5.8	□□□□□ -1.48
TFB1	YDR311W	UBP10	P53874	792 aa	Predicted RBP	5.79	□□□□□ -1.48
TFB1	YDR311W	MAP2	P38174	421 aa	Known RBP	5.78	□□□□□ -1.48
TFB1	YDR311W	OXP1	P28273	1286 aa		5.75	□□□□□ -1.49
TFB1	YDR311W	BCH2	P36122	765 aa		5.7	□□□□□ -1.5
TFB1	YDR311W	SCY1	P53009	804 aa		5.68	□□□□□ -1.5
TFB1	YDR311W	YIL055C	P40523	627 aa	Known RBP	5.61	□□□□□ -1.51
TFB1	YDR311W	SLX5	P32828	619 aa	Known RBP	5.6	□□□□□ -1.51
TFB1	YDR311W	PTP3	P40048	928 aa		5.58	□□□□□ -1.52
TFB1	YDR311W	UBP9	P39967	754 aa		5.58	□□□□□ -1.52
TFB1	YDR311W	DMA1	P38823	416 aa		5.57	□□□□□ -1.52
TFB1	YDR311W	EPS1	P40557	701 aa		5.56	□□□□□ -1.52
TFB1	YDR311W	RSM7	P47150	247 aa		5.55	□□□□□ -1.52
TFB1	YDR311W	TGL3	P40308	642 aa		5.54	□□□□□ -1.52
TFB1	YDR311W	YAH1	Q12184	172 aa	Known RBP	5.54	□□□□□ -1.52
TFB1	YDR311W	BDF1	P35817	686 aa		5.54	□□□□□ -1.52
TFB1	YDR311W	TIF4632	P39936	914 aa	Known RBP	5.53	□□□□□ -1.52
TFB1	YDR311W	YLR271W	Q06152	274 aa		5.5	□□□□□ -1.53
TFB1	YDR311W	AI2	P03876	854 aa		5.48	□□□□□ -1.53
TFB1	YDR311W	TAF7	Q05021	590 aa		5.46	□□□□□ -1.53
TFB1	YDR311W	BBC1	P47068	1157 aa		5.46	□□□□□ -1.54
TFB1	YDR311W	SSP1	P38871	571 aa		5.44	□□□□□ -1.54
TFB1	YDR311W	PSD2	P53037	1138 aa	Known RBP	5.4	□□□□□ -1.55
TFB1	YDR311W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.36	□□□□□ -1.55	not detected
TFB1	YDR311W	MST1	P07236	462 aa		5.35	□□□□□ -1.55
TFB1	YDR311W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.34	□□□□□ -1.55	not detected
TFB1	YDR311W	YOR238W	Q08634	303 aa		5.31	□□□□□ -1.56
TFB1	YDR311W	CST9	Q06032	482 aa		5.3	□□□□□ -1.56
TFB1	YDR311W	MGA2	P40578	1113 aa		5.29	□□□□□ -1.56
TFB1	YDR311W	MRM1	P25270	412 aa		5.29	□□□□□ -1.56
TFB1	YDR311W	YAP5	P40574	245 aa		5.28	□□□□□ -1.56
TFB1	YDR311W	LEO1	P38439	464 aa		5.27	□□□□□ -1.57
TFB1	YDR311W	VPS29	P38759	282 aa		5.21	□□□□□ -1.58
TFB1	YDR311W	RTG3	P38165	486 aa		5.19	□□□□□ -1.58
TFB1	YDR311W	YBL029C-A	Q3E756	94 aa		5.19	□□□□□ -1.58
TFB1	YDR311W	VNX1	P42839	908 aa		5.17	□□□□□ -1.58
TFB1	YDR311W	RCR1	P38212	213 aa		5.17	□□□□□ -1.58
TFB1	YDR311W	PIB1	Q06651	286 aa		5.17	□□□□□ -1.58
TFB1	YDR311W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.58	not detected
TFB1	YDR311W	DBP1	P24784	617 aa	Known RBP	5.14	□□□□□ -1.59
TFB1	YDR311W	WSC3	Q12215	556 aa		5.13	□□□□□ -1.59
TFB1	YDR311W	STS1	P38637	319 aa		5.13	□□□□□ -1.59
TFB1	YDR311W	GTT3	P39996	337 aa		5.13	□□□□□ -1.59
TFB1	YDR311W	YFR006W	P43590	535 aa		5.11	□□□□□ -1.59
TFB1	YDR311W	SPP1	Q03012	353 aa		5.09	□□□□□ -1.59
TFB1	YDR311W	SAS10	Q12136	610 aa	Predicted RBP	5.09	□□□□□ -1.59
TFB1	YDR311W	TIF11	P38912	153 aa	Known RBP	5.08	□□□□□ -1.6
TFB1	YDR311W	LEU3	P08638	886 aa		5.07	□□□□□ -1.6
TFB1	YDR311W	VMA1	P17255	1071 aa	Known RBP	5.07	□□□□□ -1.6
TFB1	YDR311W	YJL171C	P46992	396 aa		5.06	□□□□□ -1.6
TFB1	YDR311W	RAM2	P29703	316 aa		5.05	□□□□□ -1.6
TFB1	YDR311W	SAM3	Q08986	587 aa		5.05	□□□□□ -1.6
TFB1	YDR311W	YOL036W	Q08206	761 aa		5.04	□□□□□ -1.6
TFB1	YDR311W	IOC2	Q12072	812 aa		5.04	□□□□□ -1.6
TFB1	YDR311W	MSB4	Q12317	492 aa		5.04	□□□□□ -1.6
TFB1	YDR311W	ULI1	P43604	169 aa		5.03	□□□□□ -1.6
TFB1	YDR311W	SET4	P42948	560 aa		5.02	□□□□□ -1.61
TFB1	YDR311W	MAK11	P20484	414 aa	Known RBP	5	□□□□□ -1.61
TFB1	YDR311W	EAP1	P36041	632 aa	Known RBP	5	□□□□□ -1.61
TFB1	YDR311W	FKH1	P40466	484 aa		4.99	□□□□□ -1.61
TFB1	YDR311W	AIR2	Q12476	344 aa	Known RBP	4.99	□□□□□ -1.61
TFB1	YDR311W	LDB19	Q12502	818 aa		4.99	□□□□□ -1.61
TFB1	YDR311W	TRP5	P00931	707 aa	Known RBP	4.98	□□□□□ -1.61
TFB1	YDR311W	GYP5	Q12344	894 aa		4.97	□□□□□ -1.61
TFB1	YDR311W	EDS1	P38073	919 aa		4.96	□□□□□ -1.62
TFB1	YDR311W	MIF2	P35201	549 aa		4.94	□□□□□ -1.62
TFB1	YDR311W	DMA2	P53924	522 aa		4.94	□□□□□ -1.62
TFB1	YDR311W	RGA2	Q06407	1009 aa		4.94	□□□□□ -1.62
TFB1	YDR311W	COQ8	P27697	501 aa		4.93	□□□□□ -1.62
TFB1	YDR311W	ABP1	P15891	592 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms