RNA–Protein interactions for RNA: YPL253C

VIK1, Transcript of Protein that forms a kinesin-14 heterodimeric motor with Kar3p, yeastyeast

Gene VIK1, Length 1,944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VIK1YPL253C MTC1P47018 478 aaKnown RBP10.42□□□□□ -0.74
VIK1YPL253C FAP1P53971 965 aa10.09□□□□□ -0.79
VIK1YPL253C PRY3P47033 881 aa9.52□□□□□ -0.89
VIK1YPL253C PRI1P10363 409 aa9.16□□□□□ -0.94
VIK1YPL253C AAD16Q02895 342 aa9.16□□□□□ -0.94
VIK1YPL253C DRS1P32892 752 aaKnown RBP9.09□□□□□ -0.95
VIK1YPL253C YCK3P39962 524 aa9.05□□□□□ -0.96
VIK1YPL253C HAA1Q12753 694 aaKnown RBP8.87□□□□□ -0.99
VIK1YPL253C ISW2Q08773 1120 aa8.74□□□□□ -1.01
VIK1YPL253C RPG1P38249 964 aaKnown RBP8.72□□□□□ -1.01
VIK1YPL253C TSR3Q12094 313 aaKnown RBP8.63□□□□□ -1.03
VIK1YPL253C MRPL32P25348 183 aa8.25□□□□□ -1.09
VIK1YPL253C DIP2Q12220 943 aaPredicted RBP8.22□□□□□ -1.09
VIK1YPL253C YGL015CP33199 130 aa8.1□□□□□ -1.11
VIK1YPL253C RSE1Q04693 1361 aaKnown RBP8.09□□□□□ -1.11
VIK1YPL253C REB1P21538 810 aa7.89□□□□□ -1.15
VIK1YPL253C RPL17AP05740 184 aaKnown RBP7.88□□□□□ -1.15
VIK1YPL253C RPL17BP46990 184 aaKnown RBP7.88□□□□□ -1.15
VIK1YPL253C CDC27P38042 758 aa7.78□□□□□ -1.16
VIK1YPL253C AVT3P36062 692 aa7.76□□□□□ -1.17
VIK1YPL253C BUD31P25337 157 aaPredicted RBP7.72□□□□□ -1.17
VIK1YPL253C YKR023WP36119 530 aaKnown RBP7.61□□□□□ -1.19
VIK1YPL253C MAP2P38174 421 aaKnown RBP7.6□□□□□ -1.19
VIK1YPL253C UBP10P53874 792 aaPredicted RBP7.58□□□□□ -1.2
VIK1YPL253C SPT21P35209 758 aa7.53□□□□□ -1.2
VIK1YPL253C DCD1P06773 312 aa7.46□□□□□ -1.22
VIK1YPL253C HOP09932 586 aa7.44□□□□□ -1.22
VIK1YPL253C TFC8Q12308 588 aa7.44□□□□□ -1.22
VIK1YPL253C SCY1P53009 804 aa7.32□□□□□ -1.24
VIK1YPL253C TIF4632P39936 914 aaKnown RBP7.27□□□□□ -1.25
VIK1YPL253C TGL3P40308 642 aa7.27□□□□□ -1.25
VIK1YPL253C SIS1P25294 352 aaKnown RBP7.25□□□□□ -1.25
VIK1YPL253C SLX5P32828 619 aaKnown RBP7.24□□□□□ -1.25
VIK1YPL253C BFR2Q06631 534 aaKnown RBP7.23□□□□□ -1.25
VIK1YPL253C UBP9P39967 754 aa7.21□□□□□ -1.26
VIK1YPL253C BCH2P36122 765 aa7.18□□□□□ -1.26
VIK1YPL253C RIM101P33400 625 aa7.12□□□□□ -1.27
VIK1YPL253C BDF1P35817 686 aa6.93□□□□□ -1.3
VIK1YPL253C EPS1P40557 701 aa6.93□□□□□ -1.3
VIK1YPL253C MST1P07236 462 aa6.92□□□□□ -1.3
VIK1YPL253C YBL029C-AQ3E756 94 aa6.9□□□□□ -1.3
VIK1YPL253C OXP1P28273 1286 aa6.88□□□□□ -1.31
VIK1YPL253C YOR238WQ08634 303 aa6.83□□□□□ -1.32
VIK1YPL253C VNX1P42839 908 aa6.8□□□□□ -1.32
VIK1YPL253C NSR1P27476 414 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
VIK1YPL253C PTP3P40048 928 aa6.75□□□□□ -1.33
VIK1YPL253C YIL055CP40523 627 aaKnown RBP6.72□□□□□ -1.33
VIK1YPL253C SPP1Q03012 353 aa6.71□□□□□ -1.34
VIK1YPL253C YAP5P40574 245 aa6.69□□□□□ -1.34
VIK1YPL253C WSC3Q12215 556 aa6.68□□□□□ -1.34
VIK1YPL253C AIR2Q12476 344 aaKnown RBP6.66□□□□□ -1.34
VIK1YPL253C BBC1P47068 1157 aa6.66□□□□□ -1.34
VIK1YPL253C AI2P03876 854 aa6.65□□□□□ -1.34
VIK1YPL253C RSM7P47150 247 aa6.64□□□□□ -1.35
VIK1YPL253C FKH1P40466 484 aa6.6□□□□□ -1.35
VIK1YPL253C TIF11P38912 153 aaKnown RBP6.6□□□□□ -1.35
VIK1YPL253C YJL171CP46992 396 aa6.58□□□□□ -1.36
VIK1YPL253C YAH1Q12184 172 aaKnown RBP6.56□□□□□ -1.36
VIK1YPL253C GTT3P39996 337 aa6.52□□□□□ -1.37
VIK1YPL253C LDB19Q12502 818 aa6.52□□□□□ -1.37
VIK1YPL253C IOC2Q12072 812 aa6.51□□□□□ -1.37
VIK1YPL253C ULI1P43604 169 aa6.49□□□□□ -1.37
VIK1YPL253C PIB1Q06651 286 aa6.48□□□□□ -1.37
VIK1YPL253C BMT6Q12291 365 aa6.46□□□□□ -1.38
VIK1YPL253C YLR271WQ06152 274 aa6.45□□□□□ -1.38
VIK1YPL253C PSD2P53037 1138 aaKnown RBP6.42□□□□□ -1.38
VIK1YPL253C MRM1P25270 412 aa6.37□□□□□ -1.39
VIK1YPL253C MSB4Q12317 492 aa6.37□□□□□ -1.39
VIK1YPL253C RTG1P32607 177 aa6.34□□□□□ -1.39
VIK1YPL253C EAP1P36041 632 aaKnown RBP6.34□□□□□ -1.39
VIK1YPL253C TRP5P00931 707 aaKnown RBP6.33□□□□□ -1.4
VIK1YPL253C SET4P42948 560 aa6.33□□□□□ -1.4
VIK1YPL253C YOL036WQ08206 761 aa6.33□□□□□ -1.4
VIK1YPL253C NCR1Q12200 1170 aa6.32□□□□□ -1.4
VIK1YPL253C DBP1P24784 617 aaKnown RBP6.27□□□□□ -1.41
VIK1YPL253C VPS29P38759 282 aa6.27□□□□□ -1.41
VIK1YPL253C YMR1P47147 688 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
VIK1YPL253C YNL035CP53962 389 aaKnown RBP6.26□□□□□ -1.41
VIK1YPL253C SEC61P32915 480 aa6.25□□□□□ -1.41
VIK1YPL253C YFR006WP43590 535 aa6.24□□□□□ -1.41
VIK1YPL253C VMA1P17255 1071 aaKnown RBP6.23□□□□□ -1.41
VIK1YPL253C STS1P38637 319 aa6.22□□□□□ -1.41
VIK1YPL253C SAM3Q08986 587 aa6.21□□□□□ -1.42
VIK1YPL253C CST9Q06032 482 aa6.2□□□□□ -1.42
VIK1YPL253C DAN4P47179 1161 aa6.19□□□□□ -1.42
VIK1YPL253C RTG3P38165 486 aa6.18□□□□□ -1.42
VIK1YPL253C SAP30P38429 201 aa6.16□□□□□ -1.42
VIK1YPL253C SSP1P38871 571 aa6.16□□□□□ -1.42
VIK1YPL253C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
VIK1YPL253C TFA1P36100 482 aa6.15□□□□□ -1.42
VIK1YPL253C TFG1P41895 735 aaPredicted RBP6.15□□□□□ -1.43
VIK1YPL253C BCK2P33306 851 aa6.13□□□□□ -1.43
VIK1YPL253C RCR1P38212 213 aa6.13□□□□□ -1.43
VIK1YPL253C JIP4Q03361 876 aa6.11□□□□□ -1.43
VIK1YPL253C CHL1P22516 861 aaPredicted RBP6.11□□□□□ -1.43
VIK1YPL253C MGA2P40578 1113 aa6.1□□□□□ -1.43
VIK1YPL253C YDL129WQ07555 291 aa6.1□□□□□ -1.43
VIK1YPL253C GYP5Q12344 894 aa6.08□□□□□ -1.44
VIK1YPL253C PRE3P38624 215 aa6.07□□□□□ -1.44
VIK1YPL253C PTC4P38089 393 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms