RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W RQC2Q12532 1038 aaKnown RBP7.38□□□□□ -1.23
SSB1YDL229W BFR2Q06631 534 aaKnown RBP7.12□□□□□ -1.27
SSB1YDL229W TAF7Q05021 590 aa6.64□□□□□ -1.35
SSB1YDL229W URN1Q06525 465 aaKnown RBP6.6□□□□□ -1.35
SSB1YDL229W EBP2P36049 427 aaKnown RBP6.32□□□□□ -1.4
SSB1YDL229W SIS2P36024 562 aa6.32□□□□□ -1.4
SSB1YDL229W CAB3P36076 571 aa6.25□□□□□ -1.41
SSB1YDL229W TFA1P36100 482 aa6.24□□□□□ -1.41
SSB1YDL229W NOP2P40991 618 aaKnown RBP6.23□□□□□ -1.41
SSB1YDL229W AVT3P36062 692 aa6.17□□□□□ -1.42
SSB1YDL229W YFR016CP43597 1233 aaKnown RBP6.16□□□□□ -1.42
SSB1YDL229W DRS1P32892 752 aaKnown RBP6.05□□□□□ -1.44
SSB1YDL229W RPS0BP46654 252 aaKnown RBP5.99□□□□□ -1.45
SSB1YDL229W KRI1P42846 591 aaKnown RBP5.98□□□□□ -1.45
SSB1YDL229W DIP2Q12220 943 aaPredicted RBP5.98□□□□□ -1.45
SSB1YDL229W YRB30P53107 440 aaPredicted RBP5.96□□□□□ -1.46
SSB1YDL229W IOC4Q04213 475 aa5.96□□□□□ -1.46
SSB1YDL229W YPR148CQ06523 435 aa5.94□□□□□ -1.46
SSB1YDL229W NAP1P25293 417 aaKnown RBP5.92□□□□□ -1.46
SSB1YDL229W CWC22P53333 577 aaKnown RBP5.91□□□□□ -1.46
SSB1YDL229W NSR1P27476 414 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
SSB1YDL229W ENV11P53246 860 aa5.72□□□□□ -1.49
SSB1YDL229W RSE1Q04693 1361 aaKnown RBP5.72□□□□□ -1.49
SSB1YDL229W DEF1P35732 738 aaKnown RBP5.71□□□□□ -1.49
SSB1YDL229W LEO1P38439 464 aa5.71□□□□□ -1.5
SSB1YDL229W PSH1Q12161 406 aa5.71□□□□□ -1.5
SSB1YDL229W MNN4P36044 1178 aa5.69□□□□□ -1.5
SSB1YDL229W SNU71P53207 620 aaKnown RBP5.66□□□□□ -1.5
SSB1YDL229W RLP24Q07915 199 aaKnown RBP5.65□□□□□ -1.5
SSB1YDL229W SGS1P35187 1447 aa5.65□□□□□ -1.5
SSB1YDL229W IFH1P39520 1085 aa5.64□□□□□ -1.51
SSB1YDL229W TCB2P48231 1178 aa5.64□□□□□ -1.51
SSB1YDL229W NUG1P40010 520 aaKnown RBP5.63□□□□□ -1.51
SSB1YDL229W MON2P48563 1636 aaPredicted RBP5.63□□□□□ -1.51
SSB1YDL229W AIM44Q99299 758 aa5.62□□□□□ -1.51
SSB1YDL229W SPT7P35177 1332 aa5.61□□□□□ -1.51
SSB1YDL229W DMA1P38823 416 aa5.6□□□□□ -1.51
SSB1YDL229W MDG1P53885 366 aa5.6□□□□□ -1.51
SSB1YDL229W INO80P53115 1489 aa5.6□□□□□ -1.51
SSB1YDL229W TOP1P04786 769 aa5.6□□□□□ -1.51
SSB1YDL229W ORC1P54784 914 aaPredicted RBP5.6□□□□□ -1.51
SSB1YDL229W NOP53Q12080 455 aaKnown RBP5.58□□□□□ -1.52
SSB1YDL229W TCB3Q03640 1545 aaKnown RBP5.57□□□□□ -1.52
SSB1YDL229W SPT2P06843 333 aaPredicted RBP5.55□□□□□ -1.52
SSB1YDL229W SPT21P35209 758 aa5.55□□□□□ -1.52
SSB1YDL229W TY1B-DR4Q07793 1604 aa5.54□□□□□ -1.52
SSB1YDL229W RLF2Q12495 606 aa5.53□□□□□ -1.52
SSB1YDL229W YGR130CP53278 816 aa5.52□□□□□ -1.53
SSB1YDL229W TIF4632P39936 914 aaKnown RBP5.51□□□□□ -1.53
SSB1YDL229W FPR4Q06205 392 aaPredicted RBP5.49□□□□□ -1.53
SSB1YDL229W RPN1P38764 993 aaKnown RBP5.48□□□□□ -1.53
SSB1YDL229W FPR3P38911 411 aaKnown RBP5.48□□□□□ -1.53
SSB1YDL229W GRX3Q03835 250 aa5.48□□□□□ -1.53
SSB1YDL229W HSP82P02829 709 aaKnown RBP5.47□□□□□ -1.53
SSB1YDL229W ENP1P38333 483 aaKnown RBP5.46□□□□□ -1.53
SSB1YDL229W PLP2Q12017 286 aa5.46□□□□□ -1.53
SSB1YDL229W HIF1Q12373 385 aa5.46□□□□□ -1.53
SSB1YDL229W SWR1Q05471 1514 aa5.46□□□□□ -1.54
SSB1YDL229W RNA1P11745 407 aaKnown RBP5.46□□□□□ -1.54
SSB1YDL229W QCR6P00127 147 aa5.44□□□□□ -1.54
SSB1YDL229W SSA1P10591 642 aaKnown RBP5.44□□□□□ -1.54
SSB1YDL229W SSA2P10592 639 aaKnown RBP5.44□□□□□ -1.54
SSB1YDL229W TOA1P32773 286 aa5.44□□□□□ -1.54
SSB1YDL229W GIN4Q12263 1142 aa5.44□□□□□ -1.54
SSB1YDL229W SEC3P33332 1336 aaKnown RBP5.44□□□□□ -1.54
SSB1YDL229W SWE1P32944 819 aa5.44□□□□□ -1.54
SSB1YDL229W NHA1Q99271 985 aa5.44□□□□□ -1.54
SSB1YDL229W FAP1P53971 965 aa5.43□□□□□ -1.54
SSB1YDL229W YNL011CP53980 444 aa5.43□□□□□ -1.54
SSB1YDL229W FUN12P39730 1002 aaKnown RBP5.42□□□□□ -1.54
SSB1YDL229W SUB1P54000 292 aaKnown RBP5.42□□□□□ -1.54
SSB1YDL229W TLG1Q03322 224 aa5.42□□□□□ -1.54
SSB1YDL229W YTA7P40340 1379 aa5.42□□□□□ -1.54
SSB1YDL229W SPC110P32380 944 aa5.41□□□□□ -1.54
SSB1YDL229W RPS0AP32905 252 aaKnown RBP5.41□□□□□ -1.54
SSB1YDL229W HSL1P34244 1518 aa5.41□□□□□ -1.54
SSB1YDL229W CLC1P17891 233 aa5.39□□□□□ -1.55
SSB1YDL229W PIL1P53252 339 aaKnown RBP5.39□□□□□ -1.55
SSB1YDL229W NMD2P38798 1089 aaKnown RBP5.39□□□□□ -1.55
SSB1YDL229W VPS4P52917 437 aa5.39□□□□□ -1.55
SSB1YDL229W SPT6P23615 1451 aaKnown RBP5.38□□□□□ -1.55
SSB1YDL229W ETT1Q08421 412 aaKnown RBP5.38□□□□□ -1.55
SSB1YDL229W SPT16P32558 1035 aaKnown RBP5.37□□□□□ -1.55
SSB1YDL229W RIX1P38883 763 aaPredicted RBP5.37□□□□□ -1.55
SSB1YDL229W ABP1P15891 592 aaKnown RBP5.36□□□□□ -1.55
SSB1YDL229W SKI3P17883 1432 aaKnown RBP5.36□□□□□ -1.55
SSB1YDL229W ATG36P46983 293 aa5.35□□□□□ -1.55
SSB1YDL229W TPO2P53283 614 aa5.35□□□□□ -1.55
SSB1YDL229W SSN2P38931 1420 aa5.35□□□□□ -1.55
SSB1YDL229W BRL1P38770 471 aa5.34□□□□□ -1.55
SSB1YDL229W SPA2P23201 1466 aaKnown RBP5.34□□□□□ -1.55
SSB1YDL229W DNA2P38859 1522 aa5.34□□□□□ -1.55
SSB1YDL229W ISW1P38144 1129 aa5.34□□□□□ -1.55
SSB1YDL229W YSH1Q06224 779 aaPredicted RBP5.33□□□□□ -1.56
SSB1YDL229W IME2P32581 645 aa5.32□□□□□ -1.56
SSB1YDL229W DOS2P54858 310 aa5.32□□□□□ -1.56
SSB1YDL229W MCM1P11746 286 aa5.32□□□□□ -1.56
SSB1YDL229W BRN1P38170 754 aa5.31□□□□□ -1.56
SSB1YDL229W MTC1P47018 478 aaKnown RBP5.31□□□□□ -1.56
SSB1YDL229W MPP10P47083 593 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms