Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 MAP3K4-207ENST00000490904 5451 ntTSL 1 (best)16.24■□□□□ 0.198e-6■□□□□ 10.2
XRCC6P12956 CXXC5-207ENST00000504944 568 ntTSL 315.89■□□□□ 0.138e-6■□□□□ 10.2
XRCC6P12956 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.138e-6■□□□□ 10.2
XRCC6P12956 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.128e-6■□□□□ 10.2
XRCC6P12956 ADAM10-215ENST00000560608 587 ntTSL 415.67■□□□□ 0.18e-6■□□□□ 10.2
XRCC6P12956 ADAM10-204ENST00000439637 601 ntTSL 315.45■□□□□ 0.068e-6■□□□□ 10.2
XRCC6P12956 LZTR1-210ENST00000464807 566 ntTSL 215.08■□□□□ 08e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-210ENST00000491064 786 ntTSL 315.03■□□□□ -08e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-208ENST00000482272 984 ntTSL 214.98□□□□□ -0.018e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-212ENST00000494067 362 ntTSL 314.88□□□□□ -0.038e-6■□□□□ 10.2
XRCC6P12956 KLHL20-202ENST00000479505 450 ntTSL 214.82□□□□□ -0.048e-6■□□□□ 10.2
XRCC6P12956 LZTR1-209ENST00000463909 3505 ntTSL 1 (best)14.78□□□□□ -0.048e-6■□□□□ 10.2
XRCC6P12956 SAFB-210ENST00000591991 3471 ntTSL 214.65□□□□□ -0.068e-6■□□□□ 10.2
XRCC6P12956 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.078e-6■□□□□ 10.2
XRCC6P12956 CTDSP1-206ENST00000464255 926 ntTSL 514.59□□□□□ -0.078e-6■□□□□ 10.2
XRCC6P12956 LZTR1-207ENST00000452988 878 ntTSL 313.58□□□□□ -0.248e-6■□□□□ 10.2
XRCC6P12956 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.258e-6■□□□□ 10.2
XRCC6P12956 LTBP4-238ENST00000622457 547 ntTSL 213.17□□□□□ -0.38e-6■□□□□ 10.2
XRCC6P12956 KLHL20-201ENST00000209884 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.418e-6■□□□□ 10.2
XRCC6P12956 LZTR1-203ENST00000415354 648 ntTSL 312.39□□□□□ -0.438e-6■□□□□ 10.2
XRCC6P12956 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.478e-6■□□□□ 10.2
XRCC6P12956 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.58e-6■□□□□ 10.2
XRCC6P12956 PRPF38A-202ENST00000474048 1059 ntTSL 1 (best)11.42□□□□□ -0.588e-6■□□□□ 10.2
XRCC6P12956 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.668e-6■□□□□ 10.2
XRCC6P12956 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC10.91□□□□□ -0.668e-6■□□□□ 10.2
XRCC6P12956 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.718e-6■□□□□ 10.2
XRCC6P12956 CENPE-203ENST00000503705 3468 ntTSL 210.45□□□□□ -0.748e-6■□□□□ 10.2
XRCC6P12956 ADAM10-214ENST00000559053 541 ntTSL 49.65□□□□□ -0.868e-6■□□□□ 10.2
XRCC6P12956 DNAJC8-206ENST00000603289 483 ntTSL 59.11□□□□□ -0.958e-6■□□□□ 10.2
XRCC6P12956 RNA5SP355-201ENST00000365317 135 ntBASIC7.85□□□□□ -1.158e-6■□□□□ 10.2
XRCC6P12956 CCDC91-203ENST00000535520 1626 ntTSL 27.28□□□□□ -1.248e-6■□□□□ 10.2
XRCC6P12956 ADAM10-211ENST00000497846 647 ntTSL 47.23□□□□□ -1.258e-6■□□□□ 10.2
XRCC6P12956 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.418e-6■□□□□ 10.2
XRCC6P12956 DNAJC8-202ENST00000470967 560 ntTSL 26.26□□□□□ -1.418e-6■□□□□ 10.2
XRCC6P12956 CCDC91-213ENST00000542801 502 ntTSL 46.16□□□□□ -1.428e-6■□□□□ 10.2
XRCC6P12956 CCDC91-217ENST00000543809 1667 ntTSL 1 (best)6.11□□□□□ -1.438e-6■□□□□ 10.2
XRCC6P12956 NOM1-202ENST00000460332 706 ntTSL 35.04□□□□□ -1.68e-6■□□□□ 10.2
XRCC6P12956 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.658e-6■□□□□ 10.2
XRCC6P12956 CCDC91-210ENST00000540401 1439 ntTSL 1 (best)4.59□□□□□ -1.678e-6■□□□□ 10.2
XRCC6P12956 MAP3K4-205ENST00000446500 326 ntTSL 34.28□□□□□ -1.728e-6■□□□□ 10.2
XRCC6P12956 RBM14-209ENST00000512283 567 ntTSL 420.47■□□□□ 0.874e-8■□□□□ 10.2
XRCC6P12956 RPS3-208ENST00000527273 390 ntTSL 312.83□□□□□ -0.362e-11■□□□□ 10.2
XRCC6P12956 FGFR3-209ENST00000507588 336 ntTSL 1 (best)20.83■□□□□ 0.937e-6■□□□□ 10.2
XRCC6P12956 FGFR3-207ENST00000474521 545 ntTSL 219.77■□□□□ 0.767e-6■□□□□ 10.2
XRCC6P12956 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.786e-6■□□□□ 10.2
XRCC6P12956 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.63■■□□□ 1.052e-7■□□□□ 10.2
XRCC6P12956 LTB4R-204ENST00000553481 431 ntTSL 215.09■□□□□ 0.016e-6■□□□□ 10.2
XRCC6P12956 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC14.9□□□□□ -0.022e-7■□□□□ 10.2
XRCC6P12956 DYNC1LI2-208ENST00000564833 727 ntTSL 412.78□□□□□ -0.367e-9■□□□□ 10.2
XRCC6P12956 LINC00511-214ENST00000581801 379 ntTSL 312.22□□□□□ -0.452e-7■□□□□ 10.2
XRCC6P12956 LINC00511-210ENST00000580861 467 ntTSL 49.94□□□□□ -0.822e-7■□□□□ 10.2
XRCC6P12956 DYNC1LI2-211ENST00000567499 3994 ntTSL 28.86□□□□□ -0.997e-9■□□□□ 10.2
XRCC6P12956 NPLOC4-215ENST00000574095 277 ntTSL 328.99■■■□□ 2.232e-8■□□□□ 10.2
XRCC6P12956 NPLOC4-217ENST00000574897 2365 ntTSL 228.47■■■□□ 2.152e-8■□□□□ 10.2
XRCC6P12956 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.232e-8■□□□□ 10.2
XRCC6P12956 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC14.05□□□□□ -0.162e-8■□□□□ 10.2
XRCC6P12956 NPLOC4-203ENST00000570300 565 ntTSL 412.38□□□□□ -0.432e-8■□□□□ 10.2
XRCC6P12956 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.874e-6■□□□□ 10.2
XRCC6P12956 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.114e-6■□□□□ 10.2
XRCC6P12956 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.144e-6■□□□□ 10.2
XRCC6P12956 FAM76B-212ENST00000545654 2001 ntTSL 230.05■■■□□ 2.42e-8■□□□□ 10.1
XRCC6P12956 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.66■■■□□ 2.022e-8■□□□□ 10.1
XRCC6P12956 FAM76B-207ENST00000538316 585 ntTSL 525.69■■□□□ 1.72e-8■□□□□ 10.1
XRCC6P12956 SIRT7-210ENST00000572902 909 ntTSL 323.96■■□□□ 1.432e-8■□□□□ 10.1
XRCC6P12956 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.32e-8■□□□□ 10.1
XRCC6P12956 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.022e-8■□□□□ 10.1
XRCC6P12956 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.64■□□□□ 0.92e-8■□□□□ 10.1
XRCC6P12956 FAM76B-210ENST00000542135 610 ntTSL 218.63■□□□□ 0.572e-8■□□□□ 10.1
XRCC6P12956 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.532e-8■□□□□ 10.1
XRCC6P12956 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC18.3■□□□□ 0.522e-8■□□□□ 10.1
XRCC6P12956 HDDC2-201ENST00000318787 1350 ntTSL 1 (best)17.84■□□□□ 0.452e-8■□□□□ 10.1
XRCC6P12956 CPSF1-205ENST00000531042 580 ntTSL 517.55■□□□□ 0.42e-8■□□□□ 10.1
XRCC6P12956 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.5■□□□□ 0.392e-8■□□□□ 10.1
XRCC6P12956 HDDC2-210ENST00000609574 607 ntTSL 217.5■□□□□ 0.392e-8■□□□□ 10.1
XRCC6P12956 AGO3-207ENST00000634486 3599 ntTSL 517.39■□□□□ 0.372e-8■□□□□ 10.1
XRCC6P12956 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.212e-8■□□□□ 10.1
XRCC6P12956 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.04■□□□□ 0.162e-8■□□□□ 10.1
XRCC6P12956 HDDC2-206ENST00000608461 587 ntTSL 216.01■□□□□ 0.152e-8■□□□□ 10.1
XRCC6P12956 HDDC2-209ENST00000609477 564 ntTSL 416.01■□□□□ 0.152e-8■□□□□ 10.1
XRCC6P12956 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.152e-8■□□□□ 10.1
XRCC6P12956 FAM76B-208ENST00000540054 730 ntTSL 215.63■□□□□ 0.092e-8■□□□□ 10.1
XRCC6P12956 AGO3-206ENST00000491443 548 ntTSL 212.54□□□□□ -0.42e-8■□□□□ 10.1
XRCC6P12956 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.23□□□□□ -1.412e-8■□□□□ 10.1
XRCC6P12956 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.452e-8■□□□□ 10.1
XRCC6P12956 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.151e-6■□□□□ 10.1
XRCC6P12956 LINC01029-203ENST00000582805 788 ntTSL 1 (best)16.23■□□□□ 0.197e-18■□□□□ 10.1
XRCC6P12956 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.81■□□□□ 0.127e-18■□□□□ 10.1
XRCC6P12956 PRPF38B-204ENST00000467302 2043 ntTSL 1 (best)18.37■□□□□ 0.531e-12■□□□□ 10.1
XRCC6P12956 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.4■□□□□ 0.381e-12■□□□□ 10.1
XRCC6P12956 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.861e-7■□□□□ 10
XRCC6P12956 PTCD3-203ENST00000409783 587 ntTSL 525■■□□□ 1.591e-7■□□□□ 10
XRCC6P12956 PTCD3-202ENST00000409326 522 ntTSL 422.68■■□□□ 1.221e-7■□□□□ 10
XRCC6P12956 PTCD3-206ENST00000465560 747 ntTSL 322.68■■□□□ 1.221e-7■□□□□ 10
XRCC6P12956 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.121e-7■□□□□ 10
XRCC6P12956 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.85■■□□□ 1.091e-7■□□□□ 10
XRCC6P12956 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.96■□□□□ 0.951e-7■□□□□ 10
XRCC6P12956 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.951e-7■□□□□ 10
XRCC6P12956 PTCD3-204ENST00000418628 532 ntTSL 420.85■□□□□ 0.931e-7■□□□□ 10
XRCC6P12956 PTCD3-217ENST00000488801 568 ntTSL 420.85■□□□□ 0.931e-7■□□□□ 10
XRCC6P12956 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.831e-7■□□□□ 10
Retrieved 100 of 6,788 protein–RNA pairs in 277.6 ms